RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 HTN1P15515 57 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 EVI2AP22794 236 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 HIST1H2BOP23527 126 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 HIST1H2BBP33778 126 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 G6PCP35575 357 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 HIST1H2BDP58876 126 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 HIST1H2BCP62807 126 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 HIST2H2BEQ16778 126 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 SPINK13Q1W4C9 94 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 RPL7L1Q6DKI1 246 aaKnown RBP6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 HOGA1Q86XE5 327 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 HIST1H2BHQ93079 126 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 HIST1H2BNQ99877 126 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 HIST1H2BMQ99879 126 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 EIF5A2Q9GZV4 153 aaKnown RBP6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 SLC25A31Q9H0C2 315 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 TRAV30A0A087WSZ9 112 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 K7EPK0 472 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 M0R2Z0 102 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 BUB3O43684 328 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 OPRK1P41145 380 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 RPL37AP61513 92 aaKnown RBP6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 IL15RAQ13261 267 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 ARL6IP1Q15041 203 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 ATP6V1FQ16864 119 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 TIGITQ495A1 244 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 TMEM144Q7Z5S9 345 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 LINC01561Q8N1V8 128 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 OR4X1Q8NH49 305 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 Q8WTZ3 238 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 LINC01587Q99440 93 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 LINC00467Q9BRT7 94 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 KRTAP3-1Q9BYR8 98 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 Q9HAA7 133 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 ANAPC10Q9UM13 185 aa6.41□□□□□ -1.38
SMARCAL1-213ENST00000496037 TMEM235A6NFC5 223 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 SNURFLB1AK76 121 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 PHOX2AO14813 284 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 PPYP01298 95 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 IGKV1-17P01599 117 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 IL4P05112 153 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 FABP4P15090 132 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 ZNF25P17030 456 aaPredicted RBP6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 AKR1C4P17516 323 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 RPL12P30050 165 aaKnown RBP6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 FCGR2CP31995 323 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 AMTP48728 403 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 FXYD4P59646 89 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 LAGE3Q14657 143 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 ELOBQ15370 118 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 COA6Q5JTJ3 125 aaKnown RBP6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 LELP1Q5T871 98 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 ZNF493Q6ZR52 646 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 TMEM183AQ8IXX5 376 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 TMEM256Q8N2U0 113 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 TVP23CQ96ET8 276 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 HIST1H2BLQ99880 126 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 RSG1Q9BU20 258 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 RPRMQ9NS64 109 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 TMEM242Q9NWH2 141 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 OR5AC2Q9NZP5 309 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 ANXA10Q9UJ72 324 aa6.4□□□□□ -1.38
SMARCAL1-213ENST00000496037 A0A0U1RQV1 116 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 M0QXV9 152 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 ISLRO14498 428 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 CRXO43186 299 aaPredicted RBP6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 F2RP25116 425 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 G0S2P27469 103 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 RND2P52198 227 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 SUB1P53999 127 aaKnown RBP eCLIP6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 S100A10P60903 97 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 IQCJQ1A5X6 159 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 ACOT6Q3I5F7 207 aaPredicted RBP6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 AMTNQ6UX39 209 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 ZNF818PQ6ZRF7 136 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 MTURNQ8N3F0 131 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 C10orf126Q8N4M7 172 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 OR10G4Q8NGN3 311 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 TMEM263Q8WUH6 116 aaKnown RBP6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 BAALCQ8WXS3 180 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 GPR146Q96CH1 333 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 MRPL36Q9P0J6 103 aaKnown RBP6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 VAX2Q9UIW0 290 aa6.39□□□□□ -1.39
SMARCAL1-213ENST00000496037 TRBV24-1A0A075B6N3 115 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 TRAV12-2A0A075B6T6 113 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 TRAV5A0A0B4J249 113 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 A8MTW9 85 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 H3BQ15 152 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 DUSP14O95147 198 aaKnown RBP6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 IGLV2-8P01709 118 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 TRGC1P0CF51 173 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 GZMBP10144 247 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 HNRNPA3P51991 378 aaKnown RBP6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 COX19Q49B96 90 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 SAMD13Q5VXD3 122 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 ZNF664Q8N3J9 261 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 ACY3Q96HD9 319 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 VSIG2Q96IQ7 327 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 CHAC1Q9BUX1 264 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms