RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 KNCNA6PVL3 124 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 GNRH2O43555 120 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 RAB4AP20338 218 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 PMCHP20382 165 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 JOSD1Q15040 202 aaPredicted RBP5.96□□□□□ -1.46
COL4A5-208ENST00000505728 IQCJQ1A5X6 159 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 MRPL51Q4U2R6 128 aaKnown RBP5.96□□□□□ -1.46
COL4A5-208ENST00000505728 MUC21Q5SSG8 566 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 SPANXN1Q5VSR9 72 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 NIT1Q86X76 327 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 AMN1Q8IY45 258 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 ORMDL3Q8N138 153 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 OR10AG1Q8NH19 301 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 RNF185Q96GF1 192 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 SAMD10Q9BYL1 202 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 MSRB1Q9NZV6 116 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 LAMTOR2Q9Y2Q5 125 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 MUC4Q99102 2169 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 NOTCH3Q9UM47 2321 aa5.96□□□□□ -1.46
COL4A5-208ENST00000505728 IGHV1OR15-1A0A075B7D0 117 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 TRAV12-3A0A0B4J271 114 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 H3BVH4 76 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 M0R2Z0 102 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 SAP30O75446 220 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 HSBP1O75506 76 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 IGKV3-20P01619 116 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 IGLV1-51P01701 117 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 LINC00614P0C842 121 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 RNASE3P12724 160 aaKnown RBP5.95□□□□□ -1.46
COL4A5-208ENST00000505728 CKS2P33552 79 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 SSTP61278 116 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 SPINK13Q1W4C9 94 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 PYY3Q5JQD4 70 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 C3orf56Q8N813 242 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 PRELID3AQ96N28 172 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 RCHY1Q96PM5 261 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 FAM110AQ9BQ89 295 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 C20orf144Q9BQM9 153 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 PHLDA3Q9Y5J5 127 aa5.95□□□□□ -1.46
COL4A5-208ENST00000505728 TRGV11A0A075B6L2 103 aa5.94□□□□□ -1.46
COL4A5-208ENST00000505728 TRAV12-2A0A075B6T6 113 aa5.94□□□□□ -1.46
COL4A5-208ENST00000505728 OR11H12B2RN74 326 aa5.94□□□□□ -1.46
COL4A5-208ENST00000505728 D6R8Y8 96 aa5.94□□□□□ -1.46
COL4A5-208ENST00000505728 NXPH4O95158 308 aa5.94□□□□□ -1.46
COL4A5-208ENST00000505728 PF4P02776 101 aa5.94□□□□□ -1.46
COL4A5-208ENST00000505728 CD7P09564 240 aa5.94□□□□□ -1.46
COL4A5-208ENST00000505728 AMTP48728 403 aa5.94□□□□□ -1.46
COL4A5-208ENST00000505728 PRR31Q5SQ13 230 aa5.94□□□□□ -1.46
COL4A5-208ENST00000505728 RNASEKQ6P5S7 137 aaKnown RBP5.94□□□□□ -1.46
COL4A5-208ENST00000505728 IGHV3-16A0A0C4DH30 117 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 PRSS47A8MTI9 375 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 CRXO43186 299 aaPredicted RBP5.93□□□□□ -1.46
COL4A5-208ENST00000505728 EVI2AP22794 236 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 INSL3P51460 131 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 BEAN1Q3B7T3 259 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 ODF3L2Q3SX64 289 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 FA2HQ7L5A8 372 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 LINC00482Q8N8I6 264 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 PRSS3P2Q8NHM4 247 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 MRAP2Q96G30 205 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 URB1-AS1Q96HZ7 61 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 C9orf85Q96MD7 179 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 LINC00467Q9BRT7 94 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 DPH3P1Q9H4G8 78 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 NIT2Q9NQR4 276 aa5.93□□□□□ -1.46
COL4A5-208ENST00000505728 TIMM8BQ9Y5J9 83 aaPredicted RBP5.93□□□□□ -1.46
COL4A5-208ENST00000505728 RBMY1BA6NDE4 496 aaKnown RBP5.92□□□□□ -1.46
COL4A5-208ENST00000505728 RBMY1EA6NEQ0 496 aaKnown RBP5.92□□□□□ -1.46
COL4A5-208ENST00000505728 RBMY1DP0C7P1 496 aaKnown RBP5.92□□□□□ -1.46
COL4A5-208ENST00000505728 Q6ZWC4 215 aa5.92□□□□□ -1.46
COL4A5-208ENST00000505728 STHQ8IWL8 128 aa5.92□□□□□ -1.46
COL4A5-208ENST00000505728 DEFB125Q8N687 156 aa5.92□□□□□ -1.46
COL4A5-208ENST00000505728 SYT8Q8NBV8 401 aa5.92□□□□□ -1.46
COL4A5-208ENST00000505728 CITED1Q99966 193 aa5.92□□□□□ -1.46
COL4A5-208ENST00000505728 MAP1LC3AQ9H492 121 aa5.92□□□□□ -1.46
COL4A5-208ENST00000505728 GSN-AS1Q9NRJ2 163 aa5.92□□□□□ -1.46
COL4A5-208ENST00000505728 SMKR1H3BMG3 65 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 M0R381 172 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 TNFRSF6BO95407 300 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 PPP1R17O96001 155 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 NPYP01303 97 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 INSP01308 110 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 FXYD7P58549 80 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 NUTF2P61970 127 aaKnown RBP5.91□□□□□ -1.46
COL4A5-208ENST00000505728 ZNF124Q15973 351 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 C9orf66Q5T8R8 295 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 TRPT1Q86TN4 253 aaKnown RBP5.91□□□□□ -1.46
COL4A5-208ENST00000505728 Q8N1Y9 231 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 FAM19A2Q8N3H0 131 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 POM121L12Q8N7R1 296 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 PTH2Q96A98 100 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 AP1S3Q96PC3 154 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 ZNF747Q9BV97 191 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 NXT2Q9NPJ8 142 aaKnown RBP5.91□□□□□ -1.46
COL4A5-208ENST00000505728 AP5S1Q9NUS5 200 aa5.91□□□□□ -1.46
COL4A5-208ENST00000505728 LINC01546A6NGU7 62 aa5.9□□□□□ -1.46
COL4A5-208ENST00000505728 CBY3A6NI87 242 aa5.9□□□□□ -1.46
COL4A5-208ENST00000505728 SCGB1D1O95968 90 aa5.9□□□□□ -1.46
COL4A5-208ENST00000505728 SMIM17P0DL12 118 aa5.9□□□□□ -1.46
COL4A5-208ENST00000505728 IFI27P40305 119 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms