RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 FGF8P55075 233 aaPredicted RBP10.71□□□□□ -0.69
MUC1-220ENST00000498431 Q9HAA7 133 aa10.71□□□□□ -0.69
MUC1-220ENST00000498431 TMEM167BQ9NRX6 74 aa10.71□□□□□ -0.69
MUC1-220ENST00000498431 TRAV4A0A0B4J268 109 aa10.7□□□□□ -0.7
MUC1-220ENST00000498431 TRBV7-9A0A0J9YWB2 115 aa10.7□□□□□ -0.7
MUC1-220ENST00000498431 KRTAP29-1A8MX34 341 aaPredicted RBP10.7□□□□□ -0.7
MUC1-220ENST00000498431 IBA57-AS1B1ANH7 110 aa10.7□□□□□ -0.7
MUC1-220ENST00000498431 TEX46H3BTG2 121 aa10.7□□□□□ -0.7
MUC1-220ENST00000498431 TEX261Q6UWH6 196 aa10.7□□□□□ -0.7
MUC1-220ENST00000498431 SUN5Q8TC36 379 aa10.7□□□□□ -0.7
MUC1-220ENST00000498431 SPXQ9BT56 116 aa10.7□□□□□ -0.7
MUC1-220ENST00000498431 TRAV1-1A0A0B4J248 108 aa10.69□□□□□ -0.7
MUC1-220ENST00000498431 IGHV3-16A0A0C4DH30 117 aa10.69□□□□□ -0.7
MUC1-220ENST00000498431 IFNA7P01567 189 aa10.69□□□□□ -0.7
MUC1-220ENST00000498431 BLOC1S1P78537 153 aa10.69□□□□□ -0.7
MUC1-220ENST00000498431 WFDC2Q14508 124 aa10.69□□□□□ -0.7
MUC1-220ENST00000498431 LINC01556Q5JQF7 62 aa10.69□□□□□ -0.7
MUC1-220ENST00000498431 Q6AWC8 147 aa10.69□□□□□ -0.7
MUC1-220ENST00000498431 NHLRC2Q8NBF2 726 aa10.69□□□□□ -0.7
MUC1-220ENST00000498431 TIRAPP58753 221 aa10.68□□□□□ -0.7
MUC1-220ENST00000498431 RANP62826 216 aaKnown RBP10.68□□□□□ -0.7
MUC1-220ENST00000498431 LINC00528Q8N1L1 170 aa10.68□□□□□ -0.7
MUC1-220ENST00000498431 OR4C5Q8NGB2 326 aa10.68□□□□□ -0.7
MUC1-220ENST00000498431 TRGV11A0A075B6L2 103 aa10.67□□□□□ -0.7
MUC1-220ENST00000498431 GNRH2O43555 120 aa10.67□□□□□ -0.7
MUC1-220ENST00000498431 PLA2G1BP04054 148 aaKnown RBP10.67□□□□□ -0.7
MUC1-220ENST00000498431 GATA1P15976 413 aaPredicted RBP10.67□□□□□ -0.7
MUC1-220ENST00000498431 PPT1P50897 306 aa10.67□□□□□ -0.7
MUC1-220ENST00000498431 FAM159AQ6UWV7 190 aa10.67□□□□□ -0.7
MUC1-220ENST00000498431 Q6ZSA8 131 aa10.67□□□□□ -0.7
MUC1-220ENST00000498431 OTORQ9NRC9 128 aa10.67□□□□□ -0.7
MUC1-220ENST00000498431 NAGKQ9UJ70 344 aa10.67□□□□□ -0.7
MUC1-220ENST00000498431 A0A1B0GV50 99 aa10.66□□□□□ -0.7
MUC1-220ENST00000498431 RBAKDNA6NC62 111 aa10.66□□□□□ -0.7
MUC1-220ENST00000498431 PGPA6NDG6 321 aa10.66□□□□□ -0.7
MUC1-220ENST00000498431 IGHV3-30P01768 117 aa10.66□□□□□ -0.7
MUC1-220ENST00000498431 IGHV3-33P01772 117 aa10.66□□□□□ -0.7
MUC1-220ENST00000498431 IGHV3-30-3P0DP02 117 aa10.66□□□□□ -0.7
MUC1-220ENST00000498431 IGHV3-30-5P0DP03 117 aa10.66□□□□□ -0.7
MUC1-220ENST00000498431 A0A1W2PRE2 83 aa10.65□□□□□ -0.7
MUC1-220ENST00000498431 M0R2P5 195 aa10.65□□□□□ -0.7
MUC1-220ENST00000498431 CSN1S1P47710 185 aa10.65□□□□□ -0.7
MUC1-220ENST00000498431 TDRG1Q3Y452 100 aa10.65□□□□□ -0.7
MUC1-220ENST00000498431 OR10J3Q5JRS4 329 aa10.65□□□□□ -0.7
MUC1-220ENST00000498431 SH2D6Q7Z4S9 175 aa10.65□□□□□ -0.7
MUC1-220ENST00000498431 Q8N3U1 123 aa10.65□□□□□ -0.7
MUC1-220ENST00000498431 CMTM2Q8TAZ6 248 aa10.65□□□□□ -0.7
MUC1-220ENST00000498431 UBE2G2P60604 165 aa10.64□□□□□ -0.71
MUC1-220ENST00000498431 CCL20P78556 96 aa10.64□□□□□ -0.71
MUC1-220ENST00000498431 ARL6IP6Q8N6S5 226 aa10.64□□□□□ -0.71
MUC1-220ENST00000498431 NKX6-2Q9C056 277 aaPredicted RBP10.64□□□□□ -0.71
MUC1-220ENST00000498431 ARL2-SNX15V9GYD0 113 aa10.64□□□□□ -0.71
MUC1-220ENST00000498431 TRAV8-6A0A0B4J262 113 aa10.63□□□□□ -0.71
MUC1-220ENST00000498431 FAM74A7A6NL05 159 aa10.63□□□□□ -0.71
MUC1-220ENST00000498431 DIRC3C9JPN6 131 aa10.63□□□□□ -0.71
MUC1-220ENST00000498431 LECT2O14960 151 aa10.63□□□□□ -0.71
MUC1-220ENST00000498431 PAGE4O60829 102 aa10.63□□□□□ -0.71
MUC1-220ENST00000498431 TYMSP04818 313 aa10.63□□□□□ -0.71
MUC1-220ENST00000498431 SUMO1P63165 101 aaKnown RBP10.63□□□□□ -0.71
MUC1-220ENST00000498431 SLC25A29Q8N8R3 303 aa10.63□□□□□ -0.71
MUC1-220ENST00000498431 DEFB104AQ8WTQ1 72 aa10.63□□□□□ -0.71
MUC1-220ENST00000498431 GNG13Q9P2W3 67 aa10.63□□□□□ -0.71
MUC1-220ENST00000498431 LENEPQ9Y5L5 61 aa10.63□□□□□ -0.71
MUC1-220ENST00000498431 PKHD1L1Q86WI1 4243 aa10.62□□□□□ -0.71
MUC1-220ENST00000498431 IFNA1P01562 189 aa10.62□□□□□ -0.71
MUC1-220ENST00000498431 LINC01620Q4KN68 170 aa10.62□□□□□ -0.71
MUC1-220ENST00000498431 CST9LP1Q5W188 147 aa10.62□□□□□ -0.71
MUC1-220ENST00000498431 C5orf17Q8NAS9 161 aa10.62□□□□□ -0.71
MUC1-220ENST00000498431 LYPD6BQ8NI32 183 aa10.62□□□□□ -0.71
MUC1-220ENST00000498431 MANBALQ9NQG1 85 aa10.62□□□□□ -0.71
MUC1-220ENST00000498431 FBLL1A6NHQ2 334 aaKnown RBP10.61□□□□□ -0.71
MUC1-220ENST00000498431 GGTLC3B5MD39 225 aa10.61□□□□□ -0.71
MUC1-220ENST00000498431 F6UZH7 168 aa10.61□□□□□ -0.71
MUC1-220ENST00000498431 PFN1P07737 140 aaKnown RBP10.61□□□□□ -0.71
MUC1-220ENST00000498431 KRTAP10-4P60372 401 aaPredicted RBP10.61□□□□□ -0.71
MUC1-220ENST00000498431 IFITM2Q01629 132 aa10.61□□□□□ -0.71
MUC1-220ENST00000498431 TVP23CQ96ET8 276 aa10.61□□□□□ -0.71
MUC1-220ENST00000498431 RPH3ALQ9UNE2 315 aa10.61□□□□□ -0.71
MUC1-220ENST00000498431 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.6□□□□□ -0.71
MUC1-220ENST00000498431 IGHV3-73A0A0B4J1V6 119 aa10.6□□□□□ -0.71
MUC1-220ENST00000498431 TAGLN2P37802 199 aaKnown RBP10.6□□□□□ -0.71
MUC1-220ENST00000498431 RAB14P61106 215 aa10.6□□□□□ -0.71
MUC1-220ENST00000498431 LELP1Q5T871 98 aa10.6□□□□□ -0.71
MUC1-220ENST00000498431 SCXQ7RTU7 201 aa10.6□□□□□ -0.71
MUC1-220ENST00000498431 EPDR1Q9UM22 224 aa10.6□□□□□ -0.71
MUC1-220ENST00000498431 SERTM2A0A1B0GWG4 89 aa10.59□□□□□ -0.71
MUC1-220ENST00000498431 GNG5P63218 68 aa10.59□□□□□ -0.71
MUC1-220ENST00000498431 LAGE3Q14657 143 aa10.59□□□□□ -0.71
MUC1-220ENST00000498431 SERTAD4-AS1Q5TG53 156 aa10.59□□□□□ -0.71
MUC1-220ENST00000498431 CFAP126Q5VTH2 177 aa10.59□□□□□ -0.71
MUC1-220ENST00000498431 TCEAL7Q9BRU2 100 aa10.59□□□□□ -0.71
MUC1-220ENST00000498431 TRAV8-1A0A0A6YYK1 113 aa10.58□□□□□ -0.72
MUC1-220ENST00000498431 TRAV21A0A0B4J279 112 aa10.58□□□□□ -0.72
MUC1-220ENST00000498431 K7EQM0 130 aa10.58□□□□□ -0.72
MUC1-220ENST00000498431 TCRAP04437 139 aa10.58□□□□□ -0.72
MUC1-220ENST00000498431 BCL2P10415 239 aa10.58□□□□□ -0.72
MUC1-220ENST00000498431 RHOHQ15669 191 aa10.58□□□□□ -0.72
MUC1-220ENST00000498431 GOLT1AQ6ZVE7 132 aa10.58□□□□□ -0.72
MUC1-220ENST00000498431 HIST1H2BAQ96A08 127 aa10.58□□□□□ -0.72
MUC1-220ENST00000498431 PRADC1Q9BSG0 188 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms