RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 C11orf1Q9H5F2 150 aa10.07□□□□□ -0.8
PDLIM7-210ENST00000503827 LYRM2Q9NU23 88 aaPredicted RBP10.07□□□□□ -0.8
PDLIM7-210ENST00000503827 Q9UF83 564 aa10.07□□□□□ -0.8
PDLIM7-210ENST00000503827 IGSF23A1L1A6 192 aa10.06□□□□□ -0.8
PDLIM7-210ENST00000503827 A8MWV9 139 aa10.06□□□□□ -0.8
PDLIM7-210ENST00000503827 CCSO14618 274 aa10.06□□□□□ -0.8
PDLIM7-210ENST00000503827 SMIM18P0DKX4 95 aa10.06□□□□□ -0.8
PDLIM7-210ENST00000503827 TMEM252Q8N6L7 170 aa10.06□□□□□ -0.8
PDLIM7-210ENST00000503827 TVP23CQ96ET8 276 aa10.06□□□□□ -0.8
PDLIM7-210ENST00000503827 LINC00479Q96M42 142 aa10.06□□□□□ -0.8
PDLIM7-210ENST00000503827 FAM25EA8MYX2 175 aa10.05□□□□□ -0.8
PDLIM7-210ENST00000503827 CIRBPQ14011 172 aaKnown RBP10.05□□□□□ -0.8
PDLIM7-210ENST00000503827 FAM74A1Q5RGS3 127 aa10.05□□□□□ -0.8
PDLIM7-210ENST00000503827 ENHOQ6UWT2 76 aa10.05□□□□□ -0.8
PDLIM7-210ENST00000503827 GOLT1AQ6ZVE7 132 aa10.05□□□□□ -0.8
PDLIM7-210ENST00000503827 A0A0J9YXV3 536 aa10.04□□□□□ -0.8
PDLIM7-210ENST00000503827 NAP1L6A6NFF2 107 aa10.04□□□□□ -0.8
PDLIM7-210ENST00000503827 TAAR5O14804 337 aa10.04□□□□□ -0.8
PDLIM7-210ENST00000503827 C14orf178Q8N769 122 aaPredicted RBP10.04□□□□□ -0.8
PDLIM7-210ENST00000503827 THAP6Q8TBB0 222 aa10.04□□□□□ -0.8
PDLIM7-210ENST00000503827 RNF185Q96GF1 192 aa10.04□□□□□ -0.8
PDLIM7-210ENST00000503827 BCL7BQ9BQE9 202 aa10.04□□□□□ -0.8
PDLIM7-210ENST00000503827 OTORQ9NRC9 128 aa10.04□□□□□ -0.8
PDLIM7-210ENST00000503827 KCNIP2Q9NS61 270 aa10.04□□□□□ -0.8
PDLIM7-210ENST00000503827 V9GYH0 126 aa10.04□□□□□ -0.8
PDLIM7-210ENST00000503827 TMEM262E9PQX1 116 aa10.03□□□□□ -0.8
PDLIM7-210ENST00000503827 LGALSLQ3ZCW2 172 aaPredicted RBP10.03□□□□□ -0.8
PDLIM7-210ENST00000503827 C7orf33Q8WU49 177 aa10.03□□□□□ -0.8
PDLIM7-210ENST00000503827 NDFIP1Q9BT67 221 aa10.03□□□□□ -0.8
PDLIM7-210ENST00000503827 C11orf21Q9P2W6 132 aa10.03□□□□□ -0.8
PDLIM7-210ENST00000503827 A0A087WYN8 130 aa10.02□□□□□ -0.81
PDLIM7-210ENST00000503827 PHOX2AO14813 284 aa10.02□□□□□ -0.81
PDLIM7-210ENST00000503827 RNASE3P12724 160 aaKnown RBP10.02□□□□□ -0.81
PDLIM7-210ENST00000503827 KRTAP10-8P60410 259 aa10.02□□□□□ -0.81
PDLIM7-210ENST00000503827 S100A10P60903 97 aa10.02□□□□□ -0.81
PDLIM7-210ENST00000503827 PIK3CD-AS1Q5SR53 167 aa10.02□□□□□ -0.81
PDLIM7-210ENST00000503827 WDR73Q6P4I2 378 aa10.02□□□□□ -0.81
PDLIM7-210ENST00000503827 ARL6IP6Q8N6S5 226 aa10.02□□□□□ -0.81
PDLIM7-210ENST00000503827 C15orf54Q8N8G6 183 aa10.02□□□□□ -0.81
PDLIM7-210ENST00000503827 OR2G3Q8NGZ4 309 aa10.02□□□□□ -0.81
PDLIM7-210ENST00000503827 TMBIM6P55061 237 aa10.01□□□□□ -0.81
PDLIM7-210ENST00000503827 KHDC3LQ587J8 217 aa10.01□□□□□ -0.81
PDLIM7-210ENST00000503827 TMEM75Q8N9X5 138 aa10.01□□□□□ -0.81
PDLIM7-210ENST00000503827 OR10G7Q8NGN6 311 aa10.01□□□□□ -0.81
PDLIM7-210ENST00000503827 ANGP03950 147 aaKnown RBP10□□□□□ -0.81
PDLIM7-210ENST00000503827 ZNF80P51504 273 aaPredicted RBP10□□□□□ -0.81
PDLIM7-210ENST00000503827 TAS2R45P59539 299 aa10□□□□□ -0.81
PDLIM7-210ENST00000503827 MRPS26Q9BYN8 205 aaKnown RBP10□□□□□ -0.81
PDLIM7-210ENST00000503827 MBD2Q9UBB5 411 aa10□□□□□ -0.81
PDLIM7-210ENST00000503827 KIF25-AS1Q9Y6Z4 181 aa10□□□□□ -0.81
PDLIM7-210ENST00000503827 KRTAP9-6A0A140TA67 174 aa9.99□□□□□ -0.81
PDLIM7-210ENST00000503827 C17orf112F2Z3M2 114 aa9.99□□□□□ -0.81
PDLIM7-210ENST00000503827 RHODO00212 210 aa9.99□□□□□ -0.81
PDLIM7-210ENST00000503827 GCGP01275 180 aa9.99□□□□□ -0.81
PDLIM7-210ENST00000503827 S100A4P26447 101 aaKnown RBP9.99□□□□□ -0.81
PDLIM7-210ENST00000503827 MIAQ16674 131 aa9.99□□□□□ -0.81
PDLIM7-210ENST00000503827 UFSP1Q6NVU6 142 aa9.99□□□□□ -0.81
PDLIM7-210ENST00000503827 CLRN3Q8NCR9 226 aa9.99□□□□□ -0.81
PDLIM7-210ENST00000503827 JPT2Q9H910 190 aa9.99□□□□□ -0.81
PDLIM7-210ENST00000503827 IGHV3-64A0A075B6Q5 118 aa9.98□□□□□ -0.81
PDLIM7-210ENST00000503827 S100A5P33763 92 aa9.98□□□□□ -0.81
PDLIM7-210ENST00000503827 NHLH2Q02577 135 aa9.98□□□□□ -0.81
PDLIM7-210ENST00000503827 RAB32Q13637 225 aa9.98□□□□□ -0.81
PDLIM7-210ENST00000503827 REG3GQ6UW15 175 aa9.98□□□□□ -0.81
PDLIM7-210ENST00000503827 OR5C1Q8NGR4 320 aa9.98□□□□□ -0.81
PDLIM7-210ENST00000503827 SGK494Q96LW2 274 aa9.98□□□□□ -0.81
PDLIM7-210ENST00000503827 OR5AC2Q9NZP5 309 aa9.98□□□□□ -0.81
PDLIM7-210ENST00000503827 CENPXA8MT69 81 aa9.97□□□□□ -0.81
PDLIM7-210ENST00000503827 NOL3O60936 208 aaKnown RBP9.97□□□□□ -0.81
PDLIM7-210ENST00000503827 CHTF8P0CG12 524 aa9.97□□□□□ -0.81
PDLIM7-210ENST00000503827 CNBPP62633 177 aaKnown RBP9.97□□□□□ -0.81
PDLIM7-210ENST00000503827 GNG5P63218 68 aa9.97□□□□□ -0.81
PDLIM7-210ENST00000503827 CNPY1Q3B7I2 92 aa9.97□□□□□ -0.81
PDLIM7-210ENST00000503827 ZFP69Q49AA0 526 aa9.97□□□□□ -0.81
PDLIM7-210ENST00000503827 MPV17L2Q567V2 206 aa9.97□□□□□ -0.81
PDLIM7-210ENST00000503827 SPACA4Q8TDM5 124 aa9.97□□□□□ -0.81
PDLIM7-210ENST00000503827 WDR61Q9GZS3 305 aaKnown RBP9.97□□□□□ -0.81
PDLIM7-210ENST00000503827 PLAC8Q9NZF1 115 aa9.97□□□□□ -0.81
PDLIM7-210ENST00000503827 RPL36AP83881 106 aaKnown RBP9.96□□□□□ -0.82
PDLIM7-210ENST00000503827 TRIQKQ629K1 86 aa9.96□□□□□ -0.82
PDLIM7-210ENST00000503827 RPL36ALQ969Q0 106 aaKnown RBP9.96□□□□□ -0.82
PDLIM7-210ENST00000503827 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.95□□□□□ -0.82
PDLIM7-210ENST00000503827 SERTM2A0A1B0GWG4 89 aa9.95□□□□□ -0.82
PDLIM7-210ENST00000503827 PRR3P79522 188 aaKnown RBP9.95□□□□□ -0.82
PDLIM7-210ENST00000503827 SMUG1Q53HV7 270 aa9.95□□□□□ -0.82
PDLIM7-210ENST00000503827 FAM74A4Q5TZK3 123 aa9.95□□□□□ -0.82
PDLIM7-210ENST00000503827 LPAP08519 4548 aa9.94□□□□□ -0.82
PDLIM7-210ENST00000503827 TRBV6-8A0A0A6YYG3 113 aa9.94□□□□□ -0.82
PDLIM7-210ENST00000503827 TRBV10-1A0A0K0K1A3 114 aa9.94□□□□□ -0.82
PDLIM7-210ENST00000503827 hDV102S1A0JD36 115 aa9.94□□□□□ -0.82
PDLIM7-210ENST00000503827 H3BMQ9 156 aa9.94□□□□□ -0.82
PDLIM7-210ENST00000503827 BTCP35070 178 aa9.94□□□□□ -0.82
PDLIM7-210ENST00000503827 UBE2D3P61077 147 aa9.94□□□□□ -0.82
PDLIM7-210ENST00000503827 PKIAP61925 76 aa9.94□□□□□ -0.82
PDLIM7-210ENST00000503827 UBE2D2P62837 147 aa9.94□□□□□ -0.82
PDLIM7-210ENST00000503827 SPINK6Q6UWN8 80 aa9.94□□□□□ -0.82
PDLIM7-210ENST00000503827 GTSF1Q8WW33 167 aa9.94□□□□□ -0.82
PDLIM7-210ENST00000503827 AP5S1Q9NUS5 200 aa9.94□□□□□ -0.82
PDLIM7-210ENST00000503827 TRBV7-3A0A075B6L6 115 aa9.93□□□□□ -0.82
PDLIM7-210ENST00000503827 A0A087WWL8 130 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms