RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 K7ERU9 68 aa5.75□□□□□ -1.49
PPARGC1A-204ENST00000506055 FABP2P12104 132 aa5.75□□□□□ -1.49
PPARGC1A-204ENST00000506055 RNASE3P12724 160 aaKnown RBP5.75□□□□□ -1.49
PPARGC1A-204ENST00000506055 TMEM95Q3KNT9 176 aa5.75□□□□□ -1.49
PPARGC1A-204ENST00000506055 CEND1Q8N111 149 aa5.75□□□□□ -1.49
PPARGC1A-204ENST00000506055 DAZ1Q9NQZ3 744 aaKnown RBP5.75□□□□□ -1.49
PPARGC1A-204ENST00000506055 MSMBP08118 114 aa5.74□□□□□ -1.49
PPARGC1A-204ENST00000506055 NEGR1Q7Z3B1 354 aa5.74□□□□□ -1.49
PPARGC1A-204ENST00000506055 TOMM6Q96B49 74 aa5.74□□□□□ -1.49
PPARGC1A-204ENST00000506055 C20orf78Q9BR46 151 aa5.74□□□□□ -1.49
PPARGC1A-204ENST00000506055 CHTOPQ9Y3Y2 248 aaKnown RBP5.74□□□□□ -1.49
PPARGC1A-204ENST00000506055 SPG11Q96JI7 2443 aa5.74□□□□□ -1.49
PPARGC1A-204ENST00000506055 FLNCQ14315 2725 aa5.74□□□□□ -1.49
PPARGC1A-204ENST00000506055 CFAP46Q8IYW2 2715 aa5.74□□□□□ -1.49
PPARGC1A-204ENST00000506055 F8VRH5 84 aa5.74□□□□□ -1.49
PPARGC1A-204ENST00000506055 AVPP01185 164 aa5.74□□□□□ -1.49
PPARGC1A-204ENST00000506055 C2orf66Q6UXQ4 117 aa5.74□□□□□ -1.49
PPARGC1A-204ENST00000506055 FAM19A4Q96LR4 140 aa5.74□□□□□ -1.49
PPARGC1A-204ENST00000506055 HIST1H4GQ99525 98 aa5.74□□□□□ -1.49
PPARGC1A-204ENST00000506055 CSTL1Q9H114 145 aa5.74□□□□□ -1.49
PPARGC1A-204ENST00000506055 H3BUA1 57 aa5.73□□□□□ -1.49
PPARGC1A-204ENST00000506055 IGLV1-40P01703 118 aa5.73□□□□□ -1.49
PPARGC1A-204ENST00000506055 FAM159AQ6UWV7 190 aa5.73□□□□□ -1.49
PPARGC1A-204ENST00000506055 JPT2Q9H910 190 aa5.73□□□□□ -1.49
PPARGC1A-204ENST00000506055 A0A087WWL8 130 aa5.73□□□□□ -1.49
PPARGC1A-204ENST00000506055 TRAV12-3A0A0B4J271 114 aa5.73□□□□□ -1.49
PPARGC1A-204ENST00000506055 IGKV3-20P01619 116 aa5.73□□□□□ -1.49
PPARGC1A-204ENST00000506055 NEXN-AS1Q8NBZ9 246 aa5.73□□□□□ -1.49
PPARGC1A-204ENST00000506055 TM2D2Q9BX73 214 aa5.73□□□□□ -1.49
PPARGC1A-204ENST00000506055 TRAV12-1A0A0B4J245 112 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 RNF223E7ERA6 249 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 F5H697 171 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 NDUFS8O00217 210 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 HLA-DRB4P13762 266 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 C10orf99Q6UWK7 81 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 OR5A1Q8NGJ0 315 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 BAALCQ8WXS3 180 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 NRGNQ92686 78 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 HLA-DRB4X5D2U9 266 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 PRSS29PA6NIE9 313 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 OR11H12B2RN74 326 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 CD7P09564 240 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 ID1P41134 155 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 OR11H1Q8NG94 326 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 OR11H2Q8NH07 326 aa5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 PHLDA1Q8WV24 401 aaPredicted RBP5.72□□□□□ -1.49
PPARGC1A-204ENST00000506055 BRI3O95415 125 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 ZNF688P0C7X2 276 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 SLC25A16P16260 332 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 FAM74A4Q5TZK3 123 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 APRG1Q8IVJ8 170 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 DCANP1Q8TF63 244 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.71□□□□□ -1.59e-7■■■■□ 23.6
PPARGC1A-204ENST00000506055 TRAV12-2A0A075B6T6 113 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 MYMXA0A1B0GTQ4 84 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 KLLNB2CW77 178 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 DUSP14O95147 198 aaKnown RBP5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 IGHV4-59P01825 116 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 MED14OSP0DP75 135 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 EMP1P54849 157 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 RIPPLY3P57055 190 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 SCGB2A2Q13296 93 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 CYSLTR1Q9Y271 337 aa5.71□□□□□ -1.5
PPARGC1A-204ENST00000506055 MUC4Q99102 2169 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 PKD1L2Q7Z442 2459 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 B4DSR2 109 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 PPP1R17O96001 155 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 RPL24P83731 157 aaKnown RBP5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 CFHR3Q02985 330 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 C12orf74Q32Q52 190 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 MAPK1IP1LQ8NDC0 245 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 TP53TG1Q9Y2A0 90 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 TRBV7-9A0A0J9YWB2 115 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 IGLL5B9A064 214 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 G3V4G9 280 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 LINC00315P59091 139 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 RPL39P62891 51 aaKnown RBP5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 DEFB112Q30KQ8 113 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 SUMO4Q6EEV6 95 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 PRADC1Q9BSG0 188 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 KIF25-AS1Q9Y6Z4 181 aa5.7□□□□□ -1.5
PPARGC1A-204ENST00000506055 ZANQ9Y493 2812 aa5.69□□□□□ -1.5
PPARGC1A-204ENST00000506055 K7EMT4 169 aa5.69□□□□□ -1.5
PPARGC1A-204ENST00000506055 PSMB8P28062 276 aa5.69□□□□□ -1.5
PPARGC1A-204ENST00000506055 TAL2Q16559 108 aa5.69□□□□□ -1.5
PPARGC1A-204ENST00000506055 CD300EQ496F6 205 aaPredicted RBP5.69□□□□□ -1.5
PPARGC1A-204ENST00000506055 KLHL30-AS1Q8NEE0 82 aa5.69□□□□□ -1.5
PPARGC1A-204ENST00000506055 MDFICQ9P1T7 246 aa5.69□□□□□ -1.5
PPARGC1A-204ENST00000506055 ZNF815PA8K554 130 aa5.69□□□□□ -1.5
PPARGC1A-204ENST00000506055 CRYGDP07320 174 aa5.69□□□□□ -1.5
PPARGC1A-204ENST00000506055 SCGB1D4Q6XE38 83 aa5.69□□□□□ -1.5
PPARGC1A-204ENST00000506055 ZFP2Q6ZN57 461 aa5.69□□□□□ -1.5
PPARGC1A-204ENST00000506055 ZNF479Q96JC4 524 aa5.69□□□□□ -1.5
PPARGC1A-204ENST00000506055 DUX5Q96PT3 197 aa5.69□□□□□ -1.5
PPARGC1A-204ENST00000506055 SDHAF1A6NFY7 115 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 E9PLD3 99 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 H3BMG7 143 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 NXPH4O95158 308 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 TSHBP01222 138 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 LGALS1P09382 135 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms