RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 LINC00574Q9H8X3 128 aa4.83□□□□□ -1.64
CDH9-202ENST00000505020 ICOSQ9Y6W8 199 aa4.83□□□□□ -1.64
CDH9-202ENST00000505020 PTPRDP23468 1912 aa4.82□□□□□ -1.64
CDH9-202ENST00000505020 DEFA4P12838 97 aa4.82□□□□□ -1.64
CDH9-202ENST00000505020 XAF1Q6GPH4 301 aa4.82□□□□□ -1.64
CDH9-202ENST00000505020 TMEM141Q96I45 108 aa4.82□□□□□ -1.64
CDH9-202ENST00000505020 DEFB126Q9BYW3 111 aa4.82□□□□□ -1.64
CDH9-202ENST00000505020 ADGRB2O60241 1585 aa4.82□□□□□ -1.64
CDH9-202ENST00000505020 PLXNA3P51805 1871 aa4.82□□□□□ -1.64
CDH9-202ENST00000505020 LRP4O75096 1905 aa4.82□□□□□ -1.64
CDH9-202ENST00000505020 IGHV3-15A0A0B4J1V0 119 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 TRAV3A0A0B4J244 114 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 A0A0B4J2C4 111 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 C11orf94C9JXX5 98 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 IGHV4-34P06331 123 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 P0C879 139 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 NOVP48745 357 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 ROMO1P60602 79 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 UBE2G1P62253 170 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 IL17AQ16552 155 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 DYNAPQ8N1N2 210 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 MIR7-3HGQ8N6C7 128 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 XRN1Q8IZH2 1706 aaKnown RBP4.81□□□□□ -1.64
CDH9-202ENST00000505020 TNS1Q9HBL0 1735 aaKnown RBP4.81□□□□□ -1.64
CDH9-202ENST00000505020 CPSF4O95639 269 aaKnown RBP4.81□□□□□ -1.64
CDH9-202ENST00000505020 SNRPFP62306 86 aaKnown RBP4.81□□□□□ -1.64
CDH9-202ENST00000505020 ESRGQ1W209 222 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 C1orf134Q5TEV5 83 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 RPRMLQ8N4K4 120 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 C14orf178Q8N769 122 aaPredicted RBP4.81□□□□□ -1.64
CDH9-202ENST00000505020 LINC01600Q96MT4 127 aa4.81□□□□□ -1.64
CDH9-202ENST00000505020 ANKRD12Q6UB98 2062 aa4.8□□□□□ -1.64
CDH9-202ENST00000505020 RREB1Q92766 1687 aa4.8□□□□□ -1.64
CDH9-202ENST00000505020 NDUFC1O43677 76 aa4.8□□□□□ -1.64
CDH9-202ENST00000505020 LYZL1Q6UWQ5 148 aa4.8□□□□□ -1.64
CDH9-202ENST00000505020 LYZL2Q7Z4W2 148 aa4.8□□□□□ -1.64
CDH9-202ENST00000505020 LINC01560Q8TB33 94 aa4.8□□□□□ -1.64
CDH9-202ENST00000505020 NHP2Q9NX24 153 aaKnown RBP4.8□□□□□ -1.64
CDH9-202ENST00000505020 THADAQ6YHU6 1953 aa4.8□□□□□ -1.64
CDH9-202ENST00000505020 RGPD2P0DJD1 1756 aa4.8□□□□□ -1.64
CDH9-202ENST00000505020 CEP350Q5VT06 3117 aa4.8□□□□□ -1.64
CDH9-202ENST00000505020 IGLV1-44P01699 117 aa4.79□□□□□ -1.64
CDH9-202ENST00000505020 HOXB6P17509 224 aaKnown RBP4.79□□□□□ -1.64
CDH9-202ENST00000505020 EFNA4P52798 201 aa4.79□□□□□ -1.64
CDH9-202ENST00000505020 ZNF117Q03924 483 aa4.79□□□□□ -1.64
CDH9-202ENST00000505020 RPL7L1Q6DKI1 246 aaKnown RBP4.79□□□□□ -1.64
CDH9-202ENST00000505020 LYPD5Q6UWN5 251 aa4.79□□□□□ -1.64
CDH9-202ENST00000505020 MUC7Q8TAX7 377 aa4.79□□□□□ -1.64
CDH9-202ENST00000505020 C16orf74Q96GX8 76 aa4.79□□□□□ -1.64
CDH9-202ENST00000505020 EXPH5Q8NEV8 1989 aa4.79□□□□□ -1.64
CDH9-202ENST00000505020 NUP188Q5SRE5 1749 aa4.79□□□□□ -1.64
CDH9-202ENST00000505020 IGKV1OR2-108A0A075B7D4 117 aa4.79□□□□□ -1.64
CDH9-202ENST00000505020 F2Z2F3 143 aa4.79□□□□□ -1.64
CDH9-202ENST00000505020 CYP2G1PQ6ZSU1 146 aa4.79□□□□□ -1.64
CDH9-202ENST00000505020 USP32Q8NFA0 1604 aa4.79□□□□□ -1.64
CDH9-202ENST00000505020 ARFGEF2Q9Y6D5 1785 aa4.78□□□□□ -1.64
CDH9-202ENST00000505020 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.78□□□□□ -1.64
CDH9-202ENST00000505020 A8MUU9 505 aa4.78□□□□□ -1.64
CDH9-202ENST00000505020 C17orf98A8MV24 154 aa4.78□□□□□ -1.64
CDH9-202ENST00000505020 CRPP02741 224 aa4.78□□□□□ -1.64
CDH9-202ENST00000505020 CLPSP04118 112 aa4.78□□□□□ -1.64
CDH9-202ENST00000505020 ZNF22P17026 224 aaPredicted RBP4.78□□□□□ -1.64
CDH9-202ENST00000505020 CD24P25063 80 aa4.78□□□□□ -1.64
CDH9-202ENST00000505020 ZNF79Q15937 498 aa4.78□□□□□ -1.64
CDH9-202ENST00000505020 ZNRD1Q9P1U0 126 aa4.78□□□□□ -1.64
CDH9-202ENST00000505020 NEXMIFQ5QGS0 1516 aa4.78□□□□□ -1.64
CDH9-202ENST00000505020 KCPQ6ZWJ8 1503 aa4.77□□□□□ -1.65
CDH9-202ENST00000505020 C16orf90A8MZG2 172 aa4.77□□□□□ -1.65
CDH9-202ENST00000505020 C5orf67F2Z3F1 127 aa4.77□□□□□ -1.65
CDH9-202ENST00000505020 CXCL8P10145 99 aa4.77□□□□□ -1.65
CDH9-202ENST00000505020 C9orf47Q6ZRZ4 202 aa4.77□□□□□ -1.65
CDH9-202ENST00000505020 TRAPPC1Q9Y5R8 145 aa4.77□□□□□ -1.65
CDH9-202ENST00000505020 ITSN1Q15811 1721 aa4.77□□□□□ -1.65
CDH9-202ENST00000505020 MYOM1P52179 1685 aa4.77□□□□□ -1.65
CDH9-202ENST00000505020 NACAE9PAV3 2078 aa4.77□□□□□ -1.65
CDH9-202ENST00000505020 USP54Q70EL1 1684 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 GCC2Q8IWJ2 1684 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 IGKV1D-37A0A075B6S9 117 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 TCRBV4S1A1TA0A5B7 111 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 GIG44P09565 113 aaPredicted RBP4.76□□□□□ -1.65
CDH9-202ENST00000505020 Q6ZQT0 140 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 V9GYH0 126 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 KIAA2026Q5HYC2 2103 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 TRAV7A0A075B6U4 112 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 TRAV13-2A0A0B4J235 113 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 IGHV3-64DA0A0J9YX35 117 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 A0A1B0GUV1 79 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 H7BZZ5 65 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 DNAH10OSP0CZ25 163 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 PRB4P10163 310 aaPredicted RBP4.76□□□□□ -1.65
CDH9-202ENST00000505020 FAM27BQ5VT28 67 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 SCRT1Q9BWW7 348 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 TIMM9Q9Y5J7 89 aa4.76□□□□□ -1.65
CDH9-202ENST00000505020 PLCH1Q4KWH8 1693 aa4.75□□□□□ -1.65
CDH9-202ENST00000505020 TRBV10-2A0A0K0K1G8 114 aa4.75□□□□□ -1.65
CDH9-202ENST00000505020 ACYP1P07311 99 aa4.75□□□□□ -1.65
CDH9-202ENST00000505020 Q1RN00 199 aa4.75□□□□□ -1.65
CDH9-202ENST00000505020 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
CDH9-202ENST00000505020 SPTSSBQ8NFR3 76 aa4.75□□□□□ -1.65
CDH9-202ENST00000505020 LITAFQ99732 161 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms