RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 MED14OSP0DP75 135 aa11.27□□□□□ -0.61
SSBP1-214ENST00000498107 IFITM2Q01629 132 aa11.27□□□□□ -0.61
SSBP1-214ENST00000498107 C15orf53Q8NAA6 179 aa11.27□□□□□ -0.61
SSBP1-214ENST00000498107 SYT8Q8NBV8 401 aa11.27□□□□□ -0.61
SSBP1-214ENST00000498107 OCC1Q8TAD7 63 aa11.27□□□□□ -0.61
SSBP1-214ENST00000498107 PHLDA3Q9Y5J5 127 aa11.27□□□□□ -0.61
SSBP1-214ENST00000498107 RYR3Q15413 4870 aa11.27□□□□□ -0.61
SSBP1-214ENST00000498107 TRAV4A0A0B4J268 109 aa11.26□□□□□ -0.61
SSBP1-214ENST00000498107 TMEM88Q6PEY1 159 aa11.26□□□□□ -0.61
SSBP1-214ENST00000498107 OR4C5Q8NGB2 326 aa11.26□□□□□ -0.61
SSBP1-214ENST00000498107 APLNQ9ULZ1 77 aa11.26□□□□□ -0.61
SSBP1-214ENST00000498107 RPL19P84098 196 aaKnown RBP11.25□□□□□ -0.61
SSBP1-214ENST00000498107 OR2D3Q8NGH3 330 aa11.25□□□□□ -0.61
SSBP1-214ENST00000498107 DYNC2H1Q8NCM8 4307 aaKnown RBP11.25□□□□□ -0.61
SSBP1-214ENST00000498107 TRGV4A0A0C4DH28 118 aa11.24□□□□□ -0.61
SSBP1-214ENST00000498107 A8MWV9 139 aa11.24□□□□□ -0.61
SSBP1-214ENST00000498107 H3BNG1 76 aa11.24□□□□□ -0.61
SSBP1-214ENST00000498107 IGHV3-53P01767 116 aa11.24□□□□□ -0.61
SSBP1-214ENST00000498107 HOXA5P20719 270 aa11.24□□□□□ -0.61
SSBP1-214ENST00000498107 SOHLH1Q5JUK2 328 aa11.24□□□□□ -0.61
SSBP1-214ENST00000498107 ZFP82Q8N141 532 aa11.24□□□□□ -0.61
SSBP1-214ENST00000498107 SCRT2Q9NQ03 307 aa11.24□□□□□ -0.61
SSBP1-214ENST00000498107 TRAV26-1A0A087WT03 109 aa11.23□□□□□ -0.61
SSBP1-214ENST00000498107 K7EN84 100 aa11.23□□□□□ -0.61
SSBP1-214ENST00000498107 OR5AL1P0C617 328 aa11.23□□□□□ -0.61
SSBP1-214ENST00000498107 SRSF3P84103 164 aaKnown RBP11.23□□□□□ -0.61
SSBP1-214ENST00000498107 TMEM241Q24JQ0 296 aa11.23□□□□□ -0.61
SSBP1-214ENST00000498107 FAM231DQ6ZW35 169 aa11.23□□□□□ -0.61
SSBP1-214ENST00000498107 NUDT10Q8NFP7 164 aa11.23□□□□□ -0.61
SSBP1-214ENST00000498107 NUDT11Q96G61 164 aa11.23□□□□□ -0.61
SSBP1-214ENST00000498107 PRO0255Q9UI72 69 aa11.23□□□□□ -0.61
SSBP1-214ENST00000498107 C9JQL5 133 aa11.22□□□□□ -0.61
SSBP1-214ENST00000498107 RS1O15537 224 aa11.22□□□□□ -0.61
SSBP1-214ENST00000498107 SNAI2O43623 268 aa11.22□□□□□ -0.61
SSBP1-214ENST00000498107 LINC01551Q86U37 167 aa11.22□□□□□ -0.61
SSBP1-214ENST00000498107 ZNF575Q86XF7 245 aa11.22□□□□□ -0.61
SSBP1-214ENST00000498107 ZNF479Q96JC4 524 aa11.22□□□□□ -0.61
SSBP1-214ENST00000498107 SSBP4Q9BWG4 385 aaPredicted RBP11.22□□□□□ -0.61
SSBP1-214ENST00000498107 RPP21Q9H633 154 aaKnown RBP11.22□□□□□ -0.61
SSBP1-214ENST00000498107 NAT8Q9UHE5 227 aa11.22□□□□□ -0.61
SSBP1-214ENST00000498107 HHLA3Q9XRX5 114 aa11.22□□□□□ -0.61
SSBP1-214ENST00000498107 LCE6AA0A183 80 aa11.21□□□□□ -0.61
SSBP1-214ENST00000498107 A0A1W2PPQ1 181 aa11.21□□□□□ -0.61
SSBP1-214ENST00000498107 SFTA3P0C7M3 94 aa11.21□□□□□ -0.61
SSBP1-214ENST00000498107 ERVFC1-1P60608 527 aa11.21□□□□□ -0.61
SSBP1-214ENST00000498107 FHL2Q14192 279 aa11.21□□□□□ -0.61
SSBP1-214ENST00000498107 CFAP126Q5VTH2 177 aa11.21□□□□□ -0.61
SSBP1-214ENST00000498107 DMRTA1Q5VZB9 504 aa11.21□□□□□ -0.61
SSBP1-214ENST00000498107 LGALS9CQ6DKI2 356 aa11.21□□□□□ -0.61
SSBP1-214ENST00000498107 POM121L12Q8N7R1 296 aa11.21□□□□□ -0.61
SSBP1-214ENST00000498107 RNASE7Q9H1E1 156 aaKnown RBP11.21□□□□□ -0.61
SSBP1-214ENST00000498107 PLECQ15149 4684 aaKnown RBP11.2□□□□□ -0.62
SSBP1-214ENST00000498107 F2Z2F3 143 aa11.2□□□□□ -0.62
SSBP1-214ENST00000498107 M0R381 172 aa11.2□□□□□ -0.62
SSBP1-214ENST00000498107 PAX4O43316 350 aa11.2□□□□□ -0.62
SSBP1-214ENST00000498107 GATCO43716 136 aaKnown RBP11.2□□□□□ -0.62
SSBP1-214ENST00000498107 P0DMU3 169 aa11.2□□□□□ -0.62
SSBP1-214ENST00000498107 FAM231AP0DMU4 169 aa11.2□□□□□ -0.62
SSBP1-214ENST00000498107 FAM231CP0DMU5 169 aa11.2□□□□□ -0.62
SSBP1-214ENST00000498107 SPANXN1Q5VSR9 72 aa11.2□□□□□ -0.62
SSBP1-214ENST00000498107 ZFP2Q6ZN57 461 aa11.2□□□□□ -0.62
SSBP1-214ENST00000498107 FER1L6-AS1Q8NA97 138 aa11.2□□□□□ -0.62
SSBP1-214ENST00000498107 LINC00476Q8WZB0 136 aa11.2□□□□□ -0.62
SSBP1-214ENST00000498107 A0A0J9YY99 117 aa11.19□□□□□ -0.62
SSBP1-214ENST00000498107 RHODO00212 210 aa11.19□□□□□ -0.62
SSBP1-214ENST00000498107 NUDT3O95989 172 aa11.19□□□□□ -0.62
SSBP1-214ENST00000498107 CRYBA4P53673 196 aa11.19□□□□□ -0.62
SSBP1-214ENST00000498107 CT83Q5H943 113 aa11.19□□□□□ -0.62
SSBP1-214ENST00000498107 UQCC3Q6UW78 93 aa11.19□□□□□ -0.62
SSBP1-214ENST00000498107 C15orf54Q8N8G6 183 aa11.19□□□□□ -0.62
SSBP1-214ENST00000498107 OSTCQ9NRP0 149 aa11.19□□□□□ -0.62
SSBP1-214ENST00000498107 A8MWL6 223 aa11.18□□□□□ -0.62
SSBP1-214ENST00000498107 NXPH4O95158 308 aa11.18□□□□□ -0.62
SSBP1-214ENST00000498107 LY6G6CO95867 125 aa11.18□□□□□ -0.62
SSBP1-214ENST00000498107 IGLC6P0CF74 106 aa11.18□□□□□ -0.62
SSBP1-214ENST00000498107 CACNG7P62955 275 aa11.18□□□□□ -0.62
SSBP1-214ENST00000498107 OR10AG1Q8NH19 301 aa11.18□□□□□ -0.62
SSBP1-214ENST00000498107 SFRP2Q96HF1 295 aa11.18□□□□□ -0.62
SSBP1-214ENST00000498107 TPPP3Q9BW30 176 aa11.18□□□□□ -0.62
SSBP1-214ENST00000498107 GZMBP10144 247 aa11.17□□□□□ -0.62
SSBP1-214ENST00000498107 GATA1P15976 413 aaPredicted RBP11.17□□□□□ -0.62
SSBP1-214ENST00000498107 RPL23P62829 140 aaKnown RBP11.17□□□□□ -0.62
SSBP1-214ENST00000498107 ADIRFQ15847 76 aa11.17□□□□□ -0.62
SSBP1-214ENST00000498107 ISOC2Q96AB3 205 aa11.17□□□□□ -0.62
SSBP1-214ENST00000498107 VSIG2Q96IQ7 327 aa11.17□□□□□ -0.62
SSBP1-214ENST00000498107 ICOSQ9Y6W8 199 aa11.17□□□□□ -0.62
SSBP1-214ENST00000498107 NACAE9PAV3 2078 aa11.16□□□□□ -0.62
SSBP1-214ENST00000498107 TRBV6-4A0A1B0GX49 114 aa11.16□□□□□ -0.62
SSBP1-214ENST00000498107 MRPL23Q16540 153 aaKnown RBP11.16□□□□□ -0.62
SSBP1-214ENST00000498107 RNF212Q495C1 297 aa11.16□□□□□ -0.62
SSBP1-214ENST00000498107 WDR73Q6P4I2 378 aa11.16□□□□□ -0.62
SSBP1-214ENST00000498107 UBE2DNLQ8IWF7 75 aa11.16□□□□□ -0.62
SSBP1-214ENST00000498107 PRADC1Q9BSG0 188 aa11.16□□□□□ -0.62
SSBP1-214ENST00000498107 IGHV3-73A0A0B4J1V6 119 aa11.15□□□□□ -0.62
SSBP1-214ENST00000498107 CCL18P55774 89 aa11.15□□□□□ -0.62
SSBP1-214ENST00000498107 RHOHQ15669 191 aa11.15□□□□□ -0.62
SSBP1-214ENST00000498107 AP1S3Q96PC3 154 aa11.15□□□□□ -0.62
SSBP1-214ENST00000498107 FAM231BA6NCW3 169 aa11.14□□□□□ -0.63
SSBP1-214ENST00000498107 SMIM17P0DL12 118 aa11.14□□□□□ -0.63
SSBP1-214ENST00000498107 CTRLP40313 264 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 187.9 ms