RNA–Protein interactions for RNA: ENST00000496653.4

LIMS1-213, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 4

Gene LIMS1, Length 626 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-213ENST00000496653 HOXA5P20719 270 aa10.27□□□□□ -0.77
LIMS1-213ENST00000496653 RAB14P61106 215 aa10.27□□□□□ -0.77
LIMS1-213ENST00000496653 RNF212Q495C1 297 aa10.27□□□□□ -0.77
LIMS1-213ENST00000496653 PCNPQ8WW12 178 aaKnown RBP10.27□□□□□ -0.77
LIMS1-213ENST00000496653 SMDT1Q9H4I9 107 aa10.27□□□□□ -0.77
LIMS1-213ENST00000496653 PHLDA3Q9Y5J5 127 aa10.27□□□□□ -0.77
LIMS1-213ENST00000496653 RHODO00212 210 aa10.26□□□□□ -0.77
LIMS1-213ENST00000496653 PAX4O43316 350 aa10.26□□□□□ -0.77
LIMS1-213ENST00000496653 P01737 135 aa10.26□□□□□ -0.77
LIMS1-213ENST00000496653 IGHV3-53P01767 116 aa10.26□□□□□ -0.77
LIMS1-213ENST00000496653 CCL18P55774 89 aa10.26□□□□□ -0.77
LIMS1-213ENST00000496653 ZFP82Q8N141 532 aa10.26□□□□□ -0.77
LIMS1-213ENST00000496653 POM121L12Q8N7R1 296 aa10.26□□□□□ -0.77
LIMS1-213ENST00000496653 PARLQ9H300 379 aa10.26□□□□□ -0.77
LIMS1-213ENST00000496653 HHLA3Q9XRX5 114 aa10.26□□□□□ -0.77
LIMS1-213ENST00000496653 ICOSQ9Y6W8 199 aa10.26□□□□□ -0.77
LIMS1-213ENST00000496653 DYNC2H1Q8NCM8 4307 aaKnown RBP10.25□□□□□ -0.77
LIMS1-213ENST00000496653 ARMS2P0C7Q2 107 aa10.25□□□□□ -0.77
LIMS1-213ENST00000496653 SH2D6Q7Z4S9 175 aa10.25□□□□□ -0.77
LIMS1-213ENST00000496653 LY96Q9Y6Y9 160 aa10.25□□□□□ -0.77
LIMS1-213ENST00000496653 TENM2Q9NT68 2774 aa10.24□□□□□ -0.77
LIMS1-213ENST00000496653 TMSB15BA0A087X1C1 80 aa10.24□□□□□ -0.77
LIMS1-213ENST00000496653 A0A0J9YY99 117 aa10.24□□□□□ -0.77
LIMS1-213ENST00000496653 RAB19A4D1S5 217 aa10.24□□□□□ -0.77
LIMS1-213ENST00000496653 FHL2Q14192 279 aa10.24□□□□□ -0.77
LIMS1-213ENST00000496653 PEA15Q15121 130 aa10.24□□□□□ -0.77
LIMS1-213ENST00000496653 ZFP2Q6ZN57 461 aa10.24□□□□□ -0.77
LIMS1-213ENST00000496653 ZNF479Q96JC4 524 aa10.24□□□□□ -0.77
LIMS1-213ENST00000496653 SCRT2Q9NQ03 307 aa10.24□□□□□ -0.77
LIMS1-213ENST00000496653 ALMS1Q8TCU4 4167 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 TRBV20OR9-2A0A075B6H5 130 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 GRIFINA4D1Z8 144 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 RS1O15537 224 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 IGLV2-8P01709 118 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 OR5AL1P0C617 328 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 SFTA3P0C7M3 94 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 CEBPGP53567 150 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 CRYBA4P53673 196 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 RHOHQ15669 191 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 MRPL23Q16540 153 aaKnown RBP10.23□□□□□ -0.77
LIMS1-213ENST00000496653 FAM74A3Q4VXF1 159 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 CFAP126Q5VTH2 177 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 OR2D3Q8NGH3 330 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 SMIM7Q9BQ49 75 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 PRADC1Q9BSG0 188 aa10.23□□□□□ -0.77
LIMS1-213ENST00000496653 C19orf71A6NCJ1 209 aa10.22□□□□□ -0.77
LIMS1-213ENST00000496653 PGPEP1LA6NFU8 196 aa10.22□□□□□ -0.77
LIMS1-213ENST00000496653 TRBV6-4A0A1B0GX49 114 aa10.21□□□□□ -0.77
LIMS1-213ENST00000496653 A0A1W2PPQ1 181 aa10.21□□□□□ -0.77
LIMS1-213ENST00000496653 ZNF727A8MUV8 499 aa10.21□□□□□ -0.77
LIMS1-213ENST00000496653 M0R381 172 aa10.21□□□□□ -0.77
LIMS1-213ENST00000496653 SNAI2O43623 268 aa10.21□□□□□ -0.77
LIMS1-213ENST00000496653 GATA1P15976 413 aaPredicted RBP10.21□□□□□ -0.77
LIMS1-213ENST00000496653 SRIP30626 198 aa10.21□□□□□ -0.77
LIMS1-213ENST00000496653 RPL19P84098 196 aaKnown RBP10.21□□□□□ -0.77
LIMS1-213ENST00000496653 SPANXN1Q5VSR9 72 aa10.21□□□□□ -0.77
LIMS1-213ENST00000496653 VSIG2Q96IQ7 327 aa10.21□□□□□ -0.77
LIMS1-213ENST00000496653 PLECQ15149 4684 aaKnown RBP10.21□□□□□ -0.78
LIMS1-213ENST00000496653 F2Z2F3 143 aa10.2□□□□□ -0.78
LIMS1-213ENST00000496653 NXPH4O95158 308 aa10.2□□□□□ -0.78
LIMS1-213ENST00000496653 NEGR1Q7Z3B1 354 aa10.2□□□□□ -0.78
LIMS1-213ENST00000496653 FER1L6-AS1Q8NA97 138 aa10.2□□□□□ -0.78
LIMS1-213ENST00000496653 SSBP4Q9BWG4 385 aaPredicted RBP10.2□□□□□ -0.78
LIMS1-213ENST00000496653 RPP21Q9H633 154 aaKnown RBP10.2□□□□□ -0.78
LIMS1-213ENST00000496653 SACSQ9NZJ4 4579 aa10.19□□□□□ -0.78
LIMS1-213ENST00000496653 A0A096LPF7 62 aa10.19□□□□□ -0.78
LIMS1-213ENST00000496653 SRP19P09132 144 aaKnown RBP10.19□□□□□ -0.78
LIMS1-213ENST00000496653 CACNG7P62955 275 aa10.19□□□□□ -0.78
LIMS1-213ENST00000496653 DMRTA1Q5VZB9 504 aa10.19□□□□□ -0.78
LIMS1-213ENST00000496653 AP1S3Q96PC3 154 aa10.19□□□□□ -0.78
LIMS1-213ENST00000496653 GYPEP15421 78 aa10.18□□□□□ -0.78
LIMS1-213ENST00000496653 CT83Q5H943 113 aa10.18□□□□□ -0.78
LIMS1-213ENST00000496653 FAM231DQ6ZW35 169 aa10.18□□□□□ -0.78
LIMS1-213ENST00000496653 OCC1Q8TAD7 63 aa10.18□□□□□ -0.78
LIMS1-213ENST00000496653 SFRP2Q96HF1 295 aa10.18□□□□□ -0.78
LIMS1-213ENST00000496653 UPK3BQ9BT76 320 aa10.18□□□□□ -0.78
LIMS1-213ENST00000496653 TPPP3Q9BW30 176 aa10.18□□□□□ -0.78
LIMS1-213ENST00000496653 MUC4Q99102 2169 aa10.18□□□□□ -0.78
LIMS1-213ENST00000496653 DNAH1Q9P2D7 4330 aa10.18□□□□□ -0.78
LIMS1-213ENST00000496653 K7EN84 100 aa10.17□□□□□ -0.78
LIMS1-213ENST00000496653 K7EQD1 137 aa10.17□□□□□ -0.78
LIMS1-213ENST00000496653 SMIM17P0DL12 118 aa10.17□□□□□ -0.78
LIMS1-213ENST00000496653 TTC32Q5I0X7 151 aa10.17□□□□□ -0.78
LIMS1-213ENST00000496653 NUDT10Q8NFP7 164 aa10.17□□□□□ -0.78
LIMS1-213ENST00000496653 OR10AG1Q8NH19 301 aa10.17□□□□□ -0.78
LIMS1-213ENST00000496653 NUDT11Q96G61 164 aa10.17□□□□□ -0.78
LIMS1-213ENST00000496653 MRPS16Q9Y3D3 137 aaKnown RBP10.17□□□□□ -0.78
LIMS1-213ENST00000496653 LYSTQ99698 3801 aa10.16□□□□□ -0.78
LIMS1-213ENST00000496653 A8MWL6 223 aa10.16□□□□□ -0.78
LIMS1-213ENST00000496653 IGLC6P0CF74 106 aa10.16□□□□□ -0.78
LIMS1-213ENST00000496653 ERVFC1-1P60608 527 aa10.16□□□□□ -0.78
LIMS1-213ENST00000496653 TMEM241Q24JQ0 296 aa10.16□□□□□ -0.78
LIMS1-213ENST00000496653 CLLU1Q5K131 121 aa10.16□□□□□ -0.78
LIMS1-213ENST00000496653 FAM74A4Q5TZK3 123 aa10.16□□□□□ -0.78
LIMS1-213ENST00000496653 LINC01551Q86U37 167 aa10.16□□□□□ -0.78
LIMS1-213ENST00000496653 C15orf54Q8N8G6 183 aa10.16□□□□□ -0.78
LIMS1-213ENST00000496653 SLC25A29Q8N8R3 303 aa10.16□□□□□ -0.78
LIMS1-213ENST00000496653 IGHV3-73A0A0B4J1V6 119 aa10.15□□□□□ -0.78
LIMS1-213ENST00000496653 GATCO43716 136 aaKnown RBP10.15□□□□□ -0.78
LIMS1-213ENST00000496653 TRGC1P0CF51 173 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms