RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 PGPA6NDG6 321 aa5.88□□□□□ -1.47
CCDC171-209ENST00000498725 NHLH2Q02577 135 aa5.88□□□□□ -1.47
CCDC171-209ENST00000498725 RAB32Q13637 225 aa5.88□□□□□ -1.47
CCDC171-209ENST00000498725 ATP6V1FQ16864 119 aa5.88□□□□□ -1.47
CCDC171-209ENST00000498725 TRIQKQ629K1 86 aa5.88□□□□□ -1.47
CCDC171-209ENST00000498725 NIT1Q86X76 327 aa5.88□□□□□ -1.47
CCDC171-209ENST00000498725 CYB561D1Q8N8Q1 229 aa5.88□□□□□ -1.47
CCDC171-209ENST00000498725 CMTM2Q8TAZ6 248 aa5.88□□□□□ -1.47
CCDC171-209ENST00000498725 CHAC2Q8WUX2 184 aa5.88□□□□□ -1.47
CCDC171-209ENST00000498725 DEDD2Q8WXF8 326 aa5.88□□□□□ -1.47
CCDC171-209ENST00000498725 C2orf50Q96LR7 162 aa5.88□□□□□ -1.47
CCDC171-209ENST00000498725 LYRM2Q9NU23 88 aaPredicted RBP5.88□□□□□ -1.47
CCDC171-209ENST00000498725 C11orf21Q9P2W6 132 aa5.88□□□□□ -1.47
CCDC171-209ENST00000498725 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.88□□□□□ -1.47
CCDC171-209ENST00000498725 A0A087WX48 190 aa5.87□□□□□ -1.47
CCDC171-209ENST00000498725 NAP1L6A6NFF2 107 aa5.87□□□□□ -1.47
CCDC171-209ENST00000498725 PANO1I0J062 215 aa5.87□□□□□ -1.47
CCDC171-209ENST00000498725 CIDEAO60543 219 aa5.87□□□□□ -1.47
CCDC171-209ENST00000498725 HLA-DQA1P01909 254 aa5.87□□□□□ -1.47
CCDC171-209ENST00000498725 BTCP35070 178 aa5.87□□□□□ -1.47
CCDC171-209ENST00000498725 GNG5P63218 68 aa5.87□□□□□ -1.47
CCDC171-209ENST00000498725 LGALSLQ3ZCW2 172 aaPredicted RBP5.87□□□□□ -1.47
CCDC171-209ENST00000498725 Q6ZRU5 148 aa5.87□□□□□ -1.47
CCDC171-209ENST00000498725 C14orf178Q8N769 122 aaPredicted RBP5.87□□□□□ -1.47
CCDC171-209ENST00000498725 SEC22CQ9BRL7 303 aa5.87□□□□□ -1.47
CCDC171-209ENST00000498725 SH3BGRL3Q9H299 93 aa5.87□□□□□ -1.47
CCDC171-209ENST00000498725 JPT2Q9H910 190 aa5.87□□□□□ -1.47
CCDC171-209ENST00000498725 A0A087WWC5 75 aa5.86□□□□□ -1.47
CCDC171-209ENST00000498725 USP17L23D6RBM5 183 aa5.86□□□□□ -1.47
CCDC171-209ENST00000498725 ZNF80P51504 273 aaPredicted RBP5.86□□□□□ -1.47
CCDC171-209ENST00000498725 C14orf177Q52M58 125 aa5.86□□□□□ -1.47
CCDC171-209ENST00000498725 LCE1DQ5T752 114 aa5.86□□□□□ -1.47
CCDC171-209ENST00000498725 KCNIP4Q6PIL6 250 aa5.86□□□□□ -1.47
CCDC171-209ENST00000498725 OR5C1Q8NGR4 320 aa5.86□□□□□ -1.47
CCDC171-209ENST00000498725 DPH3Q96FX2 82 aa5.86□□□□□ -1.47
CCDC171-209ENST00000498725 C9orf85Q96MD7 179 aa5.86□□□□□ -1.47
CCDC171-209ENST00000498725 C1orf43Q9BWL3 253 aa5.86□□□□□ -1.47
CCDC171-209ENST00000498725 PARLQ9H300 379 aa5.86□□□□□ -1.47
CCDC171-209ENST00000498725 LRP2P98164 4655 aa5.86□□□□□ -1.47
CCDC171-209ENST00000498725 TRAV6A0A075B6T7 132 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 A0A0D9SG52 128 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 CCDC160A6NGH7 325 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 CENPXA8MT69 81 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 TMEM262E9PQX1 116 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 GAS8-AS1O95177 125 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 PRSS1P07477 247 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 SEC11BP0C7V7 166 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 LINC00694P0DN24 101 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 KHDC3LQ587J8 217 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 FFAR4Q5NUL3 377 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 FAM74A1Q5RGS3 127 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 TMED6Q8WW62 240 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 ZC2HC1AQ96GY0 325 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 OTORQ9NRC9 128 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 MBD2Q9UBB5 411 aa5.85□□□□□ -1.47
CCDC171-209ENST00000498725 GCGP01275 180 aa5.84□□□□□ -1.47
CCDC171-209ENST00000498725 CRPP02741 224 aa5.84□□□□□ -1.47
CCDC171-209ENST00000498725 RNASE3P12724 160 aaKnown RBP5.84□□□□□ -1.47
CCDC171-209ENST00000498725 ELOBQ15370 118 aa5.84□□□□□ -1.47
CCDC171-209ENST00000498725 C15orf54Q8N8G6 183 aa5.84□□□□□ -1.47
CCDC171-209ENST00000498725 OR2G3Q8NGZ4 309 aa5.84□□□□□ -1.47
CCDC171-209ENST00000498725 NDFIP1Q9BT67 221 aa5.84□□□□□ -1.47
CCDC171-209ENST00000498725 MRPL18Q9H0U6 180 aaKnown RBP5.84□□□□□ -1.47
CCDC171-209ENST00000498725 C17orf112F2Z3M2 114 aa5.83□□□□□ -1.48
CCDC171-209ENST00000498725 TAAR5O14804 337 aa5.83□□□□□ -1.48
CCDC171-209ENST00000498725 HMGB3O15347 200 aaKnown RBP5.83□□□□□ -1.48
CCDC171-209ENST00000498725 S100A4P26447 101 aaKnown RBP5.83□□□□□ -1.48
CCDC171-209ENST00000498725 FGF8P55075 233 aaPredicted RBP5.83□□□□□ -1.48
CCDC171-209ENST00000498725 Q0VG73 95 aa5.83□□□□□ -1.48
CCDC171-209ENST00000498725 FAM74A4Q5TZK3 123 aa5.83□□□□□ -1.48
CCDC171-209ENST00000498725 CLPSL2Q6UWE3 100 aa5.83□□□□□ -1.48
CCDC171-209ENST00000498725 ENHOQ6UWT2 76 aa5.83□□□□□ -1.48
CCDC171-209ENST00000498725 C9orf163Q8N9P6 203 aa5.83□□□□□ -1.48
CCDC171-209ENST00000498725 WDR61Q9GZS3 305 aaKnown RBP5.83□□□□□ -1.48
CCDC171-209ENST00000498725 KCNIP2Q9NS61 270 aa5.83□□□□□ -1.48
CCDC171-209ENST00000498725 A8MWV9 139 aa5.82□□□□□ -1.48
CCDC171-209ENST00000498725 ANGP03950 147 aaKnown RBP5.82□□□□□ -1.48
CCDC171-209ENST00000498725 TAS2R45P59539 299 aa5.82□□□□□ -1.48
CCDC171-209ENST00000498725 LRRC37A5PQ49AS3 106 aa5.82□□□□□ -1.48
CCDC171-209ENST00000498725 ZFP2Q6ZN57 461 aa5.82□□□□□ -1.48
CCDC171-209ENST00000498725 PRNTQ86SH4 94 aa5.82□□□□□ -1.48
CCDC171-209ENST00000498725 LINC00479Q96M42 142 aa5.82□□□□□ -1.48
CCDC171-209ENST00000498725 OR5AC2Q9NZP5 309 aa5.82□□□□□ -1.48
CCDC171-209ENST00000498725 TNXBP22105 4242 aa5.82□□□□□ -1.48
CCDC171-209ENST00000498725 A0A087WWL8 130 aa5.81□□□□□ -1.48
CCDC171-209ENST00000498725 SIX6O95475 246 aa5.81□□□□□ -1.48
CCDC171-209ENST00000498725 TCRBP04435 133 aa5.81□□□□□ -1.48
CCDC171-209ENST00000498725 CHTF8P0CG12 524 aa5.81□□□□□ -1.48
CCDC171-209ENST00000498725 IL15RAQ13261 267 aa5.81□□□□□ -1.48
CCDC171-209ENST00000498725 ZFP69Q49AA0 526 aa5.81□□□□□ -1.48
CCDC171-209ENST00000498725 SMUG1Q53HV7 270 aa5.81□□□□□ -1.48
CCDC171-209ENST00000498725 ATRAIDQ6UW56 229 aa5.81□□□□□ -1.48
CCDC171-209ENST00000498725 HSD17B11Q8NBQ5 300 aa5.81□□□□□ -1.48
CCDC171-209ENST00000498725 OR10G9Q8NGN4 311 aa5.81□□□□□ -1.48
CCDC171-209ENST00000498725 PTH2Q96A98 100 aa5.81□□□□□ -1.48
CCDC171-209ENST00000498725 SDHCQ99643 169 aaPredicted RBP5.81□□□□□ -1.48
CCDC171-209ENST00000498725 NUDT15Q9NV35 164 aa5.81□□□□□ -1.48
CCDC171-209ENST00000498725 H3BVH4 76 aa5.8□□□□□ -1.48
CCDC171-209ENST00000498725 PHOX2AO14813 284 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms