RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 EVI2AP22794 236 aa16.5■□□□□ 0.23
HLA-C-209ENST00000495835 Q86TA4 180 aa16.5■□□□□ 0.23
HLA-C-209ENST00000495835 FMC1Q96HJ9 113 aa16.5■□□□□ 0.23
HLA-C-209ENST00000495835 PRADC1Q9BSG0 188 aa16.5■□□□□ 0.23
HLA-C-209ENST00000495835 IGKV3D-20A0A0C4DH25 116 aa16.49■□□□□ 0.23
HLA-C-209ENST00000495835 TRBV6-1A0A0K0K1D8 114 aa16.49■□□□□ 0.23
HLA-C-209ENST00000495835 PGPEP1LA6NFU8 196 aa16.49■□□□□ 0.23
HLA-C-209ENST00000495835 RHOHQ15669 191 aa16.49■□□□□ 0.23
HLA-C-209ENST00000495835 ZNF506Q5JVG8 444 aa16.49■□□□□ 0.23
HLA-C-209ENST00000495835 DPPA3Q6W0C5 159 aa16.49■□□□□ 0.23
HLA-C-209ENST00000495835 SPATA12Q7Z6I5 190 aa16.49■□□□□ 0.23
HLA-C-209ENST00000495835 SLC25A29Q8N8R3 303 aa16.49■□□□□ 0.23
HLA-C-209ENST00000495835 MGST1P10620 155 aaKnown RBP16.48■□□□□ 0.23
HLA-C-209ENST00000495835 S100A4P26447 101 aaKnown RBP16.48■□□□□ 0.23
HLA-C-209ENST00000495835 DNLZQ5SXM8 178 aa16.48■□□□□ 0.23
HLA-C-209ENST00000495835 ZFP2Q6ZN57 461 aa16.48■□□□□ 0.23
HLA-C-209ENST00000495835 A8MWV9 139 aa16.47■□□□□ 0.23
HLA-C-209ENST00000495835 SMLR1H3BR10 107 aa16.47■□□□□ 0.23
HLA-C-209ENST00000495835 ASIPP42127 132 aa16.47■□□□□ 0.23
HLA-C-209ENST00000495835 UBE2G1P62253 170 aa16.47■□□□□ 0.23
HLA-C-209ENST00000495835 WFDC10BQ8IUB3 73 aa16.47■□□□□ 0.23
HLA-C-209ENST00000495835 C10orf126Q8N4M7 172 aa16.47■□□□□ 0.23
HLA-C-209ENST00000495835 NHLRC2Q8NBF2 726 aa16.47■□□□□ 0.23
HLA-C-209ENST00000495835 MBD3L1Q8WWY6 194 aa16.47■□□□□ 0.23
HLA-C-209ENST00000495835 IL36BQ9NZH7 164 aa16.47■□□□□ 0.23
HLA-C-209ENST00000495835 LOC100131303A0A0U1RQF7 123 aa16.46■□□□□ 0.23
HLA-C-209ENST00000495835 EIF5AP63241 154 aaKnown RBP16.46■□□□□ 0.23
HLA-C-209ENST00000495835 KRTAP17-1Q9BYP8 105 aa16.45■□□□□ 0.22
HLA-C-209ENST00000495835 KANTRA0A1W2PQU2 76 aa16.44■□□□□ 0.22
HLA-C-209ENST00000495835 B4DEV8 164 aa16.44■□□□□ 0.22
HLA-C-209ENST00000495835 EREGO14944 169 aa16.44■□□□□ 0.22
HLA-C-209ENST00000495835 CST9LP1Q5W188 147 aa16.44■□□□□ 0.22
HLA-C-209ENST00000495835 OR11H4Q8NGC9 324 aa16.44■□□□□ 0.22
HLA-C-209ENST00000495835 ZC2HC1AQ96GY0 325 aa16.44■□□□□ 0.22
HLA-C-209ENST00000495835 HSPG2P98160 4391 aa16.44■□□□□ 0.22
HLA-C-209ENST00000495835 BCL2L11O43521 198 aa16.43■□□□□ 0.22
HLA-C-209ENST00000495835 LTAP01374 205 aa16.43■□□□□ 0.22
HLA-C-209ENST00000495835 S100A9P06702 114 aaKnown RBP16.43■□□□□ 0.22
HLA-C-209ENST00000495835 CRIP1P50238 77 aa16.43■□□□□ 0.22
HLA-C-209ENST00000495835 ERVFC1-1P60608 527 aa16.43■□□□□ 0.22
HLA-C-209ENST00000495835 FAM162BQ5T6X4 162 aa16.43■□□□□ 0.22
HLA-C-209ENST00000495835 ZNF471Q9BX82 626 aaPredicted RBP16.43■□□□□ 0.22
HLA-C-209ENST00000495835 PGPEP1Q9NXJ5 209 aa16.43■□□□□ 0.22
HLA-C-209ENST00000495835 MSRB1Q9NZV6 116 aa16.43■□□□□ 0.22
HLA-C-209ENST00000495835 DNAH5Q8TE73 4624 aa16.42■□□□□ 0.22
HLA-C-209ENST00000495835 KRBOX1C9JBD0 128 aa16.42■□□□□ 0.22
HLA-C-209ENST00000495835 ZNF674Q2M3X9 581 aa16.42■□□□□ 0.22
HLA-C-209ENST00000495835 LGALSLQ3ZCW2 172 aaPredicted RBP16.42■□□□□ 0.22
HLA-C-209ENST00000495835 SFT2D1Q8WV19 159 aa16.42■□□□□ 0.22
HLA-C-209ENST00000495835 PARLQ9H300 379 aa16.42■□□□□ 0.22
HLA-C-209ENST00000495835 TRAV8-6A0A0B4J262 113 aa16.41■□□□□ 0.22
HLA-C-209ENST00000495835 IGHV3-38A0A0C4DH36 116 aa16.41■□□□□ 0.22
HLA-C-209ENST00000495835 KRTAP10-2P60368 255 aa16.41■□□□□ 0.22
HLA-C-209ENST00000495835 SYT8Q8NBV8 401 aa16.41■□□□□ 0.22
HLA-C-209ENST00000495835 IGHV3-73A0A0B4J1V6 119 aa16.4■□□□□ 0.22
HLA-C-209ENST00000495835 PAGE4O60829 102 aa16.4■□□□□ 0.22
HLA-C-209ENST00000495835 SH2D1AO60880 128 aa16.4■□□□□ 0.22
HLA-C-209ENST00000495835 CRYGDP07320 174 aa16.4■□□□□ 0.22
HLA-C-209ENST00000495835 LINC01556Q5JQF7 62 aa16.4■□□□□ 0.22
HLA-C-209ENST00000495835 FAM213BQ8TBF2 198 aa16.4■□□□□ 0.22
HLA-C-209ENST00000495835 ARMS2P0C7Q2 107 aa16.39■□□□□ 0.21
HLA-C-209ENST00000495835 AKR1C3P42330 323 aa16.39■□□□□ 0.21
HLA-C-209ENST00000495835 LINC01559Q495D7 138 aa16.39■□□□□ 0.21
HLA-C-209ENST00000495835 LELP1Q5T871 98 aa16.39■□□□□ 0.21
HLA-C-209ENST00000495835 ATP6V0E2Q8NHE4 81 aa16.39■□□□□ 0.21
HLA-C-209ENST00000495835 GTSF1LQ9H1H1 148 aa16.39■□□□□ 0.21
HLA-C-209ENST00000495835 TNFRSF18Q9Y5U5 241 aa16.39■□□□□ 0.21
HLA-C-209ENST00000495835 RHODO00212 210 aa16.38■□□□□ 0.21
HLA-C-209ENST00000495835 CDPF1Q6NVV7 123 aa16.38■□□□□ 0.21
HLA-C-209ENST00000495835 APOBP04114 4563 aaKnown RBP16.38■□□□□ 0.21
HLA-C-209ENST00000495835 H2AFB1P0C5Y9 115 aa16.37■□□□□ 0.21
HLA-C-209ENST00000495835 TPT1P13693 172 aaKnown RBP16.37■□□□□ 0.21
HLA-C-209ENST00000495835 UFSP1Q6NVU6 142 aa16.37■□□□□ 0.21
HLA-C-209ENST00000495835 SCRT2Q9NQ03 307 aa16.37■□□□□ 0.21
HLA-C-209ENST00000495835 H3BVH4 76 aa16.36■□□□□ 0.21
HLA-C-209ENST00000495835 M0R036 132 aa16.36■□□□□ 0.21
HLA-C-209ENST00000495835 PFDN1O60925 122 aa16.36■□□□□ 0.21
HLA-C-209ENST00000495835 OR10J3Q5JRS4 329 aa16.36■□□□□ 0.21
HLA-C-209ENST00000495835 DMRTA1Q5VZB9 504 aa16.36■□□□□ 0.21
HLA-C-209ENST00000495835 TMUB2Q71RG4 321 aa16.36■□□□□ 0.21
HLA-C-209ENST00000495835 PHLDA3Q9Y5J5 127 aa16.35■□□□□ 0.21
HLA-C-209ENST00000495835 A0A087WTM6 91 aa16.34■□□□□ 0.21
HLA-C-209ENST00000495835 IBA57-AS1B1ANH7 110 aa16.34■□□□□ 0.21
HLA-C-209ENST00000495835 Q6ZSN1 163 aa16.34■□□□□ 0.21
HLA-C-209ENST00000495835 GRIFINA4D1Z8 144 aa16.33■□□□□ 0.2
HLA-C-209ENST00000495835 LINC00694P0DN24 101 aa16.33■□□□□ 0.2
HLA-C-209ENST00000495835 RAB5CP51148 216 aa16.33■□□□□ 0.2
HLA-C-209ENST00000495835 EIF5AL1Q6IS14 154 aaKnown RBP16.33■□□□□ 0.2
HLA-C-209ENST00000495835 SFRP2Q96HF1 295 aa16.33■□□□□ 0.2
HLA-C-209ENST00000495835 MLST8Q9BVC4 326 aa16.33■□□□□ 0.2
HLA-C-209ENST00000495835 CXCL1P09341 107 aa16.32■□□□□ 0.2
HLA-C-209ENST00000495835 JPT2Q9H910 190 aa16.32■□□□□ 0.2
HLA-C-209ENST00000495835 A0A087WWC5 75 aa16.31■□□□□ 0.2
HLA-C-209ENST00000495835 TRAV1-1A0A0B4J248 108 aa16.31■□□□□ 0.2
HLA-C-209ENST00000495835 BAGE2Q86Y30 109 aa16.31■□□□□ 0.2
HLA-C-209ENST00000495835 ZFP82Q8N141 532 aa16.31■□□□□ 0.2
HLA-C-209ENST00000495835 SAMD10Q9BYL1 202 aa16.31■□□□□ 0.2
HLA-C-209ENST00000495835 MANBALQ9NQG1 85 aa16.31■□□□□ 0.2
HLA-C-209ENST00000495835 ABCA13Q86UQ4 5058 aa16.3■□□□□ 0.2
HLA-C-209ENST00000495835 SCO2A0A1W2PP80 73 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms