RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 APLNQ9ULZ1 77 aa6.68□□□□□ -1.34
CLCN3-205ENST00000506924 TRGV1A0A0A0MS02 117 aa6.67□□□□□ -1.34
CLCN3-205ENST00000506924 TRAV21A0A0B4J279 112 aa6.67□□□□□ -1.34
CLCN3-205ENST00000506924 GCGP01275 180 aa6.67□□□□□ -1.34
CLCN3-205ENST00000506924 RAB5CP51148 216 aa6.67□□□□□ -1.34
CLCN3-205ENST00000506924 FAM159AQ6UWV7 190 aa6.67□□□□□ -1.34
CLCN3-205ENST00000506924 Q86TA4 180 aa6.67□□□□□ -1.34
CLCN3-205ENST00000506924 ZNF680Q8NEM1 530 aa6.67□□□□□ -1.34
CLCN3-205ENST00000506924 LINC00467Q9BRT7 94 aa6.67□□□□□ -1.34
CLCN3-205ENST00000506924 NKX6-2Q9C056 277 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-205ENST00000506924 MRPL16Q9NX20 251 aaKnown RBP6.67□□□□□ -1.34
CLCN3-205ENST00000506924 ARL2-SNX15V9GYD0 113 aa6.67□□□□□ -1.34
CLCN3-205ENST00000506924 AKR1C3P42330 323 aa6.66□□□□□ -1.34
CLCN3-205ENST00000506924 PPT1P50897 306 aa6.66□□□□□ -1.34
CLCN3-205ENST00000506924 UBE2G1P62253 170 aa6.66□□□□□ -1.34
CLCN3-205ENST00000506924 SMUG1Q53HV7 270 aa6.66□□□□□ -1.34
CLCN3-205ENST00000506924 NHLRC2Q8NBF2 726 aa6.66□□□□□ -1.34
CLCN3-205ENST00000506924 HIST1H2BAQ96A08 127 aa6.66□□□□□ -1.34
CLCN3-205ENST00000506924 DYNC2H1Q8NCM8 4307 aaKnown RBP6.66□□□□□ -1.34
CLCN3-205ENST00000506924 RYR3Q15413 4870 aa6.66□□□□□ -1.34
CLCN3-205ENST00000506924 TRGV2A0A075B6R0 118 aa6.65□□□□□ -1.34
CLCN3-205ENST00000506924 IGHV3-53P01767 116 aa6.65□□□□□ -1.34
CLCN3-205ENST00000506924 TYMSP04818 313 aa6.65□□□□□ -1.34
CLCN3-205ENST00000506924 ATP5G1P05496 136 aa6.65□□□□□ -1.34
CLCN3-205ENST00000506924 TCL1AP56279 114 aa6.65□□□□□ -1.34
CLCN3-205ENST00000506924 ZNF415Q09FC8 603 aa6.65□□□□□ -1.34
CLCN3-205ENST00000506924 DAZ2Q13117 558 aaKnown RBP6.65□□□□□ -1.34
CLCN3-205ENST00000506924 OR5I1Q13606 314 aa6.65□□□□□ -1.34
CLCN3-205ENST00000506924 SAPCD1Q5SSQ6 148 aa6.65□□□□□ -1.34
CLCN3-205ENST00000506924 KRTAP5-3Q6L8H2 238 aa6.65□□□□□ -1.34
CLCN3-205ENST00000506924 ZC2HC1AQ96GY0 325 aa6.65□□□□□ -1.34
CLCN3-205ENST00000506924 FMC1Q96HJ9 113 aa6.65□□□□□ -1.34
CLCN3-205ENST00000506924 NDUFAF3Q9BU61 184 aa6.65□□□□□ -1.34
CLCN3-205ENST00000506924 CTDSP1Q9GZU7 261 aa6.65□□□□□ -1.34
CLCN3-205ENST00000506924 SDF2L1Q9HCN8 221 aa6.65□□□□□ -1.34
CLCN3-205ENST00000506924 HYDINQ4G0P3 5121 aa6.65□□□□□ -1.35
CLCN3-205ENST00000506924 TRAV1-1A0A0B4J248 108 aa6.64□□□□□ -1.35
CLCN3-205ENST00000506924 IGHV3-16A0A0C4DH30 117 aa6.64□□□□□ -1.35
CLCN3-205ENST00000506924 A0A0J9YY99 117 aa6.64□□□□□ -1.35
CLCN3-205ENST00000506924 TEX46H3BTG2 121 aa6.64□□□□□ -1.35
CLCN3-205ENST00000506924 SPINK4O60575 86 aa6.64□□□□□ -1.35
CLCN3-205ENST00000506924 PFN1P07737 140 aaKnown RBP6.64□□□□□ -1.35
CLCN3-205ENST00000506924 CRIP1P50238 77 aa6.64□□□□□ -1.35
CLCN3-205ENST00000506924 IBA57Q5T440 356 aaKnown RBP6.64□□□□□ -1.35
CLCN3-205ENST00000506924 LINC00612Q8N6U2 182 aa6.64□□□□□ -1.35
CLCN3-205ENST00000506924 MANBALQ9NQG1 85 aa6.64□□□□□ -1.35
CLCN3-205ENST00000506924 IGLV5-39A0A0G2JS06 123 aa6.63□□□□□ -1.35
CLCN3-205ENST00000506924 FBLL1A6NHQ2 334 aaKnown RBP6.63□□□□□ -1.35
CLCN3-205ENST00000506924 M0R036 132 aa6.63□□□□□ -1.35
CLCN3-205ENST00000506924 RYR2Q92736 4967 aa6.63□□□□□ -1.35
CLCN3-205ENST00000506924 DERL1Q9BUN8 251 aa6.63□□□□□ -1.35
CLCN3-205ENST00000506924 TRAV26-1A0A087WT03 109 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 TMSB15BA0A087X1C1 80 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 IGKV3D-20A0A0C4DH25 116 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 GRIFINA4D1Z8 144 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 FABP5P3A8MUU1 101 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 C9JCJ5 164 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 SH2D1AO60880 128 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 LTAP01374 205 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 ORM1P02763 201 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 SFTA3P0C7M3 94 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 TCTAP57738 103 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 TDRG1Q3Y452 100 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 LGALS9CQ6DKI2 356 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 BAGE2Q86Y30 109 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 PCNPQ8WW12 178 aaKnown RBP6.62□□□□□ -1.35
CLCN3-205ENST00000506924 KCNS1Q96KK3 526 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 TCEAL7Q9BRU2 100 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 ZFP30Q9Y2G7 519 aa6.62□□□□□ -1.35
CLCN3-205ENST00000506924 SACSQ9NZJ4 4579 aa6.61□□□□□ -1.35
CLCN3-205ENST00000506924 ALMS1Q8TCU4 4167 aa6.61□□□□□ -1.35
CLCN3-205ENST00000506924 TRBV6-1A0A0K0K1D8 114 aa6.61□□□□□ -1.35
CLCN3-205ENST00000506924 RAB19A4D1S5 217 aa6.61□□□□□ -1.35
CLCN3-205ENST00000506924 GAGE10A6NGK3 116 aa6.61□□□□□ -1.35
CLCN3-205ENST00000506924 B4DEV8 164 aa6.61□□□□□ -1.35
CLCN3-205ENST00000506924 IFNA1P01562 189 aa6.61□□□□□ -1.35
CLCN3-205ENST00000506924 BCL2P10415 239 aa6.61□□□□□ -1.35
CLCN3-205ENST00000506924 RPL35P42766 123 aaKnown RBP6.61□□□□□ -1.35
CLCN3-205ENST00000506924 MEF2BQ02080 365 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-205ENST00000506924 FAM162BQ5T6X4 162 aa6.61□□□□□ -1.35
CLCN3-205ENST00000506924 PRR27Q6MZM9 219 aa6.61□□□□□ -1.35
CLCN3-205ENST00000506924 NRACQ8N912 160 aa6.61□□□□□ -1.35
CLCN3-205ENST00000506924 SPXQ9BT56 116 aa6.61□□□□□ -1.35
CLCN3-205ENST00000506924 M0R2P5 195 aa6.6□□□□□ -1.35
CLCN3-205ENST00000506924 S100A9P06702 114 aaKnown RBP6.6□□□□□ -1.35
CLCN3-205ENST00000506924 S100A4P26447 101 aaKnown RBP6.6□□□□□ -1.35
CLCN3-205ENST00000506924 RPL19P84098 196 aaKnown RBP6.6□□□□□ -1.35
CLCN3-205ENST00000506924 ZNF674Q2M3X9 581 aa6.6□□□□□ -1.35
CLCN3-205ENST00000506924 LGALS9BQ3B8N2 356 aa6.6□□□□□ -1.35
CLCN3-205ENST00000506924 UBE2DNLQ8IWF7 75 aa6.6□□□□□ -1.35
CLCN3-205ENST00000506924 C11orf52Q96A22 123 aa6.6□□□□□ -1.35
CLCN3-205ENST00000506924 ZNF479Q96JC4 524 aa6.6□□□□□ -1.35
CLCN3-205ENST00000506924 FAM210BQ96KR6 192 aa6.6□□□□□ -1.35
CLCN3-205ENST00000506924 MED9Q9NWA0 146 aa6.6□□□□□ -1.35
CLCN3-205ENST00000506924 VAX2Q9UIW0 290 aa6.6□□□□□ -1.35
CLCN3-205ENST00000506924 IGHV3-73A0A0B4J1V6 119 aa6.59□□□□□ -1.35
CLCN3-205ENST00000506924 TRGV4A0A0C4DH28 118 aa6.59□□□□□ -1.35
CLCN3-205ENST00000506924 PGPEP1LA6NFU8 196 aa6.59□□□□□ -1.35
CLCN3-205ENST00000506924 KRBOX1C9JBD0 128 aa6.59□□□□□ -1.35
CLCN3-205ENST00000506924 H3BVH4 76 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms