RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 OR10G8Q8NGN5 311 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 IGKV1D-37A0A075B6S9 117 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 TRBV9A0A0B4J1U6 114 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 CTXND1A0A1B0GTU2 59 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 RBP4P02753 201 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 COX6B1P14854 86 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 SLURP1P55000 103 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 LY6EQ16553 131 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 C10orf126Q8N4M7 172 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 BORCS7Q96B45 105 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 AMMECR1Q9Y4X0 333 aaPredicted RBP4.77□□□□□ -1.65
SSBP1-213ENST00000496622 PDZD2O15018 2839 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 TRAV1-1A0A0B4J248 108 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 TRAV4A0A0B4J268 109 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 A0A1B0GWB2 263 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 G3V318 75 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 PYYP10082 97 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 C9orf153Q5TBE3 101 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 ZNF502Q8TBZ5 544 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 ZNF503Q96F45 646 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 TIMM9Q9Y5J7 89 aa4.77□□□□□ -1.65
SSBP1-213ENST00000496622 KRTAP9-7A8MTY7 169 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 C11orf94C9JXX5 98 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 NDUFB4O95168 129 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 HBE1P02100 147 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 UBE2E1P51965 193 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 PATE2Q6UY27 113 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 LINC00482Q8N8I6 264 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 ARL2-SNX15V9GYD0 113 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 SNCGO76070 127 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 PSMB3P49720 205 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 ECSCRQ19T08 205 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 Q6Q795 121 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 OR4X2Q8NGF9 303 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 LINC00479Q96M42 142 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 F11RQ9Y624 299 aaKnown RBP4.76□□□□□ -1.65
SSBP1-213ENST00000496622 WNK1Q9H4A3 2382 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 TRBV20OR9-2A0A075B6H5 130 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 IGHV7-81A0A0B4J1V7 117 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 A0A1W2PS18 150 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 SYS1-DBNDD2H3BUS1 97 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 GAGE13Q4V321 117 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 LYRM7Q5U5X0 104 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 C2orf91Q6ZV80 131 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 Q8N9W7 124 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 OR10J6PQ8NGY7 276 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 KCNS1Q96KK3 526 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 SMIM7Q9BQ49 75 aa4.76□□□□□ -1.65
SSBP1-213ENST00000496622 KRTAP4-8A0A0G2JLE6 195 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 hDV102S1A0JD36 115 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 GGTLC3B5MD39 225 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 H3BMG7 143 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 K7EIM0 57 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 ZNF324O75467 553 aaPredicted RBP4.75□□□□□ -1.65
SSBP1-213ENST00000496622 MSMBP08118 114 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 EGR2P11161 476 aaPredicted RBP4.75□□□□□ -1.65
SSBP1-213ENST00000496622 BLCAPP62952 87 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 PAX8Q06710 450 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 CYP2G1PQ6ZSU1 146 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 NFE4Q86UQ8 179 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 PIFOQ8TCI5 191 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 C9orf85Q96MD7 179 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 C18orf15Q96N68 181 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 SCRT2Q9NQ03 307 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 ZNF355PQ9NSJ1 428 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 PYGO1Q9Y3Y4 419 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 I3L2K1 104 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 J3QQQ9 107 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 ATP6V0E1O15342 81 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 NDUFA3O95167 84 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 GCHFRP30047 84 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 SUB1P53999 127 aaKnown RBP eCLIP4.75□□□□□ -1.651e-6■■□□□ 12.6
SSBP1-213ENST00000496622 Q6ZQT7 251 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 LINC00305Q7Z4B0 112 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 BPIFA4PQ86YQ2 179 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 CIARTQ8N365 385 aaPredicted RBP4.75□□□□□ -1.65
SSBP1-213ENST00000496622 FAM19A2Q8N3H0 131 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 ATP6V0E2Q8NHE4 81 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 C11orf45Q8TAV5 145 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 CHCHD5Q9BSY4 110 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 ZNF331Q9NQX6 463 aaPredicted RBP4.75□□□□□ -1.65
SSBP1-213ENST00000496622 PRO0461Q9UI25 63 aa4.75□□□□□ -1.65
SSBP1-213ENST00000496622 IGHV3OR16-13A0A075B7E8 117 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 IGHV3-74A0A0B4J1X5 117 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 SPRY2O43597 315 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 IGKV1-17P01599 117 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 AMY1AP04745 511 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 PFN2P35080 140 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 LYZP61626 148 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 Q8N6K4 173 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 NPBQ8NG41 125 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 MLST8Q9BVC4 326 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 GNB4Q9HAV0 340 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 IGHV1-69DA0A0B4J2H0 117 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 TCRBV4S1A1TA0A5B7 111 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 COX7A2P2O60397 106 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 IGHV1-69P01742 117 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 CBLN1P23435 193 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 LEPP41159 167 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 CD164Q04900 197 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms