RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 WDR73Q6P4I2 378 aa11.4□□□□□ -0.58
CTDSP1-214ENST00000497677 DKK2Q9UBU2 259 aa11.4□□□□□ -0.58
CTDSP1-214ENST00000497677 TRAV21A0A0B4J279 112 aa11.39□□□□□ -0.59
CTDSP1-214ENST00000497677 HIGD1CA8MV81 97 aa11.39□□□□□ -0.59
CTDSP1-214ENST00000497677 MT-ND6P03923 174 aa11.39□□□□□ -0.59
CTDSP1-214ENST00000497677 SPART-AS1P0CW21 52 aa11.39□□□□□ -0.59
CTDSP1-214ENST00000497677 CDKN1BP46527 198 aa11.39□□□□□ -0.59
CTDSP1-214ENST00000497677 EMP1P54849 157 aa11.39□□□□□ -0.59
CTDSP1-214ENST00000497677 RRN3P1Q2M238 152 aa11.39□□□□□ -0.59
CTDSP1-214ENST00000497677 LINC01559Q495D7 138 aa11.39□□□□□ -0.59
CTDSP1-214ENST00000497677 TRAV10A0A0B4J240 114 aa11.38□□□□□ -0.59
CTDSP1-214ENST00000497677 A0A1B0GW15 77 aa11.38□□□□□ -0.59
CTDSP1-214ENST00000497677 GPX1P07203 203 aa11.38□□□□□ -0.59
CTDSP1-214ENST00000497677 ZFAND2AQ8N6M9 145 aa11.38□□□□□ -0.59
CTDSP1-214ENST00000497677 NUP35Q8NFH5 326 aa11.38□□□□□ -0.59
CTDSP1-214ENST00000497677 BORCS7Q96B45 105 aa11.38□□□□□ -0.59
CTDSP1-214ENST00000497677 TMEM208Q9BTX3 173 aa11.38□□□□□ -0.59
CTDSP1-214ENST00000497677 APLNQ9ULZ1 77 aa11.38□□□□□ -0.59
CTDSP1-214ENST00000497677 TMA7Q9Y2S6 64 aaKnown RBP11.38□□□□□ -0.59
CTDSP1-214ENST00000497677 PLAC8L1A1L4L8 177 aa11.37□□□□□ -0.59
CTDSP1-214ENST00000497677 KLLNB2CW77 178 aa11.37□□□□□ -0.59
CTDSP1-214ENST00000497677 S100A8P05109 93 aa11.37□□□□□ -0.59
CTDSP1-214ENST00000497677 AZU1P20160 251 aa11.37□□□□□ -0.59
CTDSP1-214ENST00000497677 ZNF80P51504 273 aaPredicted RBP11.37□□□□□ -0.59
CTDSP1-214ENST00000497677 FAM222AQ5U5X8 452 aa11.37□□□□□ -0.59
CTDSP1-214ENST00000497677 GNB1LQ9BYB4 327 aa11.37□□□□□ -0.59
CTDSP1-214ENST00000497677 IGLL5B9A064 214 aa11.36□□□□□ -0.59
CTDSP1-214ENST00000497677 LY6G6CO95867 125 aa11.36□□□□□ -0.59
CTDSP1-214ENST00000497677 ORM1P02763 201 aa11.36□□□□□ -0.59
CTDSP1-214ENST00000497677 TCL1AP56279 114 aa11.36□□□□□ -0.59
CTDSP1-214ENST00000497677 TCTAP57738 103 aa11.36□□□□□ -0.59
CTDSP1-214ENST00000497677 LINC01587Q99440 93 aa11.36□□□□□ -0.59
CTDSP1-214ENST00000497677 DEFB131BA0A096LNP1 70 aa11.35□□□□□ -0.59
CTDSP1-214ENST00000497677 F2Z2F3 143 aa11.35□□□□□ -0.59
CTDSP1-214ENST00000497677 RIGQ13278 110 aa11.35□□□□□ -0.59
CTDSP1-214ENST00000497677 GFI1BQ5VTD9 330 aa11.35□□□□□ -0.59
CTDSP1-214ENST00000497677 LGALS9CQ6DKI2 356 aa11.35□□□□□ -0.59
CTDSP1-214ENST00000497677 TMEM256Q8N2U0 113 aa11.35□□□□□ -0.59
CTDSP1-214ENST00000497677 GTSF1Q8WW33 167 aa11.35□□□□□ -0.59
CTDSP1-214ENST00000497677 TEX48A0A1B0GUV7 120 aa11.34□□□□□ -0.59
CTDSP1-214ENST00000497677 HLA-DQA1P01909 254 aa11.34□□□□□ -0.59
CTDSP1-214ENST00000497677 C20orf144Q9BQM9 153 aa11.34□□□□□ -0.59
CTDSP1-214ENST00000497677 TRAPPC1Q9Y5R8 145 aa11.34□□□□□ -0.59
CTDSP1-214ENST00000497677 IGHV4-4A0A075B6R2 117 aa11.33□□□□□ -0.6
CTDSP1-214ENST00000497677 A0A1B0GUT8 65 aa11.33□□□□□ -0.6
CTDSP1-214ENST00000497677 C7orf71A4D174 169 aa11.33□□□□□ -0.6
CTDSP1-214ENST00000497677 TRGC2P03986 189 aa11.33□□□□□ -0.6
CTDSP1-214ENST00000497677 HBBP68871 147 aa11.33□□□□□ -0.6
CTDSP1-214ENST00000497677 FER1L6-AS1Q8NA97 138 aa11.33□□□□□ -0.6
CTDSP1-214ENST00000497677 KCNS1Q96KK3 526 aa11.33□□□□□ -0.6
CTDSP1-214ENST00000497677 PGLYRP4Q96LB8 373 aa11.33□□□□□ -0.6
CTDSP1-214ENST00000497677 KMT2AQ03164 3969 aa11.33□□□□□ -0.6
CTDSP1-214ENST00000497677 A0A1B0GXF2 115 aa11.32□□□□□ -0.6
CTDSP1-214ENST00000497677 RNASE4P34096 147 aaKnown RBP11.32□□□□□ -0.6
CTDSP1-214ENST00000497677 CTRLP40313 264 aa11.32□□□□□ -0.6
CTDSP1-214ENST00000497677 MRPL54Q6P161 138 aaKnown RBP11.32□□□□□ -0.6
CTDSP1-214ENST00000497677 RNASE8Q8TDE3 154 aaKnown RBP11.32□□□□□ -0.6
CTDSP1-214ENST00000497677 SNURFLB1AK76 121 aa11.31□□□□□ -0.6
CTDSP1-214ENST00000497677 IGLC6P0CF74 106 aa11.31□□□□□ -0.6
CTDSP1-214ENST00000497677 MED14OSP0DP75 135 aa11.31□□□□□ -0.6
CTDSP1-214ENST00000497677 DNLZQ5SXM8 178 aa11.31□□□□□ -0.6
CTDSP1-214ENST00000497677 VPS13DQ5THJ4 4388 aa11.31□□□□□ -0.6
CTDSP1-214ENST00000497677 TRAV12-3A0A0B4J271 114 aa11.3□□□□□ -0.6
CTDSP1-214ENST00000497677 IGKV3D-20A0A0C4DH25 116 aa11.3□□□□□ -0.6
CTDSP1-214ENST00000497677 LYRM9A8MSI8 78 aa11.3□□□□□ -0.6
CTDSP1-214ENST00000497677 J3KRW8 73 aa11.3□□□□□ -0.6
CTDSP1-214ENST00000497677 ZNF324O75467 553 aaPredicted RBP11.3□□□□□ -0.6
CTDSP1-214ENST00000497677 S100A6P06703 90 aa11.3□□□□□ -0.6
CTDSP1-214ENST00000497677 HTN1P15515 57 aa11.3□□□□□ -0.6
CTDSP1-214ENST00000497677 PRR9Q5T870 116 aa11.3□□□□□ -0.6
CTDSP1-214ENST00000497677 ZNF493Q6ZR52 646 aa11.3□□□□□ -0.6
CTDSP1-214ENST00000497677 TMEM136Q6ZRR5 245 aa11.3□□□□□ -0.6
CTDSP1-214ENST00000497677 FRZBQ92765 325 aa11.3□□□□□ -0.6
CTDSP1-214ENST00000497677 CNFNQ9BYD5 112 aa11.3□□□□□ -0.6
CTDSP1-214ENST00000497677 TMSB15BA0A087X1C1 80 aa11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 PHOX2AO14813 284 aa11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 SPINK4O60575 86 aa11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 OR5AL1P0C617 328 aa11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 GZMBP10144 247 aa11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 RAB4BP61018 213 aa11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 DAD1P61803 113 aa11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 CACNG7P62955 275 aa11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 FABP9Q0Z7S8 132 aa11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 TDRG1Q3Y452 100 aa11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 FAM159AQ6UWV7 190 aa11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 GATD1Q8NB37 220 aa11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 TMEM263Q8WUH6 116 aaKnown RBP11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 C16orf74Q96GX8 76 aa11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 MRPL18Q9H0U6 180 aaKnown RBP11.29□□□□□ -0.6
CTDSP1-214ENST00000497677 ASIPP42127 132 aa11.28□□□□□ -0.6
CTDSP1-214ENST00000497677 LYZL1Q6UWQ5 148 aa11.28□□□□□ -0.6
CTDSP1-214ENST00000497677 TPPP3Q9BW30 176 aa11.28□□□□□ -0.6
CTDSP1-214ENST00000497677 SSBP4Q9BWG4 385 aaPredicted RBP11.28□□□□□ -0.6
CTDSP1-214ENST00000497677 C11orf21Q9P2W6 132 aa11.28□□□□□ -0.6
CTDSP1-214ENST00000497677 TIMM8BQ9Y5J9 83 aaPredicted RBP11.28□□□□□ -0.6
CTDSP1-214ENST00000497677 SNAI2O43623 268 aa11.27□□□□□ -0.61
CTDSP1-214ENST00000497677 APCSP02743 223 aa11.27□□□□□ -0.61
CTDSP1-214ENST00000497677 HIST1H2BKO60814 126 aa11.26□□□□□ -0.61
CTDSP1-214ENST00000497677 HIST1H2BJP06899 126 aa11.26□□□□□ -0.61
CTDSP1-214ENST00000497677 ARMS2P0C7Q2 107 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms