RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 PGPEP1LA6NFU8 196 aa7□□□□□ -1.29
NEDD9-212ENST00000508800 TMEM262E9PQX1 116 aa7□□□□□ -1.29
NEDD9-212ENST00000508800 RHODO00212 210 aa7□□□□□ -1.29
NEDD9-212ENST00000508800 CHTF8P0CG12 524 aa7□□□□□ -1.29
NEDD9-212ENST00000508800 ZNF664Q8N3J9 261 aa7□□□□□ -1.29
NEDD9-212ENST00000508800 OR2T35Q8NGX2 323 aa7□□□□□ -1.29
NEDD9-212ENST00000508800 DEDD2Q8WXF8 326 aa7□□□□□ -1.29
NEDD9-212ENST00000508800 FXYD5Q96DB9 178 aa7□□□□□ -1.29
NEDD9-212ENST00000508800 SAMD10Q9BYL1 202 aa7□□□□□ -1.29
NEDD9-212ENST00000508800 TREM1Q9NP99 234 aa7□□□□□ -1.29
NEDD9-212ENST00000508800 PSORS1C2Q9UIG4 136 aa7□□□□□ -1.29
NEDD9-212ENST00000508800 TRAV26-2A0A0B4J265 109 aa6.99□□□□□ -1.29
NEDD9-212ENST00000508800 hDV102S1A0JD36 115 aa6.99□□□□□ -1.29
NEDD9-212ENST00000508800 H7C1H1 209 aa6.99□□□□□ -1.29
NEDD9-212ENST00000508800 L7N2F9 121 aa6.99□□□□□ -1.29
NEDD9-212ENST00000508800 TCRBP04435 133 aa6.99□□□□□ -1.29
NEDD9-212ENST00000508800 RANP62826 216 aaKnown RBP6.99□□□□□ -1.29
NEDD9-212ENST00000508800 VAMP2P63027 116 aa6.99□□□□□ -1.29
NEDD9-212ENST00000508800 SRSF9Q13242 221 aaKnown RBP eCLIP6.99□□□□□ -1.29
NEDD9-212ENST00000508800 IAH1Q2TAA2 248 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-212ENST00000508800 LYRM2Q9NU23 88 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-212ENST00000508800 FSIP2Q5CZC0 6907 aa6.99□□□□□ -1.29
NEDD9-212ENST00000508800 UBE2L5PA0A1B0GUS4 154 aa6.98□□□□□ -1.29
NEDD9-212ENST00000508800 C9orf170A2RU37 121 aa6.98□□□□□ -1.29
NEDD9-212ENST00000508800 CTDSP2O14595 271 aa6.98□□□□□ -1.29
NEDD9-212ENST00000508800 S100A11P31949 105 aa6.98□□□□□ -1.29
NEDD9-212ENST00000508800 SPANXN2Q5MJ10 180 aa6.98□□□□□ -1.29
NEDD9-212ENST00000508800 ARL6IP6Q8N6S5 226 aa6.98□□□□□ -1.29
NEDD9-212ENST00000508800 C14orf178Q8N769 122 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-212ENST00000508800 NDFIP1Q9BT67 221 aa6.98□□□□□ -1.29
NEDD9-212ENST00000508800 PRR34Q9NV39 138 aa6.98□□□□□ -1.29
NEDD9-212ENST00000508800 Q9UF83 564 aa6.98□□□□□ -1.29
NEDD9-212ENST00000508800 TRBV6-8A0A0A6YYG3 113 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 TRBV10-1A0A0K0K1A3 114 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 F6UZH7 168 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 OR7C2O60412 319 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 CST7O76096 145 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 FGF7P21781 194 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 S100A10P60903 97 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 HBG1P69891 147 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 HBG2P69892 147 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 RPL36AP83881 106 aaKnown RBP6.97□□□□□ -1.29
NEDD9-212ENST00000508800 MPV17L2Q567V2 206 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 FAM74A1Q5RGS3 127 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 UFSP1Q6NVU6 142 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 Q6ZRP5 223 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 MIR17HGQ75NE6 70 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 CMTM2Q8TAZ6 248 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 RPL36ALQ969Q0 106 aaKnown RBP6.97□□□□□ -1.29
NEDD9-212ENST00000508800 NMES1Q9C002 83 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 SLIRPQ9GZT3 109 aaKnown RBP6.97□□□□□ -1.29
NEDD9-212ENST00000508800 CRCT1Q9UGL9 99 aa6.97□□□□□ -1.29
NEDD9-212ENST00000508800 MBPP02686 304 aaPredicted RBP6.96□□□□□ -1.3
NEDD9-212ENST00000508800 RNASE3P12724 160 aaKnown RBP6.96□□□□□ -1.3
NEDD9-212ENST00000508800 BCAP31P51572 246 aa6.96□□□□□ -1.3
NEDD9-212ENST00000508800 CTF1Q16619 201 aa6.96□□□□□ -1.3
NEDD9-212ENST00000508800 LGALSLQ3ZCW2 172 aaPredicted RBP6.96□□□□□ -1.3
NEDD9-212ENST00000508800 GCSAMLQ5JQS6 135 aa6.96□□□□□ -1.3
NEDD9-212ENST00000508800 KRTAP26-1Q6PEX3 210 aa6.96□□□□□ -1.3
NEDD9-212ENST00000508800 TMEM75Q8N9X5 138 aa6.96□□□□□ -1.3
NEDD9-212ENST00000508800 NPCDR1Q9BY65 106 aa6.96□□□□□ -1.3
NEDD9-212ENST00000508800 KCNIP2Q9NS61 270 aa6.96□□□□□ -1.3
NEDD9-212ENST00000508800 GSKIPQ9P0R6 139 aa6.96□□□□□ -1.3
NEDD9-212ENST00000508800 NDUFS6O75380 124 aaKnown RBP6.95□□□□□ -1.3
NEDD9-212ENST00000508800 SULT1A1P50225 295 aa6.95□□□□□ -1.3
NEDD9-212ENST00000508800 UBE2L3P68036 154 aaKnown RBP6.95□□□□□ -1.3
NEDD9-212ENST00000508800 ATP6V1FQ16864 119 aa6.95□□□□□ -1.3
NEDD9-212ENST00000508800 MAJINQ3KP22 176 aa6.95□□□□□ -1.3
NEDD9-212ENST00000508800 STX12Q86Y82 276 aa6.95□□□□□ -1.3
NEDD9-212ENST00000508800 TOMM5Q8N4H5 51 aa6.95□□□□□ -1.3
NEDD9-212ENST00000508800 STPG4Q8N801 248 aa6.95□□□□□ -1.3
NEDD9-212ENST00000508800 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-212ENST00000508800 MRPS26Q9BYN8 205 aaKnown RBP6.95□□□□□ -1.3
NEDD9-212ENST00000508800 OTORQ9NRC9 128 aa6.95□□□□□ -1.3
NEDD9-212ENST00000508800 OR5AC2Q9NZP5 309 aa6.95□□□□□ -1.3
NEDD9-212ENST00000508800 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
NEDD9-212ENST00000508800 IGLV10-54A0A075B6I4 117 aa6.94□□□□□ -1.3
NEDD9-212ENST00000508800 TRBV7-3A0A075B6L6 115 aa6.94□□□□□ -1.3
NEDD9-212ENST00000508800 IFNA7P01567 189 aa6.94□□□□□ -1.3
NEDD9-212ENST00000508800 GZMBP10144 247 aa6.94□□□□□ -1.3
NEDD9-212ENST00000508800 PVALBP20472 110 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-212ENST00000508800 UBE2D3P61077 147 aa6.94□□□□□ -1.3
NEDD9-212ENST00000508800 UBE2D2P62837 147 aa6.94□□□□□ -1.3
NEDD9-212ENST00000508800 CACNG7P62955 275 aa6.94□□□□□ -1.3
NEDD9-212ENST00000508800 GOLT1AQ6ZVE7 132 aa6.94□□□□□ -1.3
NEDD9-212ENST00000508800 TVP23CQ96ET8 276 aa6.94□□□□□ -1.3
NEDD9-212ENST00000508800 HYLS1Q96M11 299 aa6.94□□□□□ -1.3
NEDD9-212ENST00000508800 C11orf21Q9P2W6 132 aa6.94□□□□□ -1.3
NEDD9-212ENST00000508800 PKIGQ9Y2B9 76 aa6.94□□□□□ -1.3
NEDD9-212ENST00000508800 TRAV8-4A0A0B4J246 113 aa6.93□□□□□ -1.3
NEDD9-212ENST00000508800 SERTM2A0A1B0GWG4 89 aa6.93□□□□□ -1.3
NEDD9-212ENST00000508800 P01737 135 aa6.93□□□□□ -1.3
NEDD9-212ENST00000508800 S100A4P26447 101 aaKnown RBP6.93□□□□□ -1.3
NEDD9-212ENST00000508800 COX6A2Q02221 97 aa6.93□□□□□ -1.3
NEDD9-212ENST00000508800 PRR4Q16378 134 aa6.93□□□□□ -1.3
NEDD9-212ENST00000508800 ZFP69Q49AA0 526 aa6.93□□□□□ -1.3
NEDD9-212ENST00000508800 LYPD6BQ8NI32 183 aa6.93□□□□□ -1.3
NEDD9-212ENST00000508800 CHCHD5Q9BSY4 110 aa6.93□□□□□ -1.3
NEDD9-212ENST00000508800 A0A087WWL8 130 aa6.92□□□□□ -1.3
NEDD9-212ENST00000508800 SLPIP03973 132 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms