RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 RPH3ALQ9UNE2 315 aa8.66□□□□□ -1.02
COL1A1-209ENST00000495677 OR7C2O60412 319 aa8.65□□□□□ -1.02
COL1A1-209ENST00000495677 Q0VG73 95 aa8.65□□□□□ -1.02
COL1A1-209ENST00000495677 ELOBQ15370 118 aa8.65□□□□□ -1.02
COL1A1-209ENST00000495677 ZNF506Q5JVG8 444 aa8.65□□□□□ -1.02
COL1A1-209ENST00000495677 DGAT2L7PQ6IED9 249 aa8.65□□□□□ -1.02
COL1A1-209ENST00000495677 DNAJC30Q96LL9 226 aa8.65□□□□□ -1.02
COL1A1-209ENST00000495677 KCNIP2Q9NS61 270 aa8.65□□□□□ -1.02
COL1A1-209ENST00000495677 KLK12Q9UKR0 248 aa8.65□□□□□ -1.02
COL1A1-209ENST00000495677 URGCP-MRPS24S4R325 110 aa8.65□□□□□ -1.02
COL1A1-209ENST00000495677 A0A0D9SG52 128 aa8.64□□□□□ -1.03
COL1A1-209ENST00000495677 PGPA6NDG6 321 aa8.64□□□□□ -1.03
COL1A1-209ENST00000495677 GAGE12JA6NER3 117 aa8.64□□□□□ -1.03
COL1A1-209ENST00000495677 GAGE1Q13065 139 aa8.64□□□□□ -1.03
COL1A1-209ENST00000495677 GAGE4Q13068 117 aa8.64□□□□□ -1.03
COL1A1-209ENST00000495677 GAGE5Q13069 117 aa8.64□□□□□ -1.03
COL1A1-209ENST00000495677 RAB32Q13637 225 aa8.64□□□□□ -1.03
COL1A1-209ENST00000495677 GAGE13Q4V321 117 aa8.64□□□□□ -1.03
COL1A1-209ENST00000495677 FAM74A1Q5RGS3 127 aa8.64□□□□□ -1.03
COL1A1-209ENST00000495677 C9orf163Q8N9P6 203 aa8.64□□□□□ -1.03
COL1A1-209ENST00000495677 OTORQ9NRC9 128 aa8.64□□□□□ -1.03
COL1A1-209ENST00000495677 A8MWV9 139 aa8.63□□□□□ -1.03
COL1A1-209ENST00000495677 TAAR5O14804 337 aa8.63□□□□□ -1.03
COL1A1-209ENST00000495677 RNASE3P12724 160 aaKnown RBP8.63□□□□□ -1.03
COL1A1-209ENST00000495677 S100A10P60903 97 aa8.63□□□□□ -1.03
COL1A1-209ENST00000495677 UBE2L3P68036 154 aaKnown RBP8.63□□□□□ -1.03
COL1A1-209ENST00000495677 NHLH2Q02577 135 aa8.63□□□□□ -1.03
COL1A1-209ENST00000495677 CMTM2Q8TAZ6 248 aa8.63□□□□□ -1.03
COL1A1-209ENST00000495677 UBE2WQ96B02 151 aa8.63□□□□□ -1.03
COL1A1-209ENST00000495677 WDR61Q9GZS3 305 aaKnown RBP8.63□□□□□ -1.03
COL1A1-209ENST00000495677 PARLQ9H300 379 aa8.63□□□□□ -1.03
COL1A1-209ENST00000495677 C11orf21Q9P2W6 132 aa8.63□□□□□ -1.03
COL1A1-209ENST00000495677 F6UZH7 168 aa8.62□□□□□ -1.03
COL1A1-209ENST00000495677 INMT-MINDY4F8WBC2 141 aa8.62□□□□□ -1.03
COL1A1-209ENST00000495677 KHDC3LQ587J8 217 aa8.62□□□□□ -1.03
COL1A1-209ENST00000495677 UFSP1Q6NVU6 142 aa8.62□□□□□ -1.03
COL1A1-209ENST00000495677 OR5C1Q8NGR4 320 aa8.62□□□□□ -1.03
COL1A1-209ENST00000495677 THAP6Q8TBB0 222 aa8.62□□□□□ -1.03
COL1A1-209ENST00000495677 HYLS1Q96M11 299 aa8.62□□□□□ -1.03
COL1A1-209ENST00000495677 NMES1Q9C002 83 aa8.62□□□□□ -1.03
COL1A1-209ENST00000495677 Q9UF83 564 aa8.62□□□□□ -1.03
COL1A1-209ENST00000495677 C17orf112F2Z3M2 114 aa8.61□□□□□ -1.03
COL1A1-209ENST00000495677 ASIPP42127 132 aa8.61□□□□□ -1.03
COL1A1-209ENST00000495677 TAS2R45P59539 299 aa8.61□□□□□ -1.03
COL1A1-209ENST00000495677 FFAR4Q5NUL3 377 aa8.61□□□□□ -1.03
COL1A1-209ENST00000495677 GOLT1AQ6ZVE7 132 aa8.61□□□□□ -1.03
COL1A1-209ENST00000495677 HSD17B11Q8NBQ5 300 aa8.61□□□□□ -1.03
COL1A1-209ENST00000495677 SAMD10Q9BYL1 202 aa8.61□□□□□ -1.03
COL1A1-209ENST00000495677 MBD2Q9UBB5 411 aa8.61□□□□□ -1.03
COL1A1-209ENST00000495677 A0A087WX48 190 aa8.6□□□□□ -1.03
COL1A1-209ENST00000495677 SERTM2A0A1B0GWG4 89 aa8.6□□□□□ -1.03
COL1A1-209ENST00000495677 SSNA1O43805 119 aa8.6□□□□□ -1.03
COL1A1-209ENST00000495677 SIX6O95475 246 aa8.6□□□□□ -1.03
COL1A1-209ENST00000495677 ZNF80P51504 273 aaPredicted RBP8.6□□□□□ -1.03
COL1A1-209ENST00000495677 CIRBPQ14011 172 aaKnown RBP8.6□□□□□ -1.03
COL1A1-209ENST00000495677 SDIM1Q6ZPB5 146 aa8.6□□□□□ -1.03
COL1A1-209ENST00000495677 OR2T35Q8NGX2 323 aa8.6□□□□□ -1.03
COL1A1-209ENST00000495677 C1orf43Q9BWL3 253 aa8.6□□□□□ -1.03
COL1A1-209ENST00000495677 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.6□□□□□ -1.03
COL1A1-209ENST00000495677 RPL19P84098 196 aaKnown RBP8.59□□□□□ -1.03
COL1A1-209ENST00000495677 ENHOQ6UWT2 76 aa8.59□□□□□ -1.03
COL1A1-209ENST00000495677 NDFIP1Q9BT67 221 aa8.59□□□□□ -1.03
COL1A1-209ENST00000495677 OR5AC2Q9NZP5 309 aa8.59□□□□□ -1.03
COL1A1-209ENST00000495677 LRRC37A5PQ49AS3 106 aa8.58□□□□□ -1.04
COL1A1-209ENST00000495677 KCNIP4Q6PIL6 250 aa8.58□□□□□ -1.04
COL1A1-209ENST00000495677 PQLC2Q6ZP29 291 aa8.58□□□□□ -1.04
COL1A1-209ENST00000495677 C14orf178Q8N769 122 aaPredicted RBP8.58□□□□□ -1.04
COL1A1-209ENST00000495677 OR10G7Q8NGN6 311 aa8.58□□□□□ -1.04
COL1A1-209ENST00000495677 LINC01600Q96MT4 127 aa8.58□□□□□ -1.04
COL1A1-209ENST00000495677 USP17L23D6RBM5 183 aa8.57□□□□□ -1.04
COL1A1-209ENST00000495677 PANO1I0J062 215 aa8.57□□□□□ -1.04
COL1A1-209ENST00000495677 PTTG1O95997 202 aa8.57□□□□□ -1.04
COL1A1-209ENST00000495677 PRSS1P07477 247 aa8.57□□□□□ -1.04
COL1A1-209ENST00000495677 DMRTA1Q5VZB9 504 aa8.57□□□□□ -1.04
COL1A1-209ENST00000495677 ZC2HC1AQ96GY0 325 aa8.57□□□□□ -1.04
COL1A1-209ENST00000495677 MARVELD1Q9BSK0 173 aa8.57□□□□□ -1.04
COL1A1-209ENST00000495677 RHODO00212 210 aa8.56□□□□□ -1.04
COL1A1-209ENST00000495677 GCGP01275 180 aa8.56□□□□□ -1.04
COL1A1-209ENST00000495677 LGALSLQ3ZCW2 172 aaPredicted RBP8.56□□□□□ -1.04
COL1A1-209ENST00000495677 TMEM75Q8N9X5 138 aa8.56□□□□□ -1.04
COL1A1-209ENST00000495677 RNF185Q96GF1 192 aa8.56□□□□□ -1.04
COL1A1-209ENST00000495677 ALG5Q9Y673 324 aa8.56□□□□□ -1.04
COL1A1-209ENST00000495677 SMUG1Q53HV7 270 aa8.55□□□□□ -1.04
COL1A1-209ENST00000495677 OR2G3Q8NGZ4 309 aa8.55□□□□□ -1.04
COL1A1-209ENST00000495677 JPT2Q9H910 190 aa8.55□□□□□ -1.04
COL1A1-209ENST00000495677 IL36BQ9NZH7 164 aa8.55□□□□□ -1.04
COL1A1-209ENST00000495677 IGKV3D-20A0A0C4DH25 116 aa8.54□□□□□ -1.04
COL1A1-209ENST00000495677 TRBV10-1A0A0K0K1A3 114 aa8.54□□□□□ -1.04
COL1A1-209ENST00000495677 GNG5P63218 68 aa8.54□□□□□ -1.04
COL1A1-209ENST00000495677 MIAQ16674 131 aa8.54□□□□□ -1.04
COL1A1-209ENST00000495677 DNLZQ5SXM8 178 aa8.54□□□□□ -1.04
COL1A1-209ENST00000495677 CLRN3Q8NCR9 226 aa8.54□□□□□ -1.04
COL1A1-209ENST00000495677 SGK494Q96LW2 274 aa8.54□□□□□ -1.04
COL1A1-209ENST00000495677 DPH3P1Q9H4G8 78 aa8.54□□□□□ -1.04
COL1A1-209ENST00000495677 PSG8Q9UQ74 426 aa8.54□□□□□ -1.04
COL1A1-209ENST00000495677 K7EQM0 130 aa8.53□□□□□ -1.04
COL1A1-209ENST00000495677 CRPP02741 224 aa8.53□□□□□ -1.04
COL1A1-209ENST00000495677 TCRAP04437 139 aa8.53□□□□□ -1.04
COL1A1-209ENST00000495677 S100A4P26447 101 aaKnown RBP8.53□□□□□ -1.04
COL1A1-209ENST00000495677 RGS21Q2M5E4 152 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms