RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 C11orf21Q9P2W6 132 aa11.56□□□□□ -0.56
SMC4-226ENST00000497311 TRAV8-6A0A0B4J262 113 aa11.55□□□□□ -0.56
SMC4-226ENST00000497311 KRTAP10-1P60331 282 aa11.55□□□□□ -0.56
SMC4-226ENST00000497311 FLI1Q01543 452 aaPredicted RBP11.55□□□□□ -0.56
SMC4-226ENST00000497311 RHOHQ15669 191 aa11.55□□□□□ -0.56
SMC4-226ENST00000497311 ZFP69Q49AA0 526 aa11.55□□□□□ -0.56
SMC4-226ENST00000497311 SMUG1Q53HV7 270 aa11.55□□□□□ -0.56
SMC4-226ENST00000497311 EPDR1Q9UM22 224 aa11.55□□□□□ -0.56
SMC4-226ENST00000497311 IGHV3-73A0A0B4J1V6 119 aa11.54□□□□□ -0.56
SMC4-226ENST00000497311 TRBV6-4A0A1B0GX49 114 aa11.54□□□□□ -0.56
SMC4-226ENST00000497311 KANTRA0A1W2PQU2 76 aa11.54□□□□□ -0.56
SMC4-226ENST00000497311 BCL2L11O43521 198 aa11.54□□□□□ -0.56
SMC4-226ENST00000497311 PSCAO43653 123 aa11.54□□□□□ -0.56
SMC4-226ENST00000497311 IGLV2-11P01706 119 aa11.54□□□□□ -0.56
SMC4-226ENST00000497311 LINC01556Q5JQF7 62 aa11.54□□□□□ -0.56
SMC4-226ENST00000497311 OR10J3Q5JRS4 329 aa11.54□□□□□ -0.56
SMC4-226ENST00000497311 DPPA3Q6W0C5 159 aa11.54□□□□□ -0.56
SMC4-226ENST00000497311 PRNTQ86SH4 94 aa11.54□□□□□ -0.56
SMC4-226ENST00000497311 C9orf85Q96MD7 179 aa11.54□□□□□ -0.56
SMC4-226ENST00000497311 FAT1Q14517 4588 aa11.54□□□□□ -0.56
SMC4-226ENST00000497311 A0A1W2PRE2 83 aa11.53□□□□□ -0.56
SMC4-226ENST00000497311 GGTLC3B5MD39 225 aa11.53□□□□□ -0.56
SMC4-226ENST00000497311 SEC11BP0C7V7 166 aa11.53□□□□□ -0.56
SMC4-226ENST00000497311 GCSHP23434 173 aa11.53□□□□□ -0.56
SMC4-226ENST00000497311 TCTE3Q8IZS6 198 aa11.53□□□□□ -0.56
SMC4-226ENST00000497311 CYB561D1Q8N8Q1 229 aa11.53□□□□□ -0.56
SMC4-226ENST00000497311 TMEM75Q8N9X5 138 aa11.53□□□□□ -0.56
SMC4-226ENST00000497311 ZNF471Q9BX82 626 aaPredicted RBP11.53□□□□□ -0.56
SMC4-226ENST00000497311 PGPEP1LA6NFU8 196 aa11.52□□□□□ -0.57
SMC4-226ENST00000497311 IBA57-AS1B1ANH7 110 aa11.52□□□□□ -0.57
SMC4-226ENST00000497311 ZNF506Q5JVG8 444 aa11.52□□□□□ -0.57
SMC4-226ENST00000497311 SAPCD1Q5SSQ6 148 aa11.52□□□□□ -0.57
SMC4-226ENST00000497311 TMUB2Q71RG4 321 aa11.52□□□□□ -0.57
SMC4-226ENST00000497311 PTH2Q96A98 100 aa11.52□□□□□ -0.57
SMC4-226ENST00000497311 MAP1LC3B2A6NCE7 125 aa11.51□□□□□ -0.57
SMC4-226ENST00000497311 UMAD1C9J7I0 102 aa11.51□□□□□ -0.57
SMC4-226ENST00000497311 PFDN1O60925 122 aa11.51□□□□□ -0.57
SMC4-226ENST00000497311 MGST1P10620 155 aaKnown RBP11.51□□□□□ -0.57
SMC4-226ENST00000497311 RNASE3P12724 160 aaKnown RBP11.51□□□□□ -0.57
SMC4-226ENST00000497311 FGF8P55075 233 aaPredicted RBP11.51□□□□□ -0.57
SMC4-226ENST00000497311 EIF5AP63241 154 aaKnown RBP11.51□□□□□ -0.57
SMC4-226ENST00000497311 LELP1Q5T871 98 aa11.51□□□□□ -0.57
SMC4-226ENST00000497311 FRZBQ92765 325 aa11.51□□□□□ -0.57
SMC4-226ENST00000497311 MAP1LC3BQ9GZQ8 125 aa11.51□□□□□ -0.57
SMC4-226ENST00000497311 FHITP49789 147 aa11.5□□□□□ -0.57
SMC4-226ENST00000497311 ATP6V0E2Q8NHE4 81 aa11.5□□□□□ -0.57
SMC4-226ENST00000497311 GTSF1LQ9H1H1 148 aa11.5□□□□□ -0.57
SMC4-226ENST00000497311 Q9HAA7 133 aa11.5□□□□□ -0.57
SMC4-226ENST00000497311 VPS13BQ7Z7G8 4022 aa11.5□□□□□ -0.57
SMC4-226ENST00000497311 IGLV5-52A0A0A0MRZ9 124 aa11.49□□□□□ -0.57
SMC4-226ENST00000497311 LRCOL1A6NCL2 159 aa11.49□□□□□ -0.57
SMC4-226ENST00000497311 IGHV3-30P01768 117 aa11.49□□□□□ -0.57
SMC4-226ENST00000497311 IGHV3-33P01772 117 aa11.49□□□□□ -0.57
SMC4-226ENST00000497311 INAFM2P0DMQ5 153 aa11.49□□□□□ -0.57
SMC4-226ENST00000497311 IGHV3-30-3P0DP02 117 aa11.49□□□□□ -0.57
SMC4-226ENST00000497311 IGHV3-30-5P0DP03 117 aa11.49□□□□□ -0.57
SMC4-226ENST00000497311 S100A4P26447 101 aaKnown RBP11.49□□□□□ -0.57
SMC4-226ENST00000497311 Q5VSD8 79 aa11.49□□□□□ -0.57
SMC4-226ENST00000497311 STOML3Q8TAV4 291 aa11.49□□□□□ -0.57
SMC4-226ENST00000497311 NTN5Q8WTR8 489 aaPredicted RBP11.49□□□□□ -0.57
SMC4-226ENST00000497311 LINC00479Q96M42 142 aa11.49□□□□□ -0.57
SMC4-226ENST00000497311 NKX6-2Q9C056 277 aaPredicted RBP11.49□□□□□ -0.57
SMC4-226ENST00000497311 FAM74A7A6NL05 159 aa11.48□□□□□ -0.57
SMC4-226ENST00000497311 IFNA7P01567 189 aa11.48□□□□□ -0.57
SMC4-226ENST00000497311 C1QBP02746 253 aa11.48□□□□□ -0.57
SMC4-226ENST00000497311 TPT1P13693 172 aaKnown RBP11.48□□□□□ -0.57
SMC4-226ENST00000497311 UBE2G2P60604 165 aa11.48□□□□□ -0.57
SMC4-226ENST00000497311 LGALSLQ3ZCW2 172 aaPredicted RBP11.48□□□□□ -0.57
SMC4-226ENST00000497311 TRAV34A0A0B4J273 112 aa11.47□□□□□ -0.57
SMC4-226ENST00000497311 IGKV3D-20A0A0C4DH25 116 aa11.47□□□□□ -0.57
SMC4-226ENST00000497311 FABP5P3A8MUU1 101 aa11.47□□□□□ -0.57
SMC4-226ENST00000497311 A8MWV9 139 aa11.47□□□□□ -0.57
SMC4-226ENST00000497311 ZFP2Q6ZN57 461 aa11.47□□□□□ -0.57
SMC4-226ENST00000497311 FAM213BQ8TBF2 198 aa11.47□□□□□ -0.57
SMC4-226ENST00000497311 MBD3L1Q8WWY6 194 aa11.47□□□□□ -0.57
SMC4-226ENST00000497311 PARLQ9H300 379 aa11.47□□□□□ -0.57
SMC4-226ENST00000497311 ARL2-SNX15V9GYD0 113 aa11.47□□□□□ -0.57
SMC4-226ENST00000497311 hCG_2014768A0A024R1R8 64 aa11.46□□□□□ -0.57
SMC4-226ENST00000497311 SMR3BP02814 79 aaPredicted RBP11.46□□□□□ -0.57
SMC4-226ENST00000497311 ASIPP42127 132 aa11.46□□□□□ -0.57
SMC4-226ENST00000497311 PIK3CD-AS1Q5SR53 167 aa11.46□□□□□ -0.57
SMC4-226ENST00000497311 AKAP14Q86UN6 197 aa11.46□□□□□ -0.57
SMC4-226ENST00000497311 Q8N814 137 aa11.46□□□□□ -0.57
SMC4-226ENST00000497311 GAGE12JA6NER3 117 aa11.45□□□□□ -0.58
SMC4-226ENST00000497311 GAGE1Q13065 139 aa11.45□□□□□ -0.58
SMC4-226ENST00000497311 GAGE4Q13068 117 aa11.45□□□□□ -0.58
SMC4-226ENST00000497311 GAGE5Q13069 117 aa11.45□□□□□ -0.58
SMC4-226ENST00000497311 LAGE3Q14657 143 aa11.45□□□□□ -0.58
SMC4-226ENST00000497311 GAGE13Q4V321 117 aa11.45□□□□□ -0.58
SMC4-226ENST00000497311 Q6ZSN1 163 aa11.45□□□□□ -0.58
SMC4-226ENST00000497311 SFT2D1Q8WV19 159 aa11.45□□□□□ -0.58
SMC4-226ENST00000497311 HIST1H2BAQ96A08 127 aa11.45□□□□□ -0.58
SMC4-226ENST00000497311 DNAH8Q96JB1 4490 aa11.44□□□□□ -0.58
SMC4-226ENST00000497311 PEX7O00628 323 aa11.44□□□□□ -0.58
SMC4-226ENST00000497311 TCEAL7Q9BRU2 100 aa11.44□□□□□ -0.58
SMC4-226ENST00000497311 TMEM70Q9BUB7 260 aa11.44□□□□□ -0.58
SMC4-226ENST00000497311 TM2D2Q9BX73 214 aa11.44□□□□□ -0.58
SMC4-226ENST00000497311 IL36BQ9NZH7 164 aa11.44□□□□□ -0.58
SMC4-226ENST00000497311 HERC1Q15751 4861 aa11.43□□□□□ -0.58
SMC4-226ENST00000497311 B4DEV8 164 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms