RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 SH2D1AO60880 128 aa9.78□□□□□ -0.84
HOXC9-202ENST00000504557 LGALSLQ3ZCW2 172 aaPredicted RBP9.78□□□□□ -0.84
HOXC9-202ENST00000504557 CFAP126Q5VTH2 177 aa9.78□□□□□ -0.84
HOXC9-202ENST00000504557 MBD3L1Q8WWY6 194 aa9.78□□□□□ -0.84
HOXC9-202ENST00000504557 BOLA1Q9Y3E2 137 aa9.78□□□□□ -0.84
HOXC9-202ENST00000504557 SCO2A0A1W2PP80 73 aa9.77□□□□□ -0.85
HOXC9-202ENST00000504557 CRIP1P50238 77 aa9.77□□□□□ -0.85
HOXC9-202ENST00000504557 ZNF575Q86XF7 245 aa9.77□□□□□ -0.85
HOXC9-202ENST00000504557 TXNDC17Q9BRA2 123 aa9.77□□□□□ -0.85
HOXC9-202ENST00000504557 RS1O15537 224 aa9.76□□□□□ -0.85
HOXC9-202ENST00000504557 GATA1P15976 413 aaPredicted RBP9.76□□□□□ -0.85
HOXC9-202ENST00000504557 FAM162BQ5T6X4 162 aa9.76□□□□□ -0.85
HOXC9-202ENST00000504557 WFDC10BQ8IUB3 73 aa9.76□□□□□ -0.85
HOXC9-202ENST00000504557 SLC25A29Q8N8R3 303 aa9.76□□□□□ -0.85
HOXC9-202ENST00000504557 GNG13Q9P2W3 67 aa9.76□□□□□ -0.85
HOXC9-202ENST00000504557 ZFP30Q9Y2G7 519 aa9.76□□□□□ -0.85
HOXC9-202ENST00000504557 LTAP01374 205 aa9.75□□□□□ -0.85
HOXC9-202ENST00000504557 LINC00315P59091 139 aa9.75□□□□□ -0.85
HOXC9-202ENST00000504557 CCL20P78556 96 aa9.75□□□□□ -0.85
HOXC9-202ENST00000504557 PRADC1Q9BSG0 188 aa9.75□□□□□ -0.85
HOXC9-202ENST00000504557 JPT2Q9H910 190 aa9.75□□□□□ -0.85
HOXC9-202ENST00000504557 TNFRSF18Q9Y5U5 241 aa9.75□□□□□ -0.85
HOXC9-202ENST00000504557 PKHD1P08F94 4074 aa9.74□□□□□ -0.85
HOXC9-202ENST00000504557 A0A1W2PPQ1 181 aa9.74□□□□□ -0.85
HOXC9-202ENST00000504557 KRBOX1C9JBD0 128 aa9.74□□□□□ -0.85
HOXC9-202ENST00000504557 ARMS2P0C7Q2 107 aa9.74□□□□□ -0.85
HOXC9-202ENST00000504557 PRR27Q6MZM9 219 aa9.74□□□□□ -0.85
HOXC9-202ENST00000504557 TCTE3Q8IZS6 198 aa9.74□□□□□ -0.85
HOXC9-202ENST00000504557 TCEAL7Q9BRU2 100 aa9.74□□□□□ -0.85
HOXC9-202ENST00000504557 M0R381 172 aa9.73□□□□□ -0.85
HOXC9-202ENST00000504557 RHOHQ15669 191 aa9.73□□□□□ -0.85
HOXC9-202ENST00000504557 FAM74A4Q5TZK3 123 aa9.73□□□□□ -0.85
HOXC9-202ENST00000504557 Q6ZNX1 250 aa9.73□□□□□ -0.85
HOXC9-202ENST00000504557 PARLQ9H300 379 aa9.73□□□□□ -0.85
HOXC9-202ENST00000504557 LY96Q9Y6Y9 160 aa9.73□□□□□ -0.85
HOXC9-202ENST00000504557 PKD1P98161 4303 aa9.72□□□□□ -0.85
HOXC9-202ENST00000504557 C16orf90A8MZG2 172 aa9.72□□□□□ -0.85
HOXC9-202ENST00000504557 C1QBP02746 253 aa9.72□□□□□ -0.85
HOXC9-202ENST00000504557 RPL19P84098 196 aaKnown RBP9.72□□□□□ -0.85
HOXC9-202ENST00000504557 ZNF674Q2M3X9 581 aa9.72□□□□□ -0.85
HOXC9-202ENST00000504557 DMRTA1Q5VZB9 504 aa9.72□□□□□ -0.85
HOXC9-202ENST00000504557 EIF5AL1Q6IS14 154 aaKnown RBP9.72□□□□□ -0.85
HOXC9-202ENST00000504557 Q6ZSN1 163 aa9.72□□□□□ -0.85
HOXC9-202ENST00000504557 AKAP14Q86UN6 197 aa9.72□□□□□ -0.85
HOXC9-202ENST00000504557 BAGE2Q86Y30 109 aa9.72□□□□□ -0.85
HOXC9-202ENST00000504557 SYT8Q8NBV8 401 aa9.72□□□□□ -0.85
HOXC9-202ENST00000504557 SAMD10Q9BYL1 202 aa9.72□□□□□ -0.85
HOXC9-202ENST00000504557 IL36BQ9NZH7 164 aa9.72□□□□□ -0.85
HOXC9-202ENST00000504557 PHLDA3Q9Y5J5 127 aa9.72□□□□□ -0.85
HOXC9-202ENST00000504557 A0A087WWL8 130 aa9.71□□□□□ -0.86
HOXC9-202ENST00000504557 TRBV6-1A0A0K0K1D8 114 aa9.71□□□□□ -0.86
HOXC9-202ENST00000504557 GAGE12JA6NER3 117 aa9.71□□□□□ -0.86
HOXC9-202ENST00000504557 A8MWV9 139 aa9.71□□□□□ -0.86
HOXC9-202ENST00000504557 MGST1P10620 155 aaKnown RBP9.71□□□□□ -0.86
HOXC9-202ENST00000504557 SSTP61278 116 aa9.71□□□□□ -0.86
HOXC9-202ENST00000504557 GAGE1Q13065 139 aa9.71□□□□□ -0.86
HOXC9-202ENST00000504557 GAGE4Q13068 117 aa9.71□□□□□ -0.86
HOXC9-202ENST00000504557 GAGE5Q13069 117 aa9.71□□□□□ -0.86
HOXC9-202ENST00000504557 GAGE13Q4V321 117 aa9.71□□□□□ -0.86
HOXC9-202ENST00000504557 OR10J3Q5JRS4 329 aa9.71□□□□□ -0.86
HOXC9-202ENST00000504557 SPATA12Q7Z6I5 190 aa9.71□□□□□ -0.86
HOXC9-202ENST00000504557 MANBALQ9NQG1 85 aa9.71□□□□□ -0.86
HOXC9-202ENST00000504557 TRAV9-2A0A087WT02 112 aa9.7□□□□□ -0.86
HOXC9-202ENST00000504557 TRBV6-4A0A1B0GX49 114 aa9.7□□□□□ -0.86
HOXC9-202ENST00000504557 TEX46H3BTG2 121 aa9.7□□□□□ -0.86
HOXC9-202ENST00000504557 S100A9P06702 114 aaKnown RBP9.7□□□□□ -0.86
HOXC9-202ENST00000504557 EVI2AP22794 236 aa9.7□□□□□ -0.86
HOXC9-202ENST00000504557 LINC01559Q495D7 138 aa9.7□□□□□ -0.86
HOXC9-202ENST00000504557 SH2D6Q7Z4S9 175 aa9.7□□□□□ -0.86
HOXC9-202ENST00000504557 PTH2Q96A98 100 aa9.7□□□□□ -0.86
HOXC9-202ENST00000504557 DERL1Q9BUN8 251 aa9.7□□□□□ -0.86
HOXC9-202ENST00000504557 MUC21A0A0G2JKD1 596 aa9.69□□□□□ -0.86
HOXC9-202ENST00000504557 MUC21A0A140T8X8 626 aa9.69□□□□□ -0.86
HOXC9-202ENST00000504557 CIDEAO60543 219 aa9.69□□□□□ -0.86
HOXC9-202ENST00000504557 RPL35P42766 123 aaKnown RBP9.69□□□□□ -0.86
HOXC9-202ENST00000504557 SULT1A2P50226 295 aa9.69□□□□□ -0.86
HOXC9-202ENST00000504557 RAB5CP51148 216 aa9.69□□□□□ -0.86
HOXC9-202ENST00000504557 COX8CQ7Z4L0 72 aa9.69□□□□□ -0.86
HOXC9-202ENST00000504557 SLC51BQ86UW2 128 aa9.69□□□□□ -0.86
HOXC9-202ENST00000504557 C14orf178Q8N769 122 aaPredicted RBP9.69□□□□□ -0.86
HOXC9-202ENST00000504557 ATP6V0E2Q8NHE4 81 aa9.69□□□□□ -0.86
HOXC9-202ENST00000504557 KIAA1109Q2LD37 5005 aa9.68□□□□□ -0.86
HOXC9-202ENST00000504557 TRAV8-6A0A0B4J262 113 aa9.68□□□□□ -0.86
HOXC9-202ENST00000504557 IGHV3-30P01768 117 aa9.68□□□□□ -0.86
HOXC9-202ENST00000504557 IGHV3-33P01772 117 aa9.68□□□□□ -0.86
HOXC9-202ENST00000504557 CRYGDP07320 174 aa9.68□□□□□ -0.86
HOXC9-202ENST00000504557 IGHV3-30-3P0DP02 117 aa9.68□□□□□ -0.86
HOXC9-202ENST00000504557 IGHV3-30-5P0DP03 117 aa9.68□□□□□ -0.86
HOXC9-202ENST00000504557 MED14OSP0DP75 135 aa9.68□□□□□ -0.86
HOXC9-202ENST00000504557 FUSP35637 526 aaKnown RBP eCLIP9.68□□□□□ -0.866e-7■■■□□ 18.2
HOXC9-202ENST00000504557 Q9UF83 564 aa9.68□□□□□ -0.86
HOXC9-202ENST00000504557 IGHV3-38A0A0C4DH36 116 aa9.67□□□□□ -0.86
HOXC9-202ENST00000504557 CENPWQ5EE01 88 aa9.67□□□□□ -0.86
HOXC9-202ENST00000504557 DNLZQ5SXM8 178 aa9.67□□□□□ -0.86
HOXC9-202ENST00000504557 ZFP2Q6ZN57 461 aa9.67□□□□□ -0.86
HOXC9-202ENST00000504557 ZFP82Q8N141 532 aa9.67□□□□□ -0.86
HOXC9-202ENST00000504557 MSRB1Q9NZV6 116 aa9.67□□□□□ -0.86
HOXC9-202ENST00000504557 TRAV1-1A0A0B4J248 108 aa9.66□□□□□ -0.86
HOXC9-202ENST00000504557 RAB19A4D1S5 217 aa9.66□□□□□ -0.86
HOXC9-202ENST00000504557 IFNA1P01562 189 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms