RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 GAGE13Q4V321 117 aa14.95□□□□□ -0.02
NKX2-1-202ENST00000498187 GPHB5Q86YW7 130 aa14.95□□□□□ -0.02
NKX2-1-202ENST00000498187 LINC00477Q96M19 166 aa14.94□□□□□ -0.02
NKX2-1-202ENST00000498187 KLK15Q9H2R5 256 aa14.94□□□□□ -0.02
NKX2-1-202ENST00000498187 DPH3P1Q9H4G8 78 aa14.94□□□□□ -0.02
NKX2-1-202ENST00000498187 ZFHX3Q15911 3703 aa14.94□□□□□ -0.02
NKX2-1-202ENST00000498187 GAGE12HA6NDE8 117 aa14.93□□□□□ -0.02
NKX2-1-202ENST00000498187 AZU1P20160 251 aa14.93□□□□□ -0.02
NKX2-1-202ENST00000498187 RASL10AQ92737 203 aa14.93□□□□□ -0.02
NKX2-1-202ENST00000498187 TRAV21A0A0B4J279 112 aa14.93□□□□□ -0.02
NKX2-1-202ENST00000498187 M0R381 172 aa14.93□□□□□ -0.02
NKX2-1-202ENST00000498187 S100A4P26447 101 aaKnown RBP14.93□□□□□ -0.02
NKX2-1-202ENST00000498187 ZFAND2AQ8N6M9 145 aa14.93□□□□□ -0.02
NKX2-1-202ENST00000498187 GTSF1LQ9H1H1 148 aa14.93□□□□□ -0.02
NKX2-1-202ENST00000498187 TSSC4Q9Y5U2 329 aaPredicted RBP14.93□□□□□ -0.02
NKX2-1-202ENST00000498187 NDUFA4O00483 81 aa14.92□□□□□ -0.02
NKX2-1-202ENST00000498187 HOXA3O43365 443 aaPredicted RBP14.92□□□□□ -0.02
NKX2-1-202ENST00000498187 DEFB1P60022 68 aa14.92□□□□□ -0.02
NKX2-1-202ENST00000498187 ETDBQ3ZM63 59 aa14.92□□□□□ -0.02
NKX2-1-202ENST00000498187 AMTNQ6UX39 209 aa14.92□□□□□ -0.02
NKX2-1-202ENST00000498187 OR10J6PQ8NGY7 276 aa14.92□□□□□ -0.02
NKX2-1-202ENST00000498187 LY6EQ16553 131 aa14.92□□□□□ -0.02
NKX2-1-202ENST00000498187 SOCS3O14543 225 aa14.91□□□□□ -0.02
NKX2-1-202ENST00000498187 SPRY2O43597 315 aa14.91□□□□□ -0.02
NKX2-1-202ENST00000498187 ASIPP42127 132 aa14.91□□□□□ -0.02
NKX2-1-202ENST00000498187 SCGB2A2Q13296 93 aa14.91□□□□□ -0.02
NKX2-1-202ENST00000498187 C2orf66Q6UXQ4 117 aa14.91□□□□□ -0.02
NKX2-1-202ENST00000498187 CYSLTR1Q9Y271 337 aa14.91□□□□□ -0.02
NKX2-1-202ENST00000498187 PHLDA3Q9Y5J5 127 aa14.91□□□□□ -0.02
NKX2-1-202ENST00000498187 IGHV3-11P01762 117 aa14.91□□□□□ -0.02
NKX2-1-202ENST00000498187 SH2D6Q7Z4S9 175 aa14.91□□□□□ -0.02
NKX2-1-202ENST00000498187 IGHV4-61A0A0C4DH41 118 aa14.9□□□□□ -0.02
NKX2-1-202ENST00000498187 OVOL1O14753 267 aa14.9□□□□□ -0.02
NKX2-1-202ENST00000498187 PPP1R17O96001 155 aa14.9□□□□□ -0.02
NKX2-1-202ENST00000498187 LGALS1P09382 135 aaKnown RBP14.9□□□□□ -0.02
NKX2-1-202ENST00000498187 BAALCQ8WXS3 180 aa14.9□□□□□ -0.02
NKX2-1-202ENST00000498187 GNLYP22749 145 aa14.89□□□□□ -0.03
NKX2-1-202ENST00000498187 C14orf178Q8N769 122 aaPredicted RBP14.89□□□□□ -0.03
NKX2-1-202ENST00000498187 SPAG8Q99932 426 aaPredicted RBP14.89□□□□□ -0.03
NKX2-1-202ENST00000498187 SPATA25Q9BR10 227 aa14.89□□□□□ -0.03
NKX2-1-202ENST00000498187 PRO0461Q9UI25 63 aa14.89□□□□□ -0.03
NKX2-1-202ENST00000498187 IGHV4-38-2P0DP08 117 aa14.89□□□□□ -0.03
NKX2-1-202ENST00000498187 MED14OSP0DP75 135 aa14.89□□□□□ -0.03
NKX2-1-202ENST00000498187 RPL39LQ96EH5 51 aaKnown RBP14.89□□□□□ -0.03
NKX2-1-202ENST00000498187 RPL11P62913 178 aaKnown RBP14.88□□□□□ -0.03
NKX2-1-202ENST00000498187 SMAGPQ0VAQ4 97 aa14.88□□□□□ -0.03
NKX2-1-202ENST00000498187 PRADC1Q9BSG0 188 aa14.88□□□□□ -0.03
NKX2-1-202ENST00000498187 PRSS29PA6NIE9 313 aa14.88□□□□□ -0.03
NKX2-1-202ENST00000498187 PIMREGQ9BSJ6 248 aa14.88□□□□□ -0.03
NKX2-1-202ENST00000498187 MGPP08493 103 aa14.87□□□□□ -0.03
NKX2-1-202ENST00000498187 ANXA2RQ3ZCQ2 193 aa14.87□□□□□ -0.03
NKX2-1-202ENST00000498187 IGKV3-7A0A075B6H7 116 aa14.87□□□□□ -0.03
NKX2-1-202ENST00000498187 ZNF815PA8K554 130 aa14.87□□□□□ -0.03
NKX2-1-202ENST00000498187 F6UB75 175 aa14.87□□□□□ -0.03
NKX2-1-202ENST00000498187 H3BUX3 64 aa14.87□□□□□ -0.03
NKX2-1-202ENST00000498187 IGHG2P01859 326 aa14.87□□□□□ -0.03
NKX2-1-202ENST00000498187 MORN3Q6PF18 240 aaPredicted RBP14.87□□□□□ -0.03
NKX2-1-202ENST00000498187 USMG5Q96IX5 58 aa14.87□□□□□ -0.03
NKX2-1-202ENST00000498187 NDUFS8O00217 210 aa14.86□□□□□ -0.03
NKX2-1-202ENST00000498187 PF4V1P10720 104 aa14.86□□□□□ -0.03
NKX2-1-202ENST00000498187 SCGB1D4Q6XE38 83 aa14.86□□□□□ -0.03
NKX2-1-202ENST00000498187 PGPEP1Q9NXJ5 209 aa14.86□□□□□ -0.03
NKX2-1-202ENST00000498187 RNASE4P34096 147 aaKnown RBP14.86□□□□□ -0.03
NKX2-1-202ENST00000498187 MRPL16Q9NX20 251 aaKnown RBP14.86□□□□□ -0.03
NKX2-1-202ENST00000498187 H3BUA1 57 aa14.85□□□□□ -0.03
NKX2-1-202ENST00000498187 LCNL1Q6ZST4 164 aa14.85□□□□□ -0.03
NKX2-1-202ENST00000498187 RNF223E7ERA6 249 aa14.84□□□□□ -0.03
NKX2-1-202ENST00000498187 FAM19A4Q96LR4 140 aa14.84□□□□□ -0.03
NKX2-1-202ENST00000498187 A6NDX4 124 aa14.84□□□□□ -0.03
NKX2-1-202ENST00000498187 BLCAPP62952 87 aa14.84□□□□□ -0.03
NKX2-1-202ENST00000498187 SRSF9Q13242 221 aaKnown RBP eCLIP14.84□□□□□ -0.03
NKX2-1-202ENST00000498187 Q6ZS46 218 aa14.84□□□□□ -0.03
NKX2-1-202ENST00000498187 CLUHP3Q96NS8 147 aa14.84□□□□□ -0.03
NKX2-1-202ENST00000498187 LINC01549A6NIU2 74 aa14.83□□□□□ -0.03
NKX2-1-202ENST00000498187 BRI3O95415 125 aa14.83□□□□□ -0.03
NKX2-1-202ENST00000498187 PAPPA-AS1Q5QFB9 102 aa14.83□□□□□ -0.03
NKX2-1-202ENST00000498187 MTURNQ8N3F0 131 aa14.83□□□□□ -0.03
NKX2-1-202ENST00000498187 C10orf105Q8TEF2 133 aa14.83□□□□□ -0.03
NKX2-1-202ENST00000498187 RHPN1-AS1Q9BWJ2 59 aa14.83□□□□□ -0.03
NKX2-1-202ENST00000498187 AGRNO00468 2067 aa14.83□□□□□ -0.04
NKX2-1-202ENST00000498187 GNRH2O43555 120 aa14.83□□□□□ -0.04
NKX2-1-202ENST00000498187 DLX4Q92988 240 aaPredicted RBP14.83□□□□□ -0.04
NKX2-1-202ENST00000498187 COX6B1P14854 86 aa14.82□□□□□ -0.04
NKX2-1-202ENST00000498187 SPTAN1Q13813 2472 aaKnown RBP14.82□□□□□ -0.04
NKX2-1-202ENST00000498187 CCL19Q99731 98 aa14.82□□□□□ -0.04
NKX2-1-202ENST00000498187 CELSR1Q9NYQ6 3014 aa14.82□□□□□ -0.04
NKX2-1-202ENST00000498187 APOMO95445 188 aa14.82□□□□□ -0.04
NKX2-1-202ENST00000498187 POM121L12Q8N7R1 296 aa14.82□□□□□ -0.04
NKX2-1-202ENST00000498187 COL12A1Q99715 3063 aa14.82□□□□□ -0.04
NKX2-1-202ENST00000498187 TRBV7-9A0A0J9YWB2 115 aa14.81□□□□□ -0.04
NKX2-1-202ENST00000498187 UBE2D1P51668 147 aa14.81□□□□□ -0.04
NKX2-1-202ENST00000498187 HERVK_113P61574 105 aa14.81□□□□□ -0.04
NKX2-1-202ENST00000498187 APRG1Q8IVJ8 170 aa14.81□□□□□ -0.04
NKX2-1-202ENST00000498187 RNASE3P12724 160 aaKnown RBP14.81□□□□□ -0.04
NKX2-1-202ENST00000498187 RPL32P62910 135 aaKnown RBP14.81□□□□□ -0.04
NKX2-1-202ENST00000498187 ATP6V0E2Q8NHE4 81 aa14.81□□□□□ -0.04
NKX2-1-202ENST00000498187 PLEKHB2Q96CS7 222 aa14.8□□□□□ -0.04
NKX2-1-202ENST00000498187 SRD5A1P18405 259 aa14.8□□□□□ -0.04
NKX2-1-202ENST00000498187 CFAP126Q5VTH2 177 aa14.8□□□□□ -0.04
NKX2-1-202ENST00000498187 DAZ1Q9NQZ3 744 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms