RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 ZFP30Q9Y2G7 519 aa12.8□□□□□ -0.36
ECM1-207ENST00000498579 RNASE3P12724 160 aaKnown RBP12.79□□□□□ -0.36
ECM1-207ENST00000498579 ASIPP42127 132 aa12.79□□□□□ -0.36
ECM1-207ENST00000498579 FHITP49789 147 aa12.79□□□□□ -0.36
ECM1-207ENST00000498579 ZNF506Q5JVG8 444 aa12.79□□□□□ -0.36
ECM1-207ENST00000498579 WFDC10BQ8IUB3 73 aa12.79□□□□□ -0.36
ECM1-207ENST00000498579 SLC25A29Q8N8R3 303 aa12.79□□□□□ -0.36
ECM1-207ENST00000498579 LINC00479Q96M42 142 aa12.79□□□□□ -0.36
ECM1-207ENST00000498579 CYTL1Q9NRR1 136 aa12.79□□□□□ -0.36
ECM1-207ENST00000498579 MSRB1Q9NZV6 116 aa12.79□□□□□ -0.36
ECM1-207ENST00000498579 LOC100131303A0A0U1RQF7 123 aa12.78□□□□□ -0.36
ECM1-207ENST00000498579 A8MWV9 139 aa12.78□□□□□ -0.36
ECM1-207ENST00000498579 CRYGDP07320 174 aa12.78□□□□□ -0.36
ECM1-207ENST00000498579 UBE2G1P62253 170 aa12.78□□□□□ -0.36
ECM1-207ENST00000498579 FMC1Q96HJ9 113 aa12.78□□□□□ -0.36
ECM1-207ENST00000498579 PGPEP1Q9NXJ5 209 aa12.78□□□□□ -0.36
ECM1-207ENST00000498579 TRAV8-6A0A0B4J262 113 aa12.77□□□□□ -0.37
ECM1-207ENST00000498579 IGHV3-38A0A0C4DH36 116 aa12.77□□□□□ -0.37
ECM1-207ENST00000498579 PGPEP1LA6NFU8 196 aa12.77□□□□□ -0.37
ECM1-207ENST00000498579 KRTAP10-2P60368 255 aa12.77□□□□□ -0.37
ECM1-207ENST00000498579 CDPF1Q6NVV7 123 aa12.77□□□□□ -0.37
ECM1-207ENST00000498579 DPPA3Q6W0C5 159 aa12.77□□□□□ -0.37
ECM1-207ENST00000498579 ZFP2Q6ZN57 461 aa12.77□□□□□ -0.37
ECM1-207ENST00000498579 PCLOQ9Y6V0 5065 aa12.77□□□□□ -0.37
ECM1-207ENST00000498579 IGKV3D-20A0A0C4DH25 116 aa12.76□□□□□ -0.37
ECM1-207ENST00000498579 B4DEV8 164 aa12.76□□□□□ -0.37
ECM1-207ENST00000498579 UMAD1C9J7I0 102 aa12.76□□□□□ -0.37
ECM1-207ENST00000498579 COX8CQ7Z4L0 72 aa12.76□□□□□ -0.37
ECM1-207ENST00000498579 KCNRGQ8N5I3 272 aa12.76□□□□□ -0.37
ECM1-207ENST00000498579 IL36BQ9NZH7 164 aa12.76□□□□□ -0.37
ECM1-207ENST00000498579 IGHV3-73A0A0B4J1V6 119 aa12.75□□□□□ -0.37
ECM1-207ENST00000498579 A0A0D9SG52 128 aa12.75□□□□□ -0.37
ECM1-207ENST00000498579 TRBV6-1A0A0K0K1D8 114 aa12.75□□□□□ -0.37
ECM1-207ENST00000498579 HMSDA8MTL9 139 aa12.75□□□□□ -0.37
ECM1-207ENST00000498579 SEC11BP0C7V7 166 aa12.75□□□□□ -0.37
ECM1-207ENST00000498579 EIF5AP63241 154 aaKnown RBP12.75□□□□□ -0.37
ECM1-207ENST00000498579 LGALSLQ3ZCW2 172 aaPredicted RBP12.75□□□□□ -0.37
ECM1-207ENST00000498579 LINC01556Q5JQF7 62 aa12.75□□□□□ -0.37
ECM1-207ENST00000498579 FAM162BQ5T6X4 162 aa12.75□□□□□ -0.37
ECM1-207ENST00000498579 CST9LP1Q5W188 147 aa12.75□□□□□ -0.37
ECM1-207ENST00000498579 SYT8Q8NBV8 401 aa12.75□□□□□ -0.37
ECM1-207ENST00000498579 KANTRA0A1W2PQU2 76 aa12.74□□□□□ -0.37
ECM1-207ENST00000498579 OR10J3Q5JRS4 329 aa12.74□□□□□ -0.37
ECM1-207ENST00000498579 PARLQ9H300 379 aa12.74□□□□□ -0.37
ECM1-207ENST00000498579 SMLR1H3BR10 107 aa12.73□□□□□ -0.37
ECM1-207ENST00000498579 RHODO00212 210 aa12.73□□□□□ -0.37
ECM1-207ENST00000498579 AKR1C3P42330 323 aa12.73□□□□□ -0.37
ECM1-207ENST00000498579 DNLZQ5SXM8 178 aa12.73□□□□□ -0.37
ECM1-207ENST00000498579 LELP1Q5T871 98 aa12.73□□□□□ -0.37
ECM1-207ENST00000498579 ATP6V0E2Q8NHE4 81 aa12.73□□□□□ -0.37
ECM1-207ENST00000498579 ZC2HC1AQ96GY0 325 aa12.73□□□□□ -0.37
ECM1-207ENST00000498579 GTSF1LQ9H1H1 148 aa12.73□□□□□ -0.37
ECM1-207ENST00000498579 TNFRSF18Q9Y5U5 241 aa12.73□□□□□ -0.37
ECM1-207ENST00000498579 HSPG2P98160 4391 aa12.72□□□□□ -0.37
ECM1-207ENST00000498579 LTAP01374 205 aa12.72□□□□□ -0.37
ECM1-207ENST00000498579 S100A9P06702 114 aaKnown RBP12.72□□□□□ -0.37
ECM1-207ENST00000498579 MAPKAPK5-AS1Q8N8E1 139 aa12.72□□□□□ -0.37
ECM1-207ENST00000498579 ZNF471Q9BX82 626 aaPredicted RBP12.72□□□□□ -0.37
ECM1-207ENST00000498579 DNAH5Q8TE73 4624 aa12.72□□□□□ -0.37
ECM1-207ENST00000498579 A0A087WTM6 91 aa12.71□□□□□ -0.37
ECM1-207ENST00000498579 KRBOX1C9JBD0 128 aa12.71□□□□□ -0.37
ECM1-207ENST00000498579 H3BVH4 76 aa12.71□□□□□ -0.37
ECM1-207ENST00000498579 BCL2L11O43521 198 aa12.71□□□□□ -0.37
ECM1-207ENST00000498579 SH2D1AO60880 128 aa12.71□□□□□ -0.37
ECM1-207ENST00000498579 PFDN1O60925 122 aa12.71□□□□□ -0.37
ECM1-207ENST00000498579 OR11H4Q8NGC9 324 aa12.71□□□□□ -0.37
ECM1-207ENST00000498579 SFT2D1Q8WV19 159 aa12.71□□□□□ -0.37
ECM1-207ENST00000498579 M0R036 132 aa12.7□□□□□ -0.38
ECM1-207ENST00000498579 ZNF674Q2M3X9 581 aa12.7□□□□□ -0.38
ECM1-207ENST00000498579 LINC01559Q495D7 138 aa12.7□□□□□ -0.38
ECM1-207ENST00000498579 FAM213BQ8TBF2 198 aa12.7□□□□□ -0.38
ECM1-207ENST00000498579 MBD3L1Q8WWY6 194 aa12.7□□□□□ -0.38
ECM1-207ENST00000498579 PHLDA3Q9Y5J5 127 aa12.7□□□□□ -0.38
ECM1-207ENST00000498579 PSCAO43653 123 aa12.69□□□□□ -0.38
ECM1-207ENST00000498579 PAGE4O60829 102 aa12.69□□□□□ -0.38
ECM1-207ENST00000498579 ARMS2P0C7Q2 107 aa12.69□□□□□ -0.38
ECM1-207ENST00000498579 TPT1P13693 172 aaKnown RBP12.69□□□□□ -0.38
ECM1-207ENST00000498579 CRIP1P50238 77 aa12.69□□□□□ -0.38
ECM1-207ENST00000498579 IBA57-AS1B1ANH7 110 aa12.68□□□□□ -0.38
ECM1-207ENST00000498579 DMRTA1Q5VZB9 504 aa12.68□□□□□ -0.38
ECM1-207ENST00000498579 A0A087WWC5 75 aa12.67□□□□□ -0.38
ECM1-207ENST00000498579 LAGE3Q14657 143 aa12.67□□□□□ -0.38
ECM1-207ENST00000498579 UFSP1Q6NVU6 142 aa12.67□□□□□ -0.38
ECM1-207ENST00000498579 ZFP82Q8N141 532 aa12.67□□□□□ -0.38
ECM1-207ENST00000498579 Q8N1X5 172 aa12.67□□□□□ -0.38
ECM1-207ENST00000498579 SCRT2Q9NQ03 307 aa12.67□□□□□ -0.38
ECM1-207ENST00000498579 GRIFINA4D1Z8 144 aa12.66□□□□□ -0.38
ECM1-207ENST00000498579 GAGE12JA6NER3 117 aa12.66□□□□□ -0.38
ECM1-207ENST00000498579 H2AFB1P0C5Y9 115 aa12.66□□□□□ -0.38
ECM1-207ENST00000498579 LINC00694P0DN24 101 aa12.66□□□□□ -0.38
ECM1-207ENST00000498579 GAGE1Q13065 139 aa12.66□□□□□ -0.38
ECM1-207ENST00000498579 GAGE4Q13068 117 aa12.66□□□□□ -0.38
ECM1-207ENST00000498579 GAGE5Q13069 117 aa12.66□□□□□ -0.38
ECM1-207ENST00000498579 GAGE13Q4V321 117 aa12.66□□□□□ -0.38
ECM1-207ENST00000498579 Q6ZSN1 163 aa12.65□□□□□ -0.38
ECM1-207ENST00000498579 SFRP2Q96HF1 295 aa12.65□□□□□ -0.38
ECM1-207ENST00000498579 APOBP04114 4563 aaKnown RBP12.65□□□□□ -0.38
ECM1-207ENST00000498579 TMSB15BA0A087X1C1 80 aa12.64□□□□□ -0.39
ECM1-207ENST00000498579 M0R381 172 aa12.64□□□□□ -0.39
ECM1-207ENST00000498579 IGHV3-30P01768 117 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms