RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 PHLDA1Q8WV24 401 aaPredicted RBP5.88□□□□□ -1.47
SMARCD3-215ENST00000496530 BORCS7Q96B45 105 aa5.88□□□□□ -1.47
SMARCD3-215ENST00000496530 NOP10Q9NPE3 64 aaKnown RBP5.88□□□□□ -1.47
SMARCD3-215ENST00000496530 PHLDA3Q9Y5J5 127 aa5.88□□□□□ -1.47
SMARCD3-215ENST00000496530 ATP6V1G1O75348 118 aa5.87□□□□□ -1.47
SMARCD3-215ENST00000496530 TYMSP04818 313 aa5.87□□□□□ -1.47
SMARCD3-215ENST00000496530 DEFB130BP0DP73 79 aa5.87□□□□□ -1.47
SMARCD3-215ENST00000496530 DEFB130AP0DP74 79 aa5.87□□□□□ -1.47
SMARCD3-215ENST00000496530 S100PP25815 95 aa5.87□□□□□ -1.47
SMARCD3-215ENST00000496530 TCTAP57738 103 aa5.87□□□□□ -1.47
SMARCD3-215ENST00000496530 NANOS2P60321 138 aaKnown RBP5.87□□□□□ -1.47
SMARCD3-215ENST00000496530 ZNF415Q09FC8 603 aa5.87□□□□□ -1.47
SMARCD3-215ENST00000496530 LINC01559Q495D7 138 aa5.87□□□□□ -1.47
SMARCD3-215ENST00000496530 SPANXN1Q5VSR9 72 aa5.87□□□□□ -1.47
SMARCD3-215ENST00000496530 FER1L6-AS1Q8NA97 138 aa5.87□□□□□ -1.47
SMARCD3-215ENST00000496530 CTDSP1Q9GZU7 261 aa5.87□□□□□ -1.47
SMARCD3-215ENST00000496530 URGCP-MRPS24S4R325 110 aa5.87□□□□□ -1.47
SMARCD3-215ENST00000496530 TGP01266 2768 aa5.87□□□□□ -1.47
SMARCD3-215ENST00000496530 TRGV1A0A0A0MS02 117 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 TRAV10A0A0B4J240 114 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 IGHV3-16A0A0C4DH30 117 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 GAGE12BA1L429 117 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 H3BVH4 76 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 M0R381 172 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 GAGE7O76087 117 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 GAGE12FP0CL80 117 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 GAGE12GP0CL81 117 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 GAGE12IP0CL82 117 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 RHEBQ15382 184 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 TWIST1Q15672 202 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 KCNIP4Q6PIL6 250 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 ATRAIDQ6UW56 229 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 ZNF493Q6ZR52 646 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 TSKUQ8WUA8 353 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 C16orf74Q96GX8 76 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 SPXQ9BT56 116 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 IL36BQ9NZH7 164 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 V9GYV3 84 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 NBEAL2Q6ZNJ1 2754 aa5.86□□□□□ -1.47
SMARCD3-215ENST00000496530 A0A1W2PPQ1 181 aa5.85□□□□□ -1.47
SMARCD3-215ENST00000496530 HIGD1CA8MV81 97 aa5.85□□□□□ -1.47
SMARCD3-215ENST00000496530 F2Z2F3 143 aa5.85□□□□□ -1.47
SMARCD3-215ENST00000496530 NTF3P20783 257 aa5.85□□□□□ -1.47
SMARCD3-215ENST00000496530 RAB4BP61018 213 aa5.85□□□□□ -1.47
SMARCD3-215ENST00000496530 DAD1P61803 113 aa5.85□□□□□ -1.47
SMARCD3-215ENST00000496530 ZNF876PQ49A33 203 aa5.85□□□□□ -1.47
SMARCD3-215ENST00000496530 SYT8Q8NBV8 401 aa5.85□□□□□ -1.47
SMARCD3-215ENST00000496530 LINC00467Q9BRT7 94 aa5.85□□□□□ -1.47
SMARCD3-215ENST00000496530 MRPL16Q9NX20 251 aaKnown RBP5.85□□□□□ -1.47
SMARCD3-215ENST00000496530 NAT8BQ9UHF3 227 aa5.85□□□□□ -1.47
SMARCD3-215ENST00000496530 DNAH9Q9NYC9 4486 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 TRGV2A0A075B6R0 118 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 DEFB131BA0A096LNP1 70 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 LCE6AA0A183 80 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 SMIM27A0A1W2PRY6 76 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 LYRM9A8MSI8 78 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 IGLL5B9A064 214 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 F5H697 171 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 M0R2P5 195 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 SCO1O75880 301 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 SMIM17P0DL12 118 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 HTN3P15516 51 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 CAMPP49913 170 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 RIGQ13278 110 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 TDRG1Q3Y452 100 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 FAM222AQ5U5X8 452 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 MRPL54Q6P161 138 aaKnown RBP5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 TMEM88Q6PEY1 159 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 Q6ZTC4 211 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 SMIM15Q7Z3B0 74 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 NUP35Q8NFH5 326 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 TMEM263Q8WUH6 116 aaKnown RBP5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 GTSF1Q8WW33 167 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 SMCO4Q9NRQ5 59 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 MSRB1Q9NZV6 116 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 DKK2Q9UBU2 259 aa5.84□□□□□ -1.47
SMARCD3-215ENST00000496530 A0A087WWC5 75 aa5.83□□□□□ -1.48
SMARCD3-215ENST00000496530 IGHV3-73A0A0B4J1V6 119 aa5.83□□□□□ -1.48
SMARCD3-215ENST00000496530 A0A1B0GUT8 65 aa5.83□□□□□ -1.48
SMARCD3-215ENST00000496530 LY6G6CO95867 125 aa5.83□□□□□ -1.48
SMARCD3-215ENST00000496530 IGHV3-53P01767 116 aa5.83□□□□□ -1.48
SMARCD3-215ENST00000496530 RNASE3P12724 160 aaKnown RBP5.83□□□□□ -1.48
SMARCD3-215ENST00000496530 CACNG7P62955 275 aa5.83□□□□□ -1.48
SMARCD3-215ENST00000496530 Q6ZTI0 123 aa5.83□□□□□ -1.48
SMARCD3-215ENST00000496530 ZNF575Q86XF7 245 aa5.83□□□□□ -1.48
SMARCD3-215ENST00000496530 OR4C5Q8NGB2 326 aa5.83□□□□□ -1.48
SMARCD3-215ENST00000496530 JPT2Q9H910 190 aa5.83□□□□□ -1.48
SMARCD3-215ENST00000496530 CELA1Q9UNI1 258 aa5.83□□□□□ -1.48
SMARCD3-215ENST00000496530 C12orf74Q32Q52 190 aa5.82□□□□□ -1.48
SMARCD3-215ENST00000496530 CT83Q5H943 113 aa5.82□□□□□ -1.48
SMARCD3-215ENST00000496530 DNLZQ5SXM8 178 aa5.82□□□□□ -1.48
SMARCD3-215ENST00000496530 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
SMARCD3-215ENST00000496530 ZFP82Q8N141 532 aa5.82□□□□□ -1.48
SMARCD3-215ENST00000496530 C14orf178Q8N769 122 aaPredicted RBP5.82□□□□□ -1.48
SMARCD3-215ENST00000496530 C11orf72Q8NBR9 251 aa5.82□□□□□ -1.48
SMARCD3-215ENST00000496530 OR10AG1Q8NH19 301 aa5.82□□□□□ -1.48
SMARCD3-215ENST00000496530 RNASE8Q8TDE3 154 aaKnown RBP5.82□□□□□ -1.48
SMARCD3-215ENST00000496530 FAM210BQ96KR6 192 aa5.82□□□□□ -1.48
SMARCD3-215ENST00000496530 NDUFAF3Q9BU61 184 aa5.82□□□□□ -1.48
SMARCD3-215ENST00000496530 GFRA4Q9GZZ7 299 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms