RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 TFPI2P48307 235 aa9.02□□□□□ -0.96
NUP54-202ENST00000502850 KIR3DS1Q14943 382 aa9.02□□□□□ -0.96
NUP54-202ENST00000502850 FAM159AQ6UWV7 190 aa9.02□□□□□ -0.96
NUP54-202ENST00000502850 RNF152Q8N8N0 203 aa9.02□□□□□ -0.96
NUP54-202ENST00000502850 WFDC11Q8NEX6 87 aa9.02□□□□□ -0.96
NUP54-202ENST00000502850 TMEM158Q8WZ71 300 aa9.02□□□□□ -0.96
NUP54-202ENST00000502850 UBE2E2Q96LR5 201 aa9.02□□□□□ -0.96
NUP54-202ENST00000502850 MCRIP2Q9BUT9 160 aaKnown RBP9.02□□□□□ -0.96
NUP54-202ENST00000502850 SMIM2Q9BVW6 85 aa9.02□□□□□ -0.96
NUP54-202ENST00000502850 IGKV3-7A0A075B6H7 116 aa9.02□□□□□ -0.97
NUP54-202ENST00000502850 LINC01549A6NIU2 74 aa9.02□□□□□ -0.97
NUP54-202ENST00000502850 J3KRW8 73 aa9.02□□□□□ -0.97
NUP54-202ENST00000502850 DUSP14O95147 198 aaKnown RBP9.02□□□□□ -0.97
NUP54-202ENST00000502850 COX11Q9Y6N1 276 aa9.02□□□□□ -0.97
NUP54-202ENST00000502850 NUDT3O95989 172 aa9.01□□□□□ -0.97
NUP54-202ENST00000502850 PRSS1P07477 247 aa9.01□□□□□ -0.97
NUP54-202ENST00000502850 SMIM17P0DL12 118 aa9.01□□□□□ -0.97
NUP54-202ENST00000502850 SUMO2P61956 95 aaKnown RBP9.01□□□□□ -0.97
NUP54-202ENST00000502850 MPV17L2Q567V2 206 aa9.01□□□□□ -0.97
NUP54-202ENST00000502850 Q5PR19 223 aa9.01□□□□□ -0.97
NUP54-202ENST00000502850 BVES-AS1Q5T3Y7 98 aa9.01□□□□□ -0.97
NUP54-202ENST00000502850 BOD1L2Q8IYS8 172 aa9.01□□□□□ -0.97
NUP54-202ENST00000502850 C18orf15Q96N68 181 aa9.01□□□□□ -0.97
NUP54-202ENST00000502850 F6UB75 175 aa9□□□□□ -0.97
NUP54-202ENST00000502850 CD5LO43866 347 aa9□□□□□ -0.97
NUP54-202ENST00000502850 DPM2O94777 84 aa9□□□□□ -0.97
NUP54-202ENST00000502850 GATA1P15976 413 aaPredicted RBP9□□□□□ -0.97
NUP54-202ENST00000502850 SEC11AP67812 179 aa9□□□□□ -0.97
NUP54-202ENST00000502850 ODF1Q14990 250 aa9□□□□□ -0.97
NUP54-202ENST00000502850 KRTAP1-3Q8IUG1 177 aa9□□□□□ -0.97
NUP54-202ENST00000502850 POM121L12Q8N7R1 296 aa9□□□□□ -0.97
NUP54-202ENST00000502850 ZMAT4Q9H898 229 aa9□□□□□ -0.97
NUP54-202ENST00000502850 ZNF702PQ9H963 129 aa9□□□□□ -0.97
NUP54-202ENST00000502850 FLNAP21333 2647 aaKnown RBP8.99□□□□□ -0.97
NUP54-202ENST00000502850 C7orf71A4D174 169 aa8.99□□□□□ -0.97
NUP54-202ENST00000502850 K7EQG2 157 aa8.99□□□□□ -0.97
NUP54-202ENST00000502850 GAS8-AS1O95177 125 aa8.99□□□□□ -0.97
NUP54-202ENST00000502850 IGKCP01834 107 aa8.99□□□□□ -0.97
NUP54-202ENST00000502850 HLA-DRB4P13762 266 aa8.99□□□□□ -0.97
NUP54-202ENST00000502850 FXYD7P58549 80 aa8.99□□□□□ -0.97
NUP54-202ENST00000502850 RPL32P62910 135 aaKnown RBP8.99□□□□□ -0.97
NUP54-202ENST00000502850 ANKRD39Q53RE8 183 aa8.99□□□□□ -0.97
NUP54-202ENST00000502850 HLA-DRB4X5D2U9 266 aa8.99□□□□□ -0.97
NUP54-202ENST00000502850 TRAV26-2A0A0B4J265 109 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 FGF6P10767 208 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 RNASE3P12724 160 aaKnown RBP8.98□□□□□ -0.97
NUP54-202ENST00000502850 PLNP26678 52 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 Q6ZQT7 251 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 C2orf91Q6ZV80 131 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 SYT8Q8NBV8 401 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 CR1P17927 2039 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 TRAV2A0A0B4J234 112 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 TRAV12-1A0A0B4J245 112 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 A0A0J9YX75 114 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.98□□□□□ -0.97
NUP54-202ENST00000502850 HOXA3O43365 443 aaPredicted RBP8.98□□□□□ -0.97
NUP54-202ENST00000502850 MGPP08493 103 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 HSD52Q0P140 79 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 KRTAP21-3Q3LHN1 58 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 TMEM97Q5BJF2 176 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 WFDC3Q8IUB2 231 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 Q8N2B8 174 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 TMEM86BQ8N661 226 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 C14orf178Q8N769 122 aaPredicted RBP8.98□□□□□ -0.97
NUP54-202ENST00000502850 SMR3AQ99954 134 aa8.98□□□□□ -0.97
NUP54-202ENST00000502850 A6NDN8 102 aa8.97□□□□□ -0.97
NUP54-202ENST00000502850 ZNF688P0C7X2 276 aa8.97□□□□□ -0.97
NUP54-202ENST00000502850 SRD5A1P18405 259 aa8.97□□□□□ -0.97
NUP54-202ENST00000502850 HOXD3P31249 432 aaPredicted RBP8.97□□□□□ -0.97
NUP54-202ENST00000502850 SYNJ2BPP57105 145 aa8.97□□□□□ -0.97
NUP54-202ENST00000502850 DEFB1P60022 68 aa8.97□□□□□ -0.97
NUP54-202ENST00000502850 ZNF124Q15973 351 aa8.97□□□□□ -0.97
NUP54-202ENST00000502850 FOXI2Q6ZQN5 318 aa8.97□□□□□ -0.97
NUP54-202ENST00000502850 RASL10AQ92737 203 aa8.97□□□□□ -0.97
NUP54-202ENST00000502850 DKK2Q9UBU2 259 aa8.97□□□□□ -0.97
NUP54-202ENST00000502850 IGHV4OR15-8A0A075B7B6 117 aa8.96□□□□□ -0.98
NUP54-202ENST00000502850 A0A087WW49 117 aa8.96□□□□□ -0.98
NUP54-202ENST00000502850 A0A087WX48 190 aa8.96□□□□□ -0.98
NUP54-202ENST00000502850 GNRH2O43555 120 aa8.96□□□□□ -0.98
NUP54-202ENST00000502850 CD7P09564 240 aa8.96□□□□□ -0.98
NUP54-202ENST00000502850 CDKN1BP46527 198 aa8.96□□□□□ -0.98
NUP54-202ENST00000502850 NMUP48645 174 aa8.96□□□□□ -0.98
NUP54-202ENST00000502850 MAPK1IP1LQ8NDC0 245 aa8.96□□□□□ -0.98
NUP54-202ENST00000502850 TOMM6Q96B49 74 aa8.96□□□□□ -0.98
NUP54-202ENST00000502850 Q96MF0 132 aa8.96□□□□□ -0.98
NUP54-202ENST00000502850 PEMTQ9UBM1 199 aa8.96□□□□□ -0.98
NUP54-202ENST00000502850 NPSP0C0P6 89 aa8.95□□□□□ -0.98
NUP54-202ENST00000502850 HIGD1BQ9P298 99 aa8.95□□□□□ -0.98
NUP54-202ENST00000502850 NF1P21359 2839 aa8.95□□□□□ -0.98
NUP54-202ENST00000502850 TRGV11A0A075B6L2 103 aa8.94□□□□□ -0.98
NUP54-202ENST00000502850 TRAV12-3A0A0B4J271 114 aa8.94□□□□□ -0.98
NUP54-202ENST00000502850 H7C1H1 209 aa8.94□□□□□ -0.98
NUP54-202ENST00000502850 EDN2P20800 178 aa8.94□□□□□ -0.98
NUP54-202ENST00000502850 UBE2V1Q13404 147 aa8.94□□□□□ -0.98
NUP54-202ENST00000502850 C10orf99Q6UWK7 81 aa8.94□□□□□ -0.98
NUP54-202ENST00000502850 C9orf85Q96MD7 179 aa8.94□□□□□ -0.98
NUP54-202ENST00000502850 SCGB3A1Q96QR1 104 aa8.94□□□□□ -0.98
NUP54-202ENST00000502850 TP73-AS1Q9UF72 201 aa8.94□□□□□ -0.98
NUP54-202ENST00000502850 NIPBLQ6KC79 2804 aaeCLIP8.94□□□□□ -0.98
NUP54-202ENST00000502850 ZNF469Q96JG9 3925 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms