RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	DCANP1	Q8TF63	244 aa		11.54	□□□□□ -0.56
CALD1-222	ENST00000495522	C10orf99	Q6UWK7	81 aa		11.54	□□□□□ -0.56
CALD1-222	ENST00000495522	ERAS	Q7Z444	233 aa		11.54	□□□□□ -0.56
CALD1-222	ENST00000495522	MAPK1IP1L	Q8NDC0	245 aa		11.54	□□□□□ -0.56
CALD1-222	ENST00000495522	OR9G4	Q8NGQ1	327 aa		11.54	□□□□□ -0.56
CALD1-222	ENST00000495522	SMIM2	Q9BVW6	85 aa		11.54	□□□□□ -0.56
CALD1-222	ENST00000495522	KLLN	B2CW77	178 aa		11.53	□□□□□ -0.56
CALD1-222	ENST00000495522	GNRH2	O43555	120 aa		11.53	□□□□□ -0.56
CALD1-222	ENST00000495522	MYOZ3	Q8TDC0	251 aa		11.53	□□□□□ -0.56
CALD1-222	ENST00000495522	FOXC2	Q99958	501 aa		11.53	□□□□□ -0.56
CALD1-222	ENST00000495522	SIVA1	O15304	175 aa		11.52	□□□□□ -0.56
CALD1-222	ENST00000495522	SPRY2	O43597	315 aa		11.52	□□□□□ -0.56
CALD1-222	ENST00000495522	TCTA	P57738	103 aa		11.52	□□□□□ -0.56
CALD1-222	ENST00000495522	TMEM97	Q5BJF2	176 aa		11.52	□□□□□ -0.56
CALD1-222	ENST00000495522	C14orf178	Q8N769	122 aa	Predicted RBP	11.52	□□□□□ -0.56
CALD1-222	ENST00000495522	VPREB3	Q9UKI3	123 aa		11.52	□□□□□ -0.56
CALD1-222	ENST00000495522	IGKC	P01834	107 aa		11.52	□□□□□ -0.57
CALD1-222	ENST00000495522	RNASE3	P12724	160 aa	Known RBP	11.52	□□□□□ -0.57
CALD1-222	ENST00000495522	NMU	P48645	174 aa		11.52	□□□□□ -0.57
CALD1-222	ENST00000495522	AP1S3	Q96PC3	154 aa		11.52	□□□□□ -0.57
CALD1-222	ENST00000495522	CSPG4	Q6UVK1	2322 aa		11.52	□□□□□ -0.57
CALD1-222	ENST00000495522		A1L4Q6	167 aa		11.51	□□□□□ -0.57
CALD1-222	ENST00000495522		Q5PR19	223 aa		11.51	□□□□□ -0.57
CALD1-222	ENST00000495522	RASL10A	Q92737	203 aa		11.51	□□□□□ -0.57
CALD1-222	ENST00000495522	C20orf78	Q9BR46	151 aa		11.51	□□□□□ -0.57
CALD1-222	ENST00000495522	RNF223	E7ERA6	249 aa		11.51	□□□□□ -0.57
CALD1-222	ENST00000495522	DPM2	O94777	84 aa		11.51	□□□□□ -0.57
CALD1-222	ENST00000495522	NXPH4	O95158	308 aa		11.51	□□□□□ -0.57
CALD1-222	ENST00000495522	PLA2G2A	P14555	144 aa		11.51	□□□□□ -0.57
CALD1-222	ENST00000495522	SUMO2	P61956	95 aa	Known RBP	11.51	□□□□□ -0.57
CALD1-222	ENST00000495522	SEC11A	P67812	179 aa		11.51	□□□□□ -0.57
CALD1-222	ENST00000495522	AMMECR1L	Q6DCA0	310 aa		11.51	□□□□□ -0.57
CALD1-222	ENST00000495522	HHLA3	Q9XRX5	114 aa		11.51	□□□□□ -0.57
CALD1-222	ENST00000495522	FSHB	P01225	129 aa		11.5	□□□□□ -0.57
CALD1-222	ENST00000495522	FAM159A	Q6UWV7	190 aa		11.5	□□□□□ -0.57
CALD1-222	ENST00000495522	PCP2	Q8IVA1	136 aa		11.5	□□□□□ -0.57
CALD1-222	ENST00000495522	ANKRD17	O75179	2603 aa	Known RBP	11.5	□□□□□ -0.57
CALD1-222	ENST00000495522	MGP	P08493	103 aa		11.5	□□□□□ -0.57
CALD1-222	ENST00000495522	ORMDL2	Q53FV1	153 aa		11.5	□□□□□ -0.57
CALD1-222	ENST00000495522		Q6YL49	198 aa		11.5	□□□□□ -0.57
CALD1-222	ENST00000495522	C7orf71	A4D174	169 aa		11.49	□□□□□ -0.57
CALD1-222	ENST00000495522	ELANE	P08246	267 aa		11.49	□□□□□ -0.57
CALD1-222	ENST00000495522	LGALS1	P09382	135 aa	Known RBP	11.49	□□□□□ -0.57
CALD1-222	ENST00000495522	IGHV4-31	P0DP07	118 aa		11.49	□□□□□ -0.57
CALD1-222	ENST00000495522	ODF3	Q96PU9	254 aa		11.49	□□□□□ -0.57
CALD1-222	ENST00000495522	FBN2	P35556	2912 aa		11.49	□□□□□ -0.57
CALD1-222	ENST00000495522		K7EMI3	77 aa		11.48	□□□□□ -0.57
CALD1-222	ENST00000495522	SAP30	O75446	220 aa		11.48	□□□□□ -0.57
CALD1-222	ENST00000495522	PPP1R17	O96001	155 aa		11.48	□□□□□ -0.57
CALD1-222	ENST00000495522	ZNF688	P0C7X2	276 aa		11.48	□□□□□ -0.57
CALD1-222	ENST00000495522	SNRPD3	P62318	126 aa	Known RBP	11.48	□□□□□ -0.57
CALD1-222	ENST00000495522	HSD52	Q0P140	79 aa		11.48	□□□□□ -0.57
CALD1-222	ENST00000495522	RPL39L	Q96EH5	51 aa	Known RBP	11.48	□□□□□ -0.57
CALD1-222	ENST00000495522	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.48	□□□□□ -0.57
CALD1-222	ENST00000495522		J3QKU1	62 aa		11.48	□□□□□ -0.57
CALD1-222	ENST00000495522	GTF2H5	Q6ZYL4	71 aa		11.48	□□□□□ -0.57
CALD1-222	ENST00000495522	POM121L12	Q8N7R1	296 aa		11.48	□□□□□ -0.57
CALD1-222	ENST00000495522	ZNF702P	Q9H963	129 aa		11.48	□□□□□ -0.57
CALD1-222	ENST00000495522		A0A087WX48	190 aa		11.47	□□□□□ -0.57
CALD1-222	ENST00000495522	LGALS9	O00182	355 aa		11.47	□□□□□ -0.57
CALD1-222	ENST00000495522	SYNJ2BP	P57105	145 aa		11.47	□□□□□ -0.57
CALD1-222	ENST00000495522	ADAMTSL5	Q6ZMM2	481 aa		11.47	□□□□□ -0.57
CALD1-222	ENST00000495522	TRAV12-3	A0A0B4J271	114 aa		11.47	□□□□□ -0.57
CALD1-222	ENST00000495522		K7EQG2	157 aa		11.47	□□□□□ -0.57
CALD1-222	ENST00000495522	TMEM160	Q9NX00	188 aa		11.47	□□□□□ -0.57
CALD1-222	ENST00000495522	MRPL35	Q9NZE8	188 aa	Known RBP	11.47	□□□□□ -0.57
CALD1-222	ENST00000495522	LRRK2	Q5S007	2527 aa		11.46	□□□□□ -0.57
CALD1-222	ENST00000495522	CSMD2	Q7Z408	3487 aa		11.46	□□□□□ -0.57
CALD1-222	ENST00000495522	IGKV2D-26	A0A0A0MRZ7	120 aa		11.46	□□□□□ -0.57
CALD1-222	ENST00000495522		A0A0J9YX75	114 aa		11.46	□□□□□ -0.57
CALD1-222	ENST00000495522		A6NDN8	102 aa		11.46	□□□□□ -0.57
CALD1-222	ENST00000495522	ZC2HC1B	Q5TFG8	222 aa		11.46	□□□□□ -0.57
CALD1-222	ENST00000495522	UFSP1	Q6NVU6	142 aa		11.46	□□□□□ -0.57
CALD1-222	ENST00000495522	NEGR1	Q7Z3B1	354 aa		11.46	□□□□□ -0.57
CALD1-222	ENST00000495522	TOMM6	Q96B49	74 aa		11.46	□□□□□ -0.57
CALD1-222	ENST00000495522	IGHV4OR15-8	A0A075B7B6	117 aa		11.45	□□□□□ -0.58
CALD1-222	ENST00000495522		A0A087WW49	117 aa		11.45	□□□□□ -0.58
CALD1-222	ENST00000495522	CD7	P09564	240 aa		11.45	□□□□□ -0.58
CALD1-222	ENST00000495522	UBE2E2	Q96LR5	201 aa		11.45	□□□□□ -0.58
CALD1-222	ENST00000495522	BEX4	Q9NWD9	120 aa	Predicted RBP	11.45	□□□□□ -0.58
CALD1-222	ENST00000495522	KIF25-AS1	Q9Y6Z4	181 aa		11.45	□□□□□ -0.58
CALD1-222	ENST00000495522	TRAV12-1	A0A0B4J245	112 aa		11.45	□□□□□ -0.58
CALD1-222	ENST00000495522	HOXA3	O43365	443 aa	Predicted RBP	11.45	□□□□□ -0.58
CALD1-222	ENST00000495522	PLN	P26678	52 aa		11.45	□□□□□ -0.58
CALD1-222	ENST00000495522	GTSCR1	Q86UQ5	136 aa		11.45	□□□□□ -0.58
CALD1-222	ENST00000495522	SCGB3A1	Q96QR1	104 aa		11.45	□□□□□ -0.58
CALD1-222	ENST00000495522	USP9Y	O00507	2555 aa	Predicted RBP	11.45	□□□□□ -0.58
CALD1-222	ENST00000495522	HLA-DRB4	P13762	266 aa		11.44	□□□□□ -0.58
CALD1-222	ENST00000495522	HOXD3	P31249	432 aa	Predicted RBP	11.44	□□□□□ -0.58
CALD1-222	ENST00000495522	RNF152	Q8N8N0	203 aa		11.44	□□□□□ -0.58
CALD1-222	ENST00000495522	HLA-DRB4	X5D2U9	266 aa		11.44	□□□□□ -0.58
CALD1-222	ENST00000495522	ZAN	Q9Y493	2812 aa		11.44	□□□□□ -0.58
CALD1-222	ENST00000495522	GAGE10	A6NGK3	116 aa		11.44	□□□□□ -0.58
CALD1-222	ENST00000495522	LINC00315	P59091	139 aa		11.44	□□□□□ -0.58
CALD1-222	ENST00000495522	KRTAP10-9	P60411	292 aa		11.44	□□□□□ -0.58
CALD1-222	ENST00000495522	DEFB113	Q30KQ7	82 aa		11.44	□□□□□ -0.58
CALD1-222	ENST00000495522	HIGD1B	Q9P298	99 aa		11.44	□□□□□ -0.58
CALD1-222	ENST00000495522	MUC4	Q99102	2169 aa		11.43	□□□□□ -0.58
CALD1-222	ENST00000495522		H7C1H1	209 aa		11.43	□□□□□ -0.58
CALD1-222	ENST00000495522	CR1	P17927	2039 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms