RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 PGPEP1LA6NFU8 196 aa8.72□□□□□ -1.01
FN1-226ENST00000496542 PSCAO43653 123 aa8.72□□□□□ -1.01
FN1-226ENST00000496542 KRTAP10-1P60331 282 aa8.72□□□□□ -1.01
FN1-226ENST00000496542 LINC01556Q5JQF7 62 aa8.72□□□□□ -1.01
FN1-226ENST00000496542 TRBV6-4A0A1B0GX49 114 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 A0A1W2PRE2 83 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 RNF222A6NCQ9 220 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 EPM2AB3EWF7 344 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 CIDEAO60543 219 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 IFNA7P01567 189 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 IGHV3-30P01768 117 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 IGHV3-33P01772 117 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 IGHV3-30-3P0DP02 117 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 IGHV3-30-5P0DP03 117 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 RNASE3P12724 160 aaKnown RBP8.71□□□□□ -1.02
FN1-226ENST00000496542 S100A4P26447 101 aaKnown RBP8.71□□□□□ -1.02
FN1-226ENST00000496542 UBE2G2P60604 165 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 SAPCD1Q5SSQ6 148 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 LINC00479Q96M42 142 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 Q9HAA7 133 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 FAT1Q14517 4588 aa8.71□□□□□ -1.02
FN1-226ENST00000496542 CTXND1A0A1B0GTU2 59 aa8.7□□□□□ -1.02
FN1-226ENST00000496542 MGST1P10620 155 aaKnown RBP8.7□□□□□ -1.02
FN1-226ENST00000496542 XGP55808 180 aa8.7□□□□□ -1.02
FN1-226ENST00000496542 ZNF726P1Q15940 193 aa8.7□□□□□ -1.02
FN1-226ENST00000496542 LELP1Q5T871 98 aa8.7□□□□□ -1.02
FN1-226ENST00000496542 PTH2Q96A98 100 aa8.7□□□□□ -1.02
FN1-226ENST00000496542 ARL2-SNX15V9GYD0 113 aa8.7□□□□□ -1.02
FN1-226ENST00000496542 FLG2Q5D862 2391 aaPredicted RBP8.69□□□□□ -1.02
FN1-226ENST00000496542 IGKV3D-20A0A0C4DH25 116 aa8.69□□□□□ -1.02
FN1-226ENST00000496542 PEX7O00628 323 aa8.69□□□□□ -1.02
FN1-226ENST00000496542 GCSHP23434 173 aa8.69□□□□□ -1.02
FN1-226ENST00000496542 ASIPP42127 132 aa8.69□□□□□ -1.02
FN1-226ENST00000496542 FGF8P55075 233 aaPredicted RBP8.69□□□□□ -1.02
FN1-226ENST00000496542 LGALSLQ3ZCW2 172 aaPredicted RBP8.69□□□□□ -1.02
FN1-226ENST00000496542 AKR1C8PQ5T2L2 129 aa8.69□□□□□ -1.02
FN1-226ENST00000496542 Q86TA4 180 aa8.69□□□□□ -1.02
FN1-226ENST00000496542 OR2T35Q8NGX2 323 aa8.69□□□□□ -1.02
FN1-226ENST00000496542 ATP6V0E2Q8NHE4 81 aa8.69□□□□□ -1.02
FN1-226ENST00000496542 GTSF1LQ9H1H1 148 aa8.69□□□□□ -1.02
FN1-226ENST00000496542 PARLQ9H300 379 aa8.69□□□□□ -1.02
FN1-226ENST00000496542 IBA57-AS1B1ANH7 110 aa8.68□□□□□ -1.02
FN1-226ENST00000496542 Q6ZSN1 163 aa8.68□□□□□ -1.02
FN1-226ENST00000496542 VPS13BQ7Z7G8 4022 aa8.67□□□□□ -1.02
FN1-226ENST00000496542 IGLV5-52A0A0A0MRZ9 124 aa8.67□□□□□ -1.02
FN1-226ENST00000496542 LRCOL1A6NCL2 159 aa8.67□□□□□ -1.02
FN1-226ENST00000496542 GAGE12JA6NER3 117 aa8.67□□□□□ -1.02
FN1-226ENST00000496542 FABP5P3A8MUU1 101 aa8.67□□□□□ -1.02
FN1-226ENST00000496542 A8MWV9 139 aa8.67□□□□□ -1.02
FN1-226ENST00000496542 B4DEV8 164 aa8.67□□□□□ -1.02
FN1-226ENST00000496542 H3BVH4 76 aa8.67□□□□□ -1.02
FN1-226ENST00000496542 GAGE1Q13065 139 aa8.67□□□□□ -1.02
FN1-226ENST00000496542 GAGE4Q13068 117 aa8.67□□□□□ -1.02
FN1-226ENST00000496542 GAGE5Q13069 117 aa8.67□□□□□ -1.02
FN1-226ENST00000496542 GAGE13Q4V321 117 aa8.67□□□□□ -1.02
FN1-226ENST00000496542 Q5VSD8 79 aa8.67□□□□□ -1.02
FN1-226ENST00000496542 JPT2Q9H910 190 aa8.67□□□□□ -1.02
FN1-226ENST00000496542 MAP1LC3B2A6NCE7 125 aa8.66□□□□□ -1.02
FN1-226ENST00000496542 FAM74A7A6NL05 159 aa8.66□□□□□ -1.02
FN1-226ENST00000496542 M0R036 132 aa8.66□□□□□ -1.02
FN1-226ENST00000496542 HAMPP81172 84 aa8.66□□□□□ -1.02
FN1-226ENST00000496542 ZFP2Q6ZN57 461 aa8.66□□□□□ -1.02
FN1-226ENST00000496542 Q8N3U1 123 aa8.66□□□□□ -1.02
FN1-226ENST00000496542 FRZBQ92765 325 aa8.66□□□□□ -1.02
FN1-226ENST00000496542 ZC2HC1AQ96GY0 325 aa8.66□□□□□ -1.02
FN1-226ENST00000496542 MAP1LC3BQ9GZQ8 125 aa8.66□□□□□ -1.02
FN1-226ENST00000496542 SRRM2Q9UQ35 2752 aaKnown RBP8.65□□□□□ -1.02
FN1-226ENST00000496542 GRIFINA4D1Z8 144 aa8.65□□□□□ -1.02
FN1-226ENST00000496542 INAFM2P0DMQ5 153 aa8.65□□□□□ -1.02
FN1-226ENST00000496542 LINC00694P0DN24 101 aa8.65□□□□□ -1.02
FN1-226ENST00000496542 PIK3CD-AS1Q5SR53 167 aa8.65□□□□□ -1.02
FN1-226ENST00000496542 C14orf178Q8N769 122 aaPredicted RBP8.65□□□□□ -1.02
FN1-226ENST00000496542 NTN5Q8WTR8 489 aaPredicted RBP8.65□□□□□ -1.02
FN1-226ENST00000496542 HIST1H2BAQ96A08 127 aa8.65□□□□□ -1.02
FN1-226ENST00000496542 SAMD10Q9BYL1 202 aa8.65□□□□□ -1.02
FN1-226ENST00000496542 NKX6-2Q9C056 277 aaPredicted RBP8.65□□□□□ -1.02
FN1-226ENST00000496542 IL36BQ9NZH7 164 aa8.65□□□□□ -1.02
FN1-226ENST00000496542 KRBOX1C9JBD0 128 aa8.64□□□□□ -1.03
FN1-226ENST00000496542 G3V3Q6 166 aa8.64□□□□□ -1.03
FN1-226ENST00000496542 ARPC5O15511 151 aa8.64□□□□□ -1.03
FN1-226ENST00000496542 SH2D1AO60880 128 aa8.64□□□□□ -1.03
FN1-226ENST00000496542 SMR3BP02814 79 aaPredicted RBP8.64□□□□□ -1.03
FN1-226ENST00000496542 UBE2G1P62253 170 aa8.64□□□□□ -1.03
FN1-226ENST00000496542 LAGE3Q14657 143 aa8.64□□□□□ -1.03
FN1-226ENST00000496542 FAM162BQ5T6X4 162 aa8.64□□□□□ -1.03
FN1-226ENST00000496542 FAM74A4Q5TZK3 123 aa8.64□□□□□ -1.03
FN1-226ENST00000496542 UFSP1Q6NVU6 142 aa8.64□□□□□ -1.03
FN1-226ENST00000496542 Q8N814 137 aa8.64□□□□□ -1.03
FN1-226ENST00000496542 SYT8Q8NBV8 401 aa8.64□□□□□ -1.03
FN1-226ENST00000496542 OR11H4Q8NGC9 324 aa8.64□□□□□ -1.03
FN1-226ENST00000496542 Q9UF83 564 aa8.64□□□□□ -1.03
FN1-226ENST00000496542 HERC1Q15751 4861 aa8.63□□□□□ -1.03
FN1-226ENST00000496542 TMSB15BA0A087X1C1 80 aa8.63□□□□□ -1.03
FN1-226ENST00000496542 RHODO00212 210 aa8.63□□□□□ -1.03
FN1-226ENST00000496542 ARMS2P0C7Q2 107 aa8.63□□□□□ -1.03
FN1-226ENST00000496542 CRIP1P50238 77 aa8.63□□□□□ -1.03
FN1-226ENST00000496542 CST9LP1Q5W188 147 aa8.63□□□□□ -1.03
FN1-226ENST00000496542 FMC1Q96HJ9 113 aa8.63□□□□□ -1.03
FN1-226ENST00000496542 TM2D2Q9BX73 214 aa8.63□□□□□ -1.03
FN1-226ENST00000496542 ZFP30Q9Y2G7 519 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms