RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 LOC389332A0A1B0GUA5 103 aa15.86■□□□□ 0.13
UBE2D3-216ENST00000503742 GAS8-AS1O95177 125 aa15.86■□□□□ 0.13
UBE2D3-216ENST00000503742 BTF3P20290 206 aaKnown RBP15.86■□□□□ 0.13
UBE2D3-216ENST00000503742 DEFB114Q30KQ6 69 aa15.86■□□□□ 0.13
UBE2D3-216ENST00000503742 CITED2Q99967 270 aaPredicted RBP15.86■□□□□ 0.13
UBE2D3-216ENST00000503742 UQCR10Q9UDW1 63 aa15.86■□□□□ 0.13
UBE2D3-216ENST00000503742 SORL1Q92673 2214 aa15.86■□□□□ 0.13
UBE2D3-216ENST00000503742 TRAV12-3A0A0B4J271 114 aa15.86■□□□□ 0.13
UBE2D3-216ENST00000503742 TCF21O43680 179 aa15.86■□□□□ 0.13
UBE2D3-216ENST00000503742 LEPROTL1O95214 131 aa15.86■□□□□ 0.13
UBE2D3-216ENST00000503742 AMTNQ6UX39 209 aa15.86■□□□□ 0.13
UBE2D3-216ENST00000503742 TIMM8BQ9Y5J9 83 aaPredicted RBP15.86■□□□□ 0.13
UBE2D3-216ENST00000503742 TSSC4Q9Y5U2 329 aaPredicted RBP15.86■□□□□ 0.13
UBE2D3-216ENST00000503742 CCL24O00175 119 aa15.85■□□□□ 0.13
UBE2D3-216ENST00000503742 IGKV3-20P01619 116 aa15.85■□□□□ 0.13
UBE2D3-216ENST00000503742 CDKN1BP46527 198 aa15.85■□□□□ 0.13
UBE2D3-216ENST00000503742 SPATA45Q537H7 98 aa15.85■□□□□ 0.13
UBE2D3-216ENST00000503742 FAM159AQ6UWV7 190 aa15.85■□□□□ 0.13
UBE2D3-216ENST00000503742 LINC00173Q6ZV60 143 aa15.85■□□□□ 0.13
UBE2D3-216ENST00000503742 A0A1W2PRX2 142 aa15.84■□□□□ 0.13
UBE2D3-216ENST00000503742 NDUFA7O95182 113 aa15.84■□□□□ 0.13
UBE2D3-216ENST00000503742 DYNLRB2Q8TF09 96 aa15.84■□□□□ 0.13
UBE2D3-216ENST00000503742 PHLDA3Q9Y5J5 127 aa15.84■□□□□ 0.13
UBE2D3-216ENST00000503742 A8MTW9 85 aa15.84■□□□□ 0.13
UBE2D3-216ENST00000503742 TSPOP30536 169 aa15.84■□□□□ 0.13
UBE2D3-216ENST00000503742 C20orf202A1L168 122 aa15.83■□□□□ 0.12
UBE2D3-216ENST00000503742 CRXO43186 299 aaPredicted RBP15.83■□□□□ 0.12
UBE2D3-216ENST00000503742 SPRY2O43597 315 aa15.83■□□□□ 0.12
UBE2D3-216ENST00000503742 TNFRSF6BO95407 300 aa15.83■□□□□ 0.12
UBE2D3-216ENST00000503742 DEFB131AP59861 70 aa15.83■□□□□ 0.12
UBE2D3-216ENST00000503742 TMEM70Q9BUB7 260 aa15.83■□□□□ 0.12
UBE2D3-216ENST00000503742 HIVEP2P31629 2446 aa15.83■□□□□ 0.12
UBE2D3-216ENST00000503742 A0A096LNJ9 63 aa15.82■□□□□ 0.12
UBE2D3-216ENST00000503742 NXPH4O95158 308 aa15.82■□□□□ 0.12
UBE2D3-216ENST00000503742 ZNF25P17030 456 aaPredicted RBP15.82■□□□□ 0.12
UBE2D3-216ENST00000503742 COL5A1-AS1Q5SY13 56 aa15.82■□□□□ 0.12
UBE2D3-216ENST00000503742 TRAV12-2A0A075B6T6 113 aa15.82■□□□□ 0.12
UBE2D3-216ENST00000503742 M0R381 172 aa15.82■□□□□ 0.12
UBE2D3-216ENST00000503742 GATA1P15976 413 aaPredicted RBP15.82■□□□□ 0.12
UBE2D3-216ENST00000503742 SPINK13Q1W4C9 94 aa15.82■□□□□ 0.12
UBE2D3-216ENST00000503742 CD300EQ496F6 205 aaPredicted RBP15.82■□□□□ 0.12
UBE2D3-216ENST00000503742 MAP1LC3AQ9H492 121 aa15.82■□□□□ 0.12
UBE2D3-216ENST00000503742 LINC01546A6NGU7 62 aa15.81■□□□□ 0.12
UBE2D3-216ENST00000503742 DLEU1O43261 78 aa15.81■□□□□ 0.12
UBE2D3-216ENST00000503742 IGLC3P0DOY3 106 aa15.81■□□□□ 0.12
UBE2D3-216ENST00000503742 HLA-DRB4P13762 266 aa15.81■□□□□ 0.12
UBE2D3-216ENST00000503742 SPATA12Q7Z6I5 190 aa15.81■□□□□ 0.12
UBE2D3-216ENST00000503742 JMJD8Q96S16 334 aa15.81■□□□□ 0.12
UBE2D3-216ENST00000503742 HSPB8Q9UJY1 196 aa15.81■□□□□ 0.12
UBE2D3-216ENST00000503742 HLA-DRB4X5D2U9 266 aa15.81■□□□□ 0.12
UBE2D3-216ENST00000503742 OTOGQ6ZRI0 2925 aa15.81■□□□□ 0.12
UBE2D3-216ENST00000503742 KNCNA6PVL3 124 aa15.8■□□□□ 0.12
UBE2D3-216ENST00000503742 NRACQ8N912 160 aa15.8■□□□□ 0.12
UBE2D3-216ENST00000503742 MUC4Q99102 2169 aa15.8■□□□□ 0.12
UBE2D3-216ENST00000503742 SYS1-DBNDD2H3BUS1 97 aa15.8■□□□□ 0.12
UBE2D3-216ENST00000503742 G0S2P27469 103 aa15.8■□□□□ 0.12
UBE2D3-216ENST00000503742 TMEM208Q9BTX3 173 aa15.8■□□□□ 0.12
UBE2D3-216ENST00000503742 ZNF256Q9Y2P7 627 aaPredicted RBP15.8■□□□□ 0.12
UBE2D3-216ENST00000503742 PRSS47A8MTI9 375 aa15.79■□□□□ 0.12
UBE2D3-216ENST00000503742 H3BMM0 161 aa15.79■□□□□ 0.12
UBE2D3-216ENST00000503742 DEFB125Q8N687 156 aa15.79■□□□□ 0.12
UBE2D3-216ENST00000503742 OR2K2Q8NGT1 345 aa15.79■□□□□ 0.12
UBE2D3-216ENST00000503742 MRAP2Q96G30 205 aa15.79■□□□□ 0.12
UBE2D3-216ENST00000503742 SPAG8Q99932 426 aaPredicted RBP15.79■□□□□ 0.12
UBE2D3-216ENST00000503742 MAP6D1Q9H9H5 199 aa15.79■□□□□ 0.12
UBE2D3-216ENST00000503742 TRAV25A0A0B4J276 109 aa15.78■□□□□ 0.12
UBE2D3-216ENST00000503742 CD7P09564 240 aa15.78■□□□□ 0.12
UBE2D3-216ENST00000503742 PROK1P58294 105 aa15.78■□□□□ 0.12
UBE2D3-216ENST00000503742 DPH3P1Q9H4G8 78 aa15.78■□□□□ 0.12
UBE2D3-216ENST00000503742 ZNF747Q9BV97 191 aa15.78■□□□□ 0.12
UBE2D3-216ENST00000503742 TRAV26-2A0A0B4J265 109 aa15.77■□□□□ 0.12
UBE2D3-216ENST00000503742 IGHV3-16A0A0C4DH30 117 aa15.77■□□□□ 0.12
UBE2D3-216ENST00000503742 OR4C46A6NHA9 309 aa15.77■□□□□ 0.12
UBE2D3-216ENST00000503742 MAP1LC3CQ9BXW4 147 aa15.77■□□□□ 0.12
UBE2D3-216ENST00000503742 NXT2Q9NPJ8 142 aaKnown RBP15.77■□□□□ 0.12
UBE2D3-216ENST00000503742 IGLV2-18A0A075B6J9 118 aa15.76■□□□□ 0.11
UBE2D3-216ENST00000503742 IGHV1OR15-1A0A075B7D0 117 aa15.76■□□□□ 0.11
UBE2D3-216ENST00000503742 HNRNPA3P51991 378 aaKnown RBP15.76■□□□□ 0.11
UBE2D3-216ENST00000503742 C9orf85Q96MD7 179 aa15.76■□□□□ 0.11
UBE2D3-216ENST00000503742 GOLT1BQ9Y3E0 138 aa15.76■□□□□ 0.11
UBE2D3-216ENST00000503742 RBMY1BA6NDE4 496 aaKnown RBP15.76■□□□□ 0.11
UBE2D3-216ENST00000503742 RBMY1EA6NEQ0 496 aaKnown RBP15.76■□□□□ 0.11
UBE2D3-216ENST00000503742 RBMY1DP0C7P1 496 aaKnown RBP15.76■□□□□ 0.11
UBE2D3-216ENST00000503742 C14orf178Q8N769 122 aaPredicted RBP15.76■□□□□ 0.11
UBE2D3-216ENST00000503742 AP1S3Q96PC3 154 aa15.76■□□□□ 0.11
UBE2D3-216ENST00000503742 NOTCH2Q04721 2471 aa15.76■□□□□ 0.11
UBE2D3-216ENST00000503742 ADARB2-AS1A8MUL3 147 aa15.75■□□□□ 0.11
UBE2D3-216ENST00000503742 PET117Q6UWS5 81 aa15.75■□□□□ 0.11
UBE2D3-216ENST00000503742 Q6ZN92 141 aa15.75■□□□□ 0.11
UBE2D3-216ENST00000503742 MRPS16Q9Y3D3 137 aaKnown RBP15.75■□□□□ 0.11
UBE2D3-216ENST00000503742 TRAV9-2A0A087WT02 112 aa15.75■□□□□ 0.11
UBE2D3-216ENST00000503742 HBDP02042 147 aa15.75■□□□□ 0.11
UBE2D3-216ENST00000503742 Q8N1Y9 231 aa15.75■□□□□ 0.11
UBE2D3-216ENST00000503742 POM121L12Q8N7R1 296 aa15.75■□□□□ 0.11
UBE2D3-216ENST00000503742 Q8N8P6 123 aa15.75■□□□□ 0.11
UBE2D3-216ENST00000503742 KIF25-AS1Q9Y6Z4 181 aa15.75■□□□□ 0.11
UBE2D3-216ENST00000503742 ATOH7Q8N100 152 aa15.74■□□□□ 0.11
UBE2D3-216ENST00000503742 MDFICQ9P1T7 246 aa15.74■□□□□ 0.11
UBE2D3-216ENST00000503742 RBMY1A1P0DJD3 496 aaKnown RBP15.73■□□□□ 0.11
UBE2D3-216ENST00000503742 RBMY1CP0DJD4 496 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms