RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 C14orf177Q52M58 125 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 ZNF501Q96CX3 271 aaPredicted RBP2.76□□□□□ -1.97
USP53-205ENST00000509769 PPDPFQ9H3Y8 114 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 ZNF706Q9Y5V0 76 aaPredicted RBP2.76□□□□□ -1.97
USP53-205ENST00000509769 SCN1AP35498 2009 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 DOCK3Q8IZD9 2030 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 IGHV3-72A0A0B4J1Y9 119 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 NEXN-AS1Q8NBZ9 246 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 MCRIP2Q9BUT9 160 aaKnown RBP2.76□□□□□ -1.97
USP53-205ENST00000509769 C19orf71A6NCJ1 209 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 CELA3BP08861 270 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 EFNA4P52798 201 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 FAM120AOSQ5T036 256 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 NFE4Q86UQ8 179 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 C20orf203Q8NBC4 194 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 AVPP01185 164 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 APOC4P55056 127 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 DEFB109BQ30KR1 87 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 CYYR1Q96J86 154 aa2.76□□□□□ -1.97
USP53-205ENST00000509769 TNRC6AQ8NDV7 1962 aaKnown RBP2.76□□□□□ -1.97
USP53-205ENST00000509769 MYO18AQ92614 2054 aaKnown RBP2.75□□□□□ -1.97
USP53-205ENST00000509769 DKK1O94907 266 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 IGHV3-30P01768 117 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 IGHV1-8P0DP01 117 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 IGHV3-30-5P0DP03 117 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 SAA4P35542 130 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 LINC00269Q8N2A0 174 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 TP53AIP1Q9HCN2 124 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 A0A087WZ39 114 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 IGF1P05019 195 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 APELAP0DMC3 54 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 IGHV3-30-3P0DP02 117 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 GATA4P43694 442 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 C4orf48Q5BLP8 95 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 ATP1A1-AS1Q5TC04 95 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 Q6ZRM9 215 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 LINC00173Q6ZV60 143 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 SBSPONQ8IVN8 264 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 TMEM263Q8WUH6 116 aaKnown RBP2.75□□□□□ -1.97
USP53-205ENST00000509769 LINC00208Q96KT6 92 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 IGKV1D-8A0A087WSZ0 117 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 EDN2P20800 178 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 Q6ZSR3 168 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 RHPN1-AS1Q9BWJ2 59 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 KRTAP17-1Q9BYP8 105 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 FAM186AA6NE01 2351 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 KMT2BQ9UMN6 2715 aaPredicted RBP2.75□□□□□ -1.97
USP53-205ENST00000509769 SIPA1L1O43166 1804 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 SCN3AQ9NY46 2000 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 K7EQD1 137 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 PSCAO43653 123 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 C3orf56Q8N813 242 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 C16orf74Q96GX8 76 aa2.75□□□□□ -1.97
USP53-205ENST00000509769 H3BUX3 64 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 PSPNO60542 156 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 GYPEP15421 78 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 Q0VFX4 171 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 PRR15Q8IV56 129 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 LINC00308Q8TCZ7 52 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 BAZ2AQ9UIF9 1905 aaKnown RBP2.74□□□□□ -1.97
USP53-205ENST00000509769 SCN5AQ14524 2016 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 IGLV3-12A0A075B6K2 115 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 A0A087WWL8 130 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 BUB1B-PAK6H3BSN5 160 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 CITO14578 2027 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 C2orf91Q6ZV80 131 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 NUPR1O60356 82 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 CTSGP08311 255 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 P0C879 139 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 GRNP28799 593 aaKnown RBP2.74□□□□□ -1.97
USP53-205ENST00000509769 BSPH1Q075Z2 132 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 LINC01561Q8N1V8 128 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 ATRXP46100 2492 aa2.74□□□□□ -1.97
USP53-205ENST00000509769 IGHV1OR15-9A0A0B4J2B8 117 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 A8MZ25 164 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 H0Y9J4 135 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 TMEM178BH3BS89 294 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 IGKV3-20P01619 116 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 Q8TAT8 98 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 MBD6Q96DN6 1003 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 GPHA2Q96T91 129 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 ZNF71Q9NQZ8 489 aaPredicted RBP2.73□□□□□ -1.97
USP53-205ENST00000509769 KLK5Q9Y337 293 aaPredicted RBP2.73□□□□□ -1.97
USP53-205ENST00000509769 IGKV1-12A0A0C4DH73 117 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 A0A0J9YXV3 536 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 K7EMT4 169 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 IGKV1D-12P01611 117 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 MRGPRG-AS1Q2M3A8 158 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 CCL26Q9Y258 94 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 PRR19A6NJB7 356 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 UBE2DNLQ8IWF7 75 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 MIR7-3HGQ8N6C7 128 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 CAMK2N2Q96S95 79 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 SNURFQ9Y675 71 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 A0A0G2JRQ6 117 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 IGHV7-4-1A0A0J9YVY3 117 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 NCR3O14931 201 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 ZNF73O43830 326 aaPredicted RBP2.73□□□□□ -1.97
USP53-205ENST00000509769 C4orf26Q17RF5 130 aa2.73□□□□□ -1.97
USP53-205ENST00000509769 PTPRSQ13332 1948 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms