RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 CHAC1Q9BUX1 264 aa5.1□□□□□ -1.59
HOXA9-206ENST00000497089 SLC25A2Q9BXI2 301 aa5.1□□□□□ -1.59
HOXA9-206ENST00000497089 RPP21Q9H633 154 aaKnown RBP5.1□□□□□ -1.59
HOXA9-206ENST00000497089 SIGLEC9Q9Y336 463 aa5.1□□□□□ -1.59
HOXA9-206ENST00000497089 LSM4Q9Y4Z0 139 aaKnown RBP5.1□□□□□ -1.59
HOXA9-206ENST00000497089 TRRAPQ9Y4A5 3859 aa5.1□□□□□ -1.59
HOXA9-206ENST00000497089 A0A087WX48 190 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 TCRBV4S1A1TA0A5B7 111 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 SNAI2O43623 268 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 ZNF688P0C7X2 276 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 IFITM1P13164 125 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 EVI2AP22794 236 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 XGP55808 180 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 NDUFV3P56181 108 aaKnown RBP5.09□□□□□ -1.59
HOXA9-206ENST00000497089 GAGE2BQ13066 116 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 GAGE2EQ4V326 116 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 SH2D6Q7Z4S9 175 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 DRAM1Q8N682 238 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 GATD1Q8NB37 220 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 DLX4Q92988 240 aaPredicted RBP5.09□□□□□ -1.59
HOXA9-206ENST00000497089 ZNF414Q96IQ9 312 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 C20orf78Q9BR46 151 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 PRSS22Q9GZN4 317 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 ZNF355PQ9NSJ1 428 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 GAGE2DQ9UEU5 116 aa5.09□□□□□ -1.59
HOXA9-206ENST00000497089 PLXNB1O43157 2135 aa5.09□□□□□ -1.6
HOXA9-206ENST00000497089 TRAV5A0A0B4J249 113 aa5.08□□□□□ -1.6
HOXA9-206ENST00000497089 LINC01548A6NM66 108 aa5.08□□□□□ -1.6
HOXA9-206ENST00000497089 BUB1B-PAK6H3BSN5 160 aa5.08□□□□□ -1.6
HOXA9-206ENST00000497089 M0QXV9 152 aa5.08□□□□□ -1.6
HOXA9-206ENST00000497089 SNCGO76070 127 aa5.08□□□□□ -1.6
HOXA9-206ENST00000497089 SLC25A5P05141 298 aaKnown RBP5.08□□□□□ -1.6
HOXA9-206ENST00000497089 DEFA4P12838 97 aa5.08□□□□□ -1.6
HOXA9-206ENST00000497089 ID1P41134 155 aa5.08□□□□□ -1.6
HOXA9-206ENST00000497089 NMUP48645 174 aa5.08□□□□□ -1.6
HOXA9-206ENST00000497089 BLCAPP62952 87 aa5.08□□□□□ -1.6
HOXA9-206ENST00000497089 RIGQ13278 110 aa5.08□□□□□ -1.6
HOXA9-206ENST00000497089 TMEM219Q86XT9 240 aa5.08□□□□□ -1.6
HOXA9-206ENST00000497089 OR13A1Q8NGR1 328 aa5.08□□□□□ -1.6
HOXA9-206ENST00000497089 NHP2Q9NX24 153 aaKnown RBP5.08□□□□□ -1.6
HOXA9-206ENST00000497089 CALYQ9NYX4 217 aa5.08□□□□□ -1.6
HOXA9-206ENST00000497089 NOTCH3Q9UM47 2321 aa5.08□□□□□ -1.6
HOXA9-206ENST00000497089 TEX22C9J3V5 150 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 PRSS46E5RG02 174 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 PEX7O00628 323 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 APOHP02749 345 aaPredicted RBP5.07□□□□□ -1.6
HOXA9-206ENST00000497089 C8orf88P0DMB2 117 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 FXYD2P54710 66 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 FOXA3P55318 350 aaPredicted RBP5.07□□□□□ -1.6
HOXA9-206ENST00000497089 ERVK-16P61578 105 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 MRPL23Q16540 153 aaKnown RBP5.07□□□□□ -1.6
HOXA9-206ENST00000497089 C12orf74Q32Q52 190 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 UTF1Q5T230 341 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 KPRPQ5T749 579 aaPredicted RBP5.07□□□□□ -1.6
HOXA9-206ENST00000497089 CFAP126Q5VTH2 177 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 MIR17HGQ75NE6 70 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 TEN1Q86WV5 123 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 NDUFA11Q86Y39 141 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 C8orf31Q8N9H6 132 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 PRSS3P2Q8NHM4 247 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 RPEQ96AT9 228 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 DNAJC30Q96LL9 226 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 HSD17B10Q99714 261 aaKnown RBP5.07□□□□□ -1.6
HOXA9-206ENST00000497089 RAB9BQ9NP90 201 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 AMMECR1Q9Y4X0 333 aaPredicted RBP5.07□□□□□ -1.6
HOXA9-206ENST00000497089 TGP01266 2768 aa5.07□□□□□ -1.6
HOXA9-206ENST00000497089 A0A1W2PPI3 338 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 TMEM30CPA0ZSE6 113 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 GGTLC3B5MD39 225 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 C15orf65H3BRN8 121 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 HSPB6O14558 160 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 P01737 135 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 HBDP02042 147 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 KIR2DS2P43631 304 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 EIF4EBP1Q13541 118 aaPredicted RBP5.06□□□□□ -1.6
HOXA9-206ENST00000497089 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 TMEM78Q5T7P6 136 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 ZNF497Q6ZNH5 498 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 LINC00311Q8N616 119 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 OR8A1Q8NGG7 326 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 OR10J6PQ8NGY7 276 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 DDB2Q92466 427 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 ENY2Q9NPA8 101 aa5.06□□□□□ -1.6
HOXA9-206ENST00000497089 CSDC2Q9Y534 153 aaKnown RBP5.06□□□□□ -1.6
HOXA9-206ENST00000497089 TRBV20-1A0A075B6N2 111 aa5.05□□□□□ -1.6
HOXA9-206ENST00000497089 IL4P05112 153 aa5.05□□□□□ -1.6
HOXA9-206ENST00000497089 CRYGBP07316 175 aa5.05□□□□□ -1.6
HOXA9-206ENST00000497089 FAM106CPP0CH98 169 aa5.05□□□□□ -1.6
HOXA9-206ENST00000497089 CD28P10747 220 aa5.05□□□□□ -1.6
HOXA9-206ENST00000497089 CD24P25063 80 aa5.05□□□□□ -1.6
HOXA9-206ENST00000497089 DUTP33316 252 aaKnown RBP5.05□□□□□ -1.6
HOXA9-206ENST00000497089 ZNF137PP52743 207 aa5.05□□□□□ -1.6
HOXA9-206ENST00000497089 SEC61GP60059 68 aa5.05□□□□□ -1.6
HOXA9-206ENST00000497089 CACNG7P62955 275 aa5.05□□□□□ -1.6
HOXA9-206ENST00000497089 UBE2L3P68036 154 aaKnown RBP5.05□□□□□ -1.6
HOXA9-206ENST00000497089 ZNF816Q0VGE8 651 aaPredicted RBP5.05□□□□□ -1.6
HOXA9-206ENST00000497089 EBI3Q14213 229 aa5.05□□□□□ -1.6
HOXA9-206ENST00000497089 TMEM30BQ3MIR4 351 aa5.05□□□□□ -1.6
HOXA9-206ENST00000497089 SLC25A48Q6ZT89 311 aaKnown RBP5.05□□□□□ -1.6
HOXA9-206ENST00000497089 OR13C6PQ8NH95 151 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms