RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 SMIM15Q7Z3B0 74 aa11.09□□□□□ -0.63
PHF3-209ENST00000509330 LINC01006Q8NI28 216 aa11.09□□□□□ -0.63
PHF3-209ENST00000509330 C18orf15Q96N68 181 aa11.08□□□□□ -0.64
PHF3-209ENST00000509330 U3KQK5 164 aa11.08□□□□□ -0.64
PHF3-209ENST00000509330 RNASE3P12724 160 aaKnown RBP11.08□□□□□ -0.64
PHF3-209ENST00000509330 A0A096LNJ9 63 aa11.07□□□□□ -0.64
PHF3-209ENST00000509330 KLLNB2CW77 178 aa11.07□□□□□ -0.64
PHF3-209ENST00000509330 CD300EQ496F6 205 aaPredicted RBP11.07□□□□□ -0.64
PHF3-209ENST00000509330 TEX29Q8N6K0 151 aa11.07□□□□□ -0.64
PHF3-209ENST00000509330 KIR2DL5BA0A0G2JN68 375 aa11.07□□□□□ -0.64
PHF3-209ENST00000509330 KIR2DL5BA0A0G2JPC4 375 aa11.07□□□□□ -0.64
PHF3-209ENST00000509330 SYS1-DBNDD2H3BUS1 97 aa11.07□□□□□ -0.64
PHF3-209ENST00000509330 TCF21O43680 179 aa11.07□□□□□ -0.64
PHF3-209ENST00000509330 KIR2DL5AQ8N109 375 aa11.07□□□□□ -0.64
PHF3-209ENST00000509330 MUC4Q99102 2169 aa11.07□□□□□ -0.64
PHF3-209ENST00000509330 SNAI2O43623 268 aa11.07□□□□□ -0.64
PHF3-209ENST00000509330 PEMTQ9UBM1 199 aa11.07□□□□□ -0.64
PHF3-209ENST00000509330 C7orf71A4D174 169 aa11.06□□□□□ -0.64
PHF3-209ENST00000509330 MAP1LC3AQ9H492 121 aa11.06□□□□□ -0.64
PHF3-209ENST00000509330 MDFICQ9P1T7 246 aa11.06□□□□□ -0.64
PHF3-209ENST00000509330 HIVEP1P15822 2718 aa11.06□□□□□ -0.64
PHF3-209ENST00000509330 C2CD3Q4AC94 2353 aa11.06□□□□□ -0.64
PHF3-209ENST00000509330 hDV102S1A0JD36 115 aa11.06□□□□□ -0.64
PHF3-209ENST00000509330 OR4C46A6NHA9 309 aa11.06□□□□□ -0.64
PHF3-209ENST00000509330 LY6G6DO95868 133 aa11.06□□□□□ -0.64
PHF3-209ENST00000509330 A0A087WWL8 130 aa11.05□□□□□ -0.64
PHF3-209ENST00000509330 TCAPO15273 167 aa11.05□□□□□ -0.64
PHF3-209ENST00000509330 NSUN5P1Q3KNT7 163 aa11.05□□□□□ -0.64
PHF3-209ENST00000509330 MAP1LC3CQ9BXW4 147 aa11.05□□□□□ -0.64
PHF3-209ENST00000509330 CCL24O00175 119 aa11.05□□□□□ -0.64
PHF3-209ENST00000509330 CDKN1BP46527 198 aa11.05□□□□□ -0.64
PHF3-209ENST00000509330 RPL39LQ96EH5 51 aaKnown RBP11.05□□□□□ -0.64
PHF3-209ENST00000509330 FAM74A4Q5TZK3 123 aa11.04□□□□□ -0.64
PHF3-209ENST00000509330 OR2K2Q8NGT1 345 aa11.04□□□□□ -0.64
PHF3-209ENST00000509330 ZNF418Q8TF45 676 aaPredicted RBP11.04□□□□□ -0.64
PHF3-209ENST00000509330 NDUFAF3Q9BU61 184 aa11.04□□□□□ -0.64
PHF3-209ENST00000509330 SAMD13Q5VXD3 122 aa11.04□□□□□ -0.64
PHF3-209ENST00000509330 Q8N1Y9 231 aa11.04□□□□□ -0.64
PHF3-209ENST00000509330 NSD1Q96L73 2696 aaPredicted RBP11.03□□□□□ -0.64
PHF3-209ENST00000509330 EREGO14944 169 aa11.03□□□□□ -0.64
PHF3-209ENST00000509330 CACNG7P62955 275 aa11.03□□□□□ -0.64
PHF3-209ENST00000509330 BATFQ16520 125 aa11.03□□□□□ -0.64
PHF3-209ENST00000509330 ZNF747Q9BV97 191 aa11.03□□□□□ -0.64
PHF3-209ENST00000509330 HSPB8Q9UJY1 196 aa11.03□□□□□ -0.64
PHF3-209ENST00000509330 INAFM1C9JVW0 142 aa11.03□□□□□ -0.64
PHF3-209ENST00000509330 RNASE1P07998 156 aaKnown RBP11.03□□□□□ -0.64
PHF3-209ENST00000509330 RBMY1A1P0DJD3 496 aaKnown RBP11.03□□□□□ -0.64
PHF3-209ENST00000509330 RBMY1CP0DJD4 496 aa11.03□□□□□ -0.64
PHF3-209ENST00000509330 LEPP41159 167 aa11.03□□□□□ -0.64
PHF3-209ENST00000509330 RBMY1FQ15415 496 aaKnown RBP11.03□□□□□ -0.64
PHF3-209ENST00000509330 DEFB114Q30KQ6 69 aa11.03□□□□□ -0.64
PHF3-209ENST00000509330 NEGR1Q7Z3B1 354 aa11.03□□□□□ -0.64
PHF3-209ENST00000509330 FOXI2Q6ZQN5 318 aa11.02□□□□□ -0.64
PHF3-209ENST00000509330 RBMY1BA6NDE4 496 aaKnown RBP11.02□□□□□ -0.65
PHF3-209ENST00000509330 RBMY1EA6NEQ0 496 aaKnown RBP11.02□□□□□ -0.65
PHF3-209ENST00000509330 RBMY1DP0C7P1 496 aaKnown RBP11.02□□□□□ -0.65
PHF3-209ENST00000509330 IGLL1P15814 213 aa11.02□□□□□ -0.65
PHF3-209ENST00000509330 HBDP02042 147 aa11.01□□□□□ -0.65
PHF3-209ENST00000509330 PPBPP02775 128 aa11.01□□□□□ -0.65
PHF3-209ENST00000509330 NRACQ8N912 160 aa11.01□□□□□ -0.65
PHF3-209ENST00000509330 MAP6D1Q9H9H5 199 aa11.01□□□□□ -0.65
PHF3-209ENST00000509330 F5H697 171 aa11.01□□□□□ -0.65
PHF3-209ENST00000509330 HILS1P60008 231 aa11.01□□□□□ -0.65
PHF3-209ENST00000509330 AMTNQ6UX39 209 aa11.01□□□□□ -0.65
PHF3-209ENST00000509330 C20orf144Q9BQM9 153 aa11.01□□□□□ -0.65
PHF3-209ENST00000509330 IGHV4-4A0A075B6R2 117 aa11□□□□□ -0.65
PHF3-209ENST00000509330 CBY3A6NI87 242 aa11□□□□□ -0.65
PHF3-209ENST00000509330 TMEM158Q8WZ71 300 aa11□□□□□ -0.65
PHF3-209ENST00000509330 DPH3P1Q9H4G8 78 aa11□□□□□ -0.65
PHF3-209ENST00000509330 AP1S3Q96PC3 154 aa11□□□□□ -0.65
PHF3-209ENST00000509330 IGHV1OR15-1A0A075B7D0 117 aa10.99□□□□□ -0.65
PHF3-209ENST00000509330 TRAV9-2A0A087WT02 112 aa10.99□□□□□ -0.65
PHF3-209ENST00000509330 C20orf202A1L168 122 aa10.99□□□□□ -0.65
PHF3-209ENST00000509330 SAP30O75446 220 aa10.99□□□□□ -0.65
PHF3-209ENST00000509330 DUSP14O95147 198 aaKnown RBP10.99□□□□□ -0.65
PHF3-209ENST00000509330 CTAG1AP78358 180 aa10.99□□□□□ -0.65
PHF3-209ENST00000509330 MIEN1Q9BRT3 115 aa10.99□□□□□ -0.65
PHF3-209ENST00000509330 SCRT2Q9NQ03 307 aa10.99□□□□□ -0.65
PHF3-209ENST00000509330 IGHV3OR16-12A0A075B7B8 117 aa10.99□□□□□ -0.65
PHF3-209ENST00000509330 TRBV7-9A0A0J9YWB2 115 aa10.99□□□□□ -0.65
PHF3-209ENST00000509330 H3BMM0 161 aa10.99□□□□□ -0.65
PHF3-209ENST00000509330 SMIM17P0DL12 118 aa10.99□□□□□ -0.65
PHF3-209ENST00000509330 Q6ZN92 141 aa10.99□□□□□ -0.65
PHF3-209ENST00000509330 RASL10AQ92737 203 aa10.99□□□□□ -0.65
PHF3-209ENST00000509330 TSSC4Q9Y5U2 329 aaPredicted RBP10.99□□□□□ -0.65
PHF3-209ENST00000509330 VWFP04275 2813 aa10.99□□□□□ -0.65
PHF3-209ENST00000509330 TSPOP30536 169 aa10.98□□□□□ -0.65
PHF3-209ENST00000509330 IGHV3-73A0A0B4J1V6 119 aa10.98□□□□□ -0.65
PHF3-209ENST00000509330 IGHV3-16A0A0C4DH30 117 aa10.98□□□□□ -0.65
PHF3-209ENST00000509330 IGLC3P0DOY3 106 aa10.98□□□□□ -0.65
PHF3-209ENST00000509330 SNHG12Q9BXW3 62 aa10.98□□□□□ -0.65
PHF3-209ENST00000509330 WFDC10AQ9H1F0 79 aa10.98□□□□□ -0.65
PHF3-209ENST00000509330 TENM1Q9UKZ4 2725 aa10.98□□□□□ -0.65
PHF3-209ENST00000509330 CRXO43186 299 aaPredicted RBP10.98□□□□□ -0.65
PHF3-209ENST00000509330 HLA-DRB4P13762 266 aa10.98□□□□□ -0.65
PHF3-209ENST00000509330 HLA-DRB4X5D2U9 266 aa10.98□□□□□ -0.65
PHF3-209ENST00000509330 IFI27L1Q96BM0 104 aa10.97□□□□□ -0.65
PHF3-209ENST00000509330 NXT2Q9NPJ8 142 aaKnown RBP10.97□□□□□ -0.65
PHF3-209ENST00000509330 XCL2Q9UBD3 114 aa10.97□□□□□ -0.65
PHF3-209ENST00000509330 A0A1B0GV90 55 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms