RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 COX11Q9Y6N1 276 aa9.59□□□□□ -0.87
TRAF4-212ENST00000498540 IGKV2D-24A0A075B6R9 120 aa9.58□□□□□ -0.88
TRAF4-212ENST00000498540 IGLV2-8P01709 118 aa9.58□□□□□ -0.88
TRAF4-212ENST00000498540 HNRNPA3P51991 378 aaKnown RBP9.58□□□□□ -0.88
TRAF4-212ENST00000498540 ARL6IP6Q8N6S5 226 aa9.58□□□□□ -0.88
TRAF4-212ENST00000498540 PTH2Q96A98 100 aa9.58□□□□□ -0.88
TRAF4-212ENST00000498540 PARLQ9H300 379 aa9.58□□□□□ -0.88
TRAF4-212ENST00000498540 GCGP01275 180 aa9.57□□□□□ -0.88
TRAF4-212ENST00000498540 CYB561D1Q8N8Q1 229 aa9.57□□□□□ -0.88
TRAF4-212ENST00000498540 RMI2Q96E14 147 aa9.57□□□□□ -0.88
TRAF4-212ENST00000498540 NDFIP1Q9BT67 221 aa9.57□□□□□ -0.88
TRAF4-212ENST00000498540 SAMD10Q9BYL1 202 aa9.57□□□□□ -0.88
TRAF4-212ENST00000498540 FAM240BA0A1B0GVZ2 78 aa9.56□□□□□ -0.88
TRAF4-212ENST00000498540 TAAR5O14804 337 aa9.56□□□□□ -0.88
TRAF4-212ENST00000498540 HMGB3O15347 200 aaKnown RBP9.56□□□□□ -0.88
TRAF4-212ENST00000498540 ACOT6Q3I5F7 207 aaPredicted RBP9.56□□□□□ -0.88
TRAF4-212ENST00000498540 PQLC2Q6ZP29 291 aa9.56□□□□□ -0.88
TRAF4-212ENST00000498540 C14orf178Q8N769 122 aaPredicted RBP9.56□□□□□ -0.88
TRAF4-212ENST00000498540 OR2T35Q8NGX2 323 aa9.56□□□□□ -0.88
TRAF4-212ENST00000498540 SMIM3Q9BZL3 60 aa9.56□□□□□ -0.88
TRAF4-212ENST00000498540 SH3BGRL3Q9H299 93 aa9.56□□□□□ -0.88
TRAF4-212ENST00000498540 KLK12Q9UKR0 248 aa9.56□□□□□ -0.88
TRAF4-212ENST00000498540 HSPB11Q9Y547 144 aa9.56□□□□□ -0.88
TRAF4-212ENST00000498540 A0A087WWC5 75 aa9.55□□□□□ -0.88
TRAF4-212ENST00000498540 RPL37AP61513 92 aaKnown RBP9.55□□□□□ -0.88
TRAF4-212ENST00000498540 ZFP2Q6ZN57 461 aa9.55□□□□□ -0.88
TRAF4-212ENST00000498540 NIT1Q86X76 327 aa9.55□□□□□ -0.88
TRAF4-212ENST00000498540 SCGB1C1Q8TD33 95 aa9.55□□□□□ -0.88
TRAF4-212ENST00000498540 LINC00479Q96M42 142 aa9.55□□□□□ -0.88
TRAF4-212ENST00000498540 JPT2Q9H910 190 aa9.55□□□□□ -0.88
TRAF4-212ENST00000498540 URGCP-MRPS24S4R325 110 aa9.55□□□□□ -0.88
TRAF4-212ENST00000498540 IGLV2-11P01706 119 aa9.54□□□□□ -0.88
TRAF4-212ENST00000498540 TCRAP04437 139 aa9.54□□□□□ -0.88
TRAF4-212ENST00000498540 RAB2AP61019 212 aa9.54□□□□□ -0.88
TRAF4-212ENST00000498540 UFSP1Q6NVU6 142 aa9.54□□□□□ -0.88
TRAF4-212ENST00000498540 DAZAP1Q96EP5 407 aaKnown RBP9.54□□□□□ -0.88
TRAF4-212ENST00000498540 PSG8Q9UQ74 426 aa9.54□□□□□ -0.88
TRAF4-212ENST00000498540 A0A1W2PPV4 95 aa9.53□□□□□ -0.88
TRAF4-212ENST00000498540 A8MWV9 139 aa9.53□□□□□ -0.88
TRAF4-212ENST00000498540 LGALSLQ3ZCW2 172 aaPredicted RBP9.53□□□□□ -0.88
TRAF4-212ENST00000498540 PPP1R1CQ8WVI7 109 aa9.53□□□□□ -0.88
TRAF4-212ENST00000498540 UBE2WQ96B02 151 aa9.53□□□□□ -0.88
TRAF4-212ENST00000498540 SERTM2A0A1B0GWG4 89 aa9.52□□□□□ -0.89
TRAF4-212ENST00000498540 ARL14EPLP0DKL9 152 aa9.52□□□□□ -0.89
TRAF4-212ENST00000498540 FGF8P55075 233 aaPredicted RBP9.52□□□□□ -0.89
TRAF4-212ENST00000498540 H2BFSP57053 126 aa9.52□□□□□ -0.89
TRAF4-212ENST00000498540 ZFP69Q49AA0 526 aa9.52□□□□□ -0.89
TRAF4-212ENST00000498540 SMUG1Q53HV7 270 aa9.52□□□□□ -0.89
TRAF4-212ENST00000498540 ATRAIDQ6UW56 229 aa9.52□□□□□ -0.89
TRAF4-212ENST00000498540 C5orf17Q8NAS9 161 aa9.52□□□□□ -0.89
TRAF4-212ENST00000498540 CCDC32Q9BV29 185 aa9.52□□□□□ -0.89
TRAF4-212ENST00000498540 WFDC1Q9HC57 220 aa9.52□□□□□ -0.89
TRAF4-212ENST00000498540 IGKV3D-20A0A0C4DH25 116 aa9.51□□□□□ -0.89
TRAF4-212ENST00000498540 SEC11BP0C7V7 166 aa9.51□□□□□ -0.89
TRAF4-212ENST00000498540 MT1HL1P0DM35 61 aa9.51□□□□□ -0.89
TRAF4-212ENST00000498540 CYCSP99999 105 aaKnown RBP9.51□□□□□ -0.89
TRAF4-212ENST00000498540 FLI1Q01543 452 aaPredicted RBP9.51□□□□□ -0.89
TRAF4-212ENST00000498540 PIK3CD-AS1Q5SR53 167 aa9.51□□□□□ -0.89
TRAF4-212ENST00000498540 PRNTQ86SH4 94 aa9.51□□□□□ -0.89
TRAF4-212ENST00000498540 K7EQM0 130 aa9.5□□□□□ -0.89
TRAF4-212ENST00000498540 S100A4P26447 101 aaKnown RBP9.5□□□□□ -0.89
TRAF4-212ENST00000498540 RPL12P30050 165 aaKnown RBP9.5□□□□□ -0.89
TRAF4-212ENST00000498540 MZT2BQ6NZ67 158 aa9.5□□□□□ -0.89
TRAF4-212ENST00000498540 OR10G9Q8NGN4 311 aa9.5□□□□□ -0.89
TRAF4-212ENST00000498540 OR10G7Q8NGN6 311 aa9.5□□□□□ -0.89
TRAF4-212ENST00000498540 A0A087WX48 190 aa9.49□□□□□ -0.89
TRAF4-212ENST00000498540 MPC2O95563 127 aa9.49□□□□□ -0.89
TRAF4-212ENST00000498540 ASIPP42127 132 aa9.49□□□□□ -0.89
TRAF4-212ENST00000498540 DMRTA1Q5VZB9 504 aa9.49□□□□□ -0.89
TRAF4-212ENST00000498540 H3BVH4 76 aa9.48□□□□□ -0.89
TRAF4-212ENST00000498540 STAG3L2P0CL84 134 aa9.48□□□□□ -0.89
TRAF4-212ENST00000498540 STAG3L3P0CL85 134 aa9.48□□□□□ -0.89
TRAF4-212ENST00000498540 CDC34P49427 236 aaPredicted RBP9.48□□□□□ -0.89
TRAF4-212ENST00000498540 C14orf177Q52M58 125 aa9.48□□□□□ -0.89
TRAF4-212ENST00000498540 FAM74A4Q5TZK3 123 aa9.48□□□□□ -0.89
TRAF4-212ENST00000498540 SUN5Q8TC36 379 aa9.48□□□□□ -0.89
TRAF4-212ENST00000498540 CHCHD7Q9BUK0 85 aa9.48□□□□□ -0.89
TRAF4-212ENST00000498540 IL36BQ9NZH7 164 aa9.48□□□□□ -0.89
TRAF4-212ENST00000498540 EPDR1Q9UM22 224 aa9.48□□□□□ -0.89
TRAF4-212ENST00000498540 RHODO00212 210 aa9.47□□□□□ -0.89
TRAF4-212ENST00000498540 GCHFRP30047 84 aa9.47□□□□□ -0.89
TRAF4-212ENST00000498540 SUMO1P63165 101 aaKnown RBP9.47□□□□□ -0.89
TRAF4-212ENST00000498540 ELOBQ15370 118 aa9.47□□□□□ -0.89
TRAF4-212ENST00000498540 ENHOQ6UWT2 76 aa9.47□□□□□ -0.89
TRAF4-212ENST00000498540 OR2G3Q8NGZ4 309 aa9.47□□□□□ -0.89
TRAF4-212ENST00000498540 ENKURQ8TC29 256 aa9.47□□□□□ -0.89
TRAF4-212ENST00000498540 C1orf43Q9BWL3 253 aa9.47□□□□□ -0.89
TRAF4-212ENST00000498540 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.47□□□□□ -0.89
TRAF4-212ENST00000498540 A0A087WWL8 130 aa9.46□□□□□ -0.9
TRAF4-212ENST00000498540 TRAV34A0A0B4J273 112 aa9.46□□□□□ -0.9
TRAF4-212ENST00000498540 USP17L23D6RBM5 183 aa9.46□□□□□ -0.9
TRAF4-212ENST00000498540 PANO1I0J062 215 aa9.46□□□□□ -0.9
TRAF4-212ENST00000498540 PET100P0DJ07 73 aa9.46□□□□□ -0.9
TRAF4-212ENST00000498540 Q0VG73 95 aa9.46□□□□□ -0.9
TRAF4-212ENST00000498540 SAPCD1Q5SSQ6 148 aa9.46□□□□□ -0.9
TRAF4-212ENST00000498540 B4DEV8 164 aa9.45□□□□□ -0.9
TRAF4-212ENST00000498540 KCNIP4Q6PIL6 250 aa9.45□□□□□ -0.9
TRAF4-212ENST00000498540 RAB24Q969Q5 203 aa9.45□□□□□ -0.9
TRAF4-212ENST00000498540 ARL2-SNX15V9GYD0 113 aa9.45□□□□□ -0.9
TRAF4-212ENST00000498540 FABP5P3A8MUU1 101 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms