RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 C10orf99Q6UWK7 81 aa12.42□□□□□ -0.42
VCAN-204ENST00000502527 POM121L12Q8N7R1 296 aa12.42□□□□□ -0.42
VCAN-204ENST00000502527 RPL39LQ96EH5 51 aaKnown RBP12.42□□□□□ -0.42
VCAN-204ENST00000502527 HIGD1BQ9P298 99 aa12.42□□□□□ -0.42
VCAN-204ENST00000502527 H3BRM9 83 aa12.42□□□□□ -0.42
VCAN-204ENST00000502527 HLA-DRB4P13762 266 aa12.42□□□□□ -0.42
VCAN-204ENST00000502527 GTSCR1Q86UQ5 136 aa12.42□□□□□ -0.42
VCAN-204ENST00000502527 TOMM6Q96B49 74 aa12.42□□□□□ -0.42
VCAN-204ENST00000502527 HLA-DRB4X5D2U9 266 aa12.42□□□□□ -0.42
VCAN-204ENST00000502527 MAP1AP78559 2803 aaPredicted RBP12.42□□□□□ -0.42
VCAN-204ENST00000502527 TRAV12-1A0A0B4J245 112 aa12.41□□□□□ -0.42
VCAN-204ENST00000502527 SNRPD3P62318 126 aaKnown RBP12.41□□□□□ -0.42
VCAN-204ENST00000502527 ODF3Q96PU9 254 aa12.41□□□□□ -0.42
VCAN-204ENST00000502527 SCGB3A1Q96QR1 104 aa12.41□□□□□ -0.42
VCAN-204ENST00000502527 VPREB3Q9UKI3 123 aa12.41□□□□□ -0.42
VCAN-204ENST00000502527 CELSR2Q9HCU4 2923 aa12.4□□□□□ -0.42
VCAN-204ENST00000502527 H7C1H1 209 aa12.4□□□□□ -0.42
VCAN-204ENST00000502527 K7EP13 123 aa12.4□□□□□ -0.42
VCAN-204ENST00000502527 MAPK1IP1LQ8NDC0 245 aa12.4□□□□□ -0.42
VCAN-204ENST00000502527 TRAV8-6A0A0B4J262 113 aa12.39□□□□□ -0.43
VCAN-204ENST00000502527 LGALS1P09382 135 aaKnown RBP12.39□□□□□ -0.43
VCAN-204ENST00000502527 ZNF688P0C7X2 276 aa12.39□□□□□ -0.43
VCAN-204ENST00000502527 TRAV12-3A0A0B4J271 114 aa12.39□□□□□ -0.43
VCAN-204ENST00000502527 RNF223E7ERA6 249 aa12.39□□□□□ -0.43
VCAN-204ENST00000502527 ELANEP08246 267 aa12.39□□□□□ -0.43
VCAN-204ENST00000502527 KIF25-AS1Q9Y6Z4 181 aa12.39□□□□□ -0.43
VCAN-204ENST00000502527 MYO18BQ8IUG5 2567 aa12.39□□□□□ -0.43
VCAN-204ENST00000502527 C9orf118A6NHY6 69 aa12.38□□□□□ -0.43
VCAN-204ENST00000502527 F8VRH5 84 aa12.38□□□□□ -0.43
VCAN-204ENST00000502527 K7EQG2 157 aa12.38□□□□□ -0.43
VCAN-204ENST00000502527 LGALS9O00182 355 aa12.38□□□□□ -0.43
VCAN-204ENST00000502527 FSHBP01225 129 aa12.38□□□□□ -0.43
VCAN-204ENST00000502527 CD7P09564 240 aa12.38□□□□□ -0.43
VCAN-204ENST00000502527 Q6YL49 198 aa12.38□□□□□ -0.43
VCAN-204ENST00000502527 WFDC12Q8WWY7 111 aa12.38□□□□□ -0.43
VCAN-204ENST00000502527 CSTL1Q9H114 145 aa12.38□□□□□ -0.43
VCAN-204ENST00000502527 IGHV4OR15-8A0A075B7B6 117 aa12.38□□□□□ -0.43
VCAN-204ENST00000502527 A0A087WW49 117 aa12.38□□□□□ -0.43
VCAN-204ENST00000502527 A0A0J9YX75 114 aa12.38□□□□□ -0.43
VCAN-204ENST00000502527 SYNJ2BPP57105 145 aa12.38□□□□□ -0.43
VCAN-204ENST00000502527 LINC00315P59091 139 aa12.38□□□□□ -0.43
VCAN-204ENST00000502527 CSPG4Q6UVK1 2322 aa12.37□□□□□ -0.43
VCAN-204ENST00000502527 PRB1P04280 392 aa12.37□□□□□ -0.43
VCAN-204ENST00000502527 RPL32P62910 135 aaKnown RBP12.37□□□□□ -0.43
VCAN-204ENST00000502527 C2orf66Q6UXQ4 117 aa12.37□□□□□ -0.43
VCAN-204ENST00000502527 CHAC1Q9BUX1 264 aa12.37□□□□□ -0.43
VCAN-204ENST00000502527 TTTY13Q9BZ97 58 aa12.37□□□□□ -0.43
VCAN-204ENST00000502527 ACACBO00763 2458 aa12.36□□□□□ -0.43
VCAN-204ENST00000502527 TRBV25-1A0A075B6N4 114 aa12.36□□□□□ -0.43
VCAN-204ENST00000502527 NEXN-AS1Q8NBZ9 246 aa12.36□□□□□ -0.43
VCAN-204ENST00000502527 UBE2E2Q96LR5 201 aa12.36□□□□□ -0.43
VCAN-204ENST00000502527 CHTOPQ9Y3Y2 248 aaKnown RBP12.36□□□□□ -0.43
VCAN-204ENST00000502527 ZNF702PQ9H963 129 aa12.36□□□□□ -0.43
VCAN-204ENST00000502527 IGHV4-31P0DP07 118 aa12.35□□□□□ -0.43
VCAN-204ENST00000502527 UTP20O75691 2785 aaKnown RBP12.35□□□□□ -0.43
VCAN-204ENST00000502527 DUSP14O95147 198 aaKnown RBP12.34□□□□□ -0.43
VCAN-204ENST00000502527 GCSHP23434 173 aa12.34□□□□□ -0.43
VCAN-204ENST00000502527 IGHV3-16A0A0C4DH30 117 aa12.34□□□□□ -0.43
VCAN-204ENST00000502527 GAGE10A6NGK3 116 aa12.34□□□□□ -0.43
VCAN-204ENST00000502527 LINC01549A6NIU2 74 aa12.34□□□□□ -0.43
VCAN-204ENST00000502527 IGKV3-20P01619 116 aa12.34□□□□□ -0.43
VCAN-204ENST00000502527 HOXD3P31249 432 aaPredicted RBP12.34□□□□□ -0.43
VCAN-204ENST00000502527 CDKN1BP46527 198 aa12.34□□□□□ -0.43
VCAN-204ENST00000502527 SUMO4Q6EEV6 95 aa12.34□□□□□ -0.43
VCAN-204ENST00000502527 C9orf85Q96MD7 179 aa12.34□□□□□ -0.43
VCAN-204ENST00000502527 CBY1Q9Y3M2 126 aa12.34□□□□□ -0.43
VCAN-204ENST00000502527 H3BUT2 72 aa12.33□□□□□ -0.44
VCAN-204ENST00000502527 SMIM13P0DJ93 91 aa12.33□□□□□ -0.44
VCAN-204ENST00000502527 GTF2H5Q6ZYL4 71 aa12.33□□□□□ -0.44
VCAN-204ENST00000502527 RNF152Q8N8N0 203 aa12.33□□□□□ -0.44
VCAN-204ENST00000502527 SYT8Q8NBV8 401 aa12.33□□□□□ -0.44
VCAN-204ENST00000502527 RNASE8Q8TDE3 154 aaKnown RBP12.33□□□□□ -0.44
VCAN-204ENST00000502527 BAALCQ8WXS3 180 aa12.33□□□□□ -0.44
VCAN-204ENST00000502527 JPT2Q9H910 190 aa12.33□□□□□ -0.44
VCAN-204ENST00000502527 CRYBG3Q68DQ2 2970 aa12.33□□□□□ -0.44
VCAN-204ENST00000502527 TRAV12-2A0A075B6T6 113 aa12.33□□□□□ -0.44
VCAN-204ENST00000502527 A0A087WWL8 130 aa12.33□□□□□ -0.44
VCAN-204ENST00000502527 F5H697 171 aa12.33□□□□□ -0.44
VCAN-204ENST00000502527 HOXA3O43365 443 aaPredicted RBP12.33□□□□□ -0.44
VCAN-204ENST00000502527 VCYO14598 125 aa12.32□□□□□ -0.44
VCAN-204ENST00000502527 POLR2KP53803 58 aaKnown RBP12.32□□□□□ -0.44
VCAN-204ENST00000502527 MAPKAPK5-AS1Q8N8E1 139 aa12.32□□□□□ -0.44
VCAN-204ENST00000502527 RAB37Q96AX2 223 aa12.32□□□□□ -0.44
VCAN-204ENST00000502527 BEX4Q9NWD9 120 aaPredicted RBP12.32□□□□□ -0.44
VCAN-204ENST00000502527 CYSLTR1Q9Y271 337 aa12.32□□□□□ -0.44
VCAN-204ENST00000502527 IGHV1OR15-1A0A075B7D0 117 aa12.31□□□□□ -0.44
VCAN-204ENST00000502527 NEGR1Q7Z3B1 354 aa12.31□□□□□ -0.44
VCAN-204ENST00000502527 DUX5Q96PT3 197 aa12.31□□□□□ -0.44
VCAN-204ENST00000502527 TM2D2Q9BX73 214 aa12.31□□□□□ -0.44
VCAN-204ENST00000502527 USP9YO00507 2555 aaPredicted RBP12.31□□□□□ -0.44
VCAN-204ENST00000502527 ANKRD17O75179 2603 aaKnown RBP12.31□□□□□ -0.44
VCAN-204ENST00000502527 MUC4Q99102 2169 aa12.31□□□□□ -0.44
VCAN-204ENST00000502527 PRSS29PA6NIE9 313 aa12.31□□□□□ -0.44
VCAN-204ENST00000502527 FXYD2P54710 66 aa12.31□□□□□ -0.44
VCAN-204ENST00000502527 TAL2Q16559 108 aa12.31□□□□□ -0.44
VCAN-204ENST00000502527 FOXI2Q6ZQN5 318 aa12.31□□□□□ -0.44
VCAN-204ENST00000502527 Q8N1Y9 231 aa12.31□□□□□ -0.44
VCAN-204ENST00000502527 BBC3Q96PG8 261 aaPredicted RBP12.31□□□□□ -0.44
VCAN-204ENST00000502527 JMJD8Q96S16 334 aa12.31□□□□□ -0.44
VCAN-204ENST00000502527 KIR2DL4Q99706 377 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms