RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 OR2D3Q8NGH3 330 aa12.1□□□□□ -0.47
HDAC6-235ENST00000495515 PHLDA3Q9Y5J5 127 aa12.1□□□□□ -0.47
HDAC6-235ENST00000495515 IGLL5B9A064 214 aa12.09□□□□□ -0.47
HDAC6-235ENST00000495515 K7EN84 100 aa12.09□□□□□ -0.47
HDAC6-235ENST00000495515 PIK3CD-AS1Q5SR53 167 aa12.09□□□□□ -0.47
HDAC6-235ENST00000495515 LINC01551Q86U37 167 aa12.09□□□□□ -0.47
HDAC6-235ENST00000495515 NUDT10Q8NFP7 164 aa12.09□□□□□ -0.47
HDAC6-235ENST00000495515 NUDT11Q96G61 164 aa12.09□□□□□ -0.47
HDAC6-235ENST00000495515 NAT8Q9UHE5 227 aa12.09□□□□□ -0.47
HDAC6-235ENST00000495515 UQCC3Q6UW78 93 aa12.08□□□□□ -0.48
HDAC6-235ENST00000495515 FAM231DQ6ZW35 169 aa12.08□□□□□ -0.48
HDAC6-235ENST00000495515 TRAV4A0A0B4J268 109 aa12.07□□□□□ -0.48
HDAC6-235ENST00000495515 ERVFC1-1P60608 527 aa12.07□□□□□ -0.48
HDAC6-235ENST00000495515 ZFP82Q8N141 532 aa12.07□□□□□ -0.48
HDAC6-235ENST00000495515 OR4C5Q8NGB2 326 aa12.07□□□□□ -0.48
HDAC6-235ENST00000495515 RNASE7Q9H1E1 156 aaKnown RBP12.07□□□□□ -0.48
HDAC6-235ENST00000495515 RPP21Q9H633 154 aaKnown RBP12.07□□□□□ -0.48
HDAC6-235ENST00000495515 SCRT2Q9NQ03 307 aa12.07□□□□□ -0.48
HDAC6-235ENST00000495515 IGHV4-4A0A075B6R2 117 aa12.06□□□□□ -0.48
HDAC6-235ENST00000495515 GATCO43716 136 aaKnown RBP12.06□□□□□ -0.48
HDAC6-235ENST00000495515 CIDEAO60543 219 aa12.06□□□□□ -0.48
HDAC6-235ENST00000495515 SFTA3P0C7M3 94 aa12.06□□□□□ -0.48
HDAC6-235ENST00000495515 SLAQ13239 276 aa12.06□□□□□ -0.48
HDAC6-235ENST00000495515 ZNF575Q86XF7 245 aa12.06□□□□□ -0.48
HDAC6-235ENST00000495515 A0A1W2PPQ1 181 aa12.05□□□□□ -0.48
HDAC6-235ENST00000495515 A8MWV9 139 aa12.05□□□□□ -0.48
HDAC6-235ENST00000495515 IGHV3-53P01767 116 aa12.05□□□□□ -0.48
HDAC6-235ENST00000495515 OR5AL1P0C617 328 aa12.05□□□□□ -0.48
HDAC6-235ENST00000495515 C15orf54Q8N8G6 183 aa12.05□□□□□ -0.48
HDAC6-235ENST00000495515 SSBP4Q9BWG4 385 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-235ENST00000495515 DNAH7Q8WXX0 4024 aa12.04□□□□□ -0.48
HDAC6-235ENST00000495515 TRGV4A0A0C4DH28 118 aa12.04□□□□□ -0.48
HDAC6-235ENST00000495515 M0R381 172 aa12.04□□□□□ -0.48
HDAC6-235ENST00000495515 SNAI2O43623 268 aa12.04□□□□□ -0.48
HDAC6-235ENST00000495515 RPL23P62829 140 aaKnown RBP12.04□□□□□ -0.48
HDAC6-235ENST00000495515 ADIRFQ15847 76 aa12.04□□□□□ -0.48
HDAC6-235ENST00000495515 TMEM88Q6PEY1 159 aa12.04□□□□□ -0.48
HDAC6-235ENST00000495515 FER1L6-AS1Q8NA97 138 aa12.04□□□□□ -0.48
HDAC6-235ENST00000495515 OSTCQ9NRP0 149 aa12.04□□□□□ -0.48
HDAC6-235ENST00000495515 A8MWL6 223 aa12.03□□□□□ -0.48
HDAC6-235ENST00000495515 F2Z2F3 143 aa12.03□□□□□ -0.48
HDAC6-235ENST00000495515 RS1O15537 224 aa12.03□□□□□ -0.48
HDAC6-235ENST00000495515 HOXA5P20719 270 aa12.03□□□□□ -0.48
HDAC6-235ENST00000495515 CT83Q5H943 113 aa12.03□□□□□ -0.48
HDAC6-235ENST00000495515 SPANXN1Q5VSR9 72 aa12.03□□□□□ -0.48
HDAC6-235ENST00000495515 DMRTA1Q5VZB9 504 aa12.03□□□□□ -0.48
HDAC6-235ENST00000495515 COMMD7Q86VX2 200 aa12.03□□□□□ -0.48
HDAC6-235ENST00000495515 C15orf53Q8NAA6 179 aa12.03□□□□□ -0.48
HDAC6-235ENST00000495515 ZNF479Q96JC4 524 aa12.03□□□□□ -0.48
HDAC6-235ENST00000495515 TPPP3Q9BW30 176 aa12.03□□□□□ -0.48
HDAC6-235ENST00000495515 RYR3Q15413 4870 aa12.02□□□□□ -0.48
HDAC6-235ENST00000495515 TRAV26-1A0A087WT03 109 aa12.02□□□□□ -0.49
HDAC6-235ENST00000495515 LINC00862A6NCI5 91 aa12.02□□□□□ -0.49
HDAC6-235ENST00000495515 IGLC6P0CF74 106 aa12.02□□□□□ -0.49
HDAC6-235ENST00000495515 GZMBP10144 247 aa12.02□□□□□ -0.49
HDAC6-235ENST00000495515 CFAP126Q5VTH2 177 aa12.02□□□□□ -0.49
HDAC6-235ENST00000495515 POM121L12Q8N7R1 296 aa12.02□□□□□ -0.49
HDAC6-235ENST00000495515 ISOC2Q96AB3 205 aa12.02□□□□□ -0.49
HDAC6-235ENST00000495515 PRO0255Q9UI72 69 aa12.02□□□□□ -0.49
HDAC6-235ENST00000495515 APLNQ9ULZ1 77 aa12.02□□□□□ -0.49
HDAC6-235ENST00000495515 HHLA3Q9XRX5 114 aa12.02□□□□□ -0.49
HDAC6-235ENST00000495515 H3BNG1 76 aa12.01□□□□□ -0.49
HDAC6-235ENST00000495515 CACNG7P62955 275 aa12.01□□□□□ -0.49
HDAC6-235ENST00000495515 FHL2Q14192 279 aa12.01□□□□□ -0.49
HDAC6-235ENST00000495515 OR10AG1Q8NH19 301 aa12.01□□□□□ -0.49
HDAC6-235ENST00000495515 SFRP2Q96HF1 295 aa12.01□□□□□ -0.49
HDAC6-235ENST00000495515 RHODO00212 210 aa12□□□□□ -0.49
HDAC6-235ENST00000495515 PAX4O43316 350 aa12□□□□□ -0.49
HDAC6-235ENST00000495515 NXPH4O95158 308 aa12□□□□□ -0.49
HDAC6-235ENST00000495515 PNRC1Q12796 327 aaPredicted RBP12□□□□□ -0.49
HDAC6-235ENST00000495515 ZFP2Q6ZN57 461 aa12□□□□□ -0.49
HDAC6-235ENST00000495515 OR10G8Q8NGN5 311 aa12□□□□□ -0.49
HDAC6-235ENST00000495515 A0A0J9YY99 117 aa11.99□□□□□ -0.49
HDAC6-235ENST00000495515 TMEM218A2RU14 115 aa11.98□□□□□ -0.49
HDAC6-235ENST00000495515 NUDT3O95989 172 aa11.98□□□□□ -0.49
HDAC6-235ENST00000495515 CRYBA4P53673 196 aa11.98□□□□□ -0.49
HDAC6-235ENST00000495515 WDR73Q6P4I2 378 aa11.98□□□□□ -0.49
HDAC6-235ENST00000495515 LYZL1Q6UWQ5 148 aa11.98□□□□□ -0.49
HDAC6-235ENST00000495515 TSKUQ8WUA8 353 aa11.98□□□□□ -0.49
HDAC6-235ENST00000495515 GFRA4Q9GZZ7 299 aa11.98□□□□□ -0.49
HDAC6-235ENST00000495515 MUC21A0A0G2JKD1 596 aa11.97□□□□□ -0.49
HDAC6-235ENST00000495515 MUC21A0A140T8X8 626 aa11.97□□□□□ -0.49
HDAC6-235ENST00000495515 FAM231BA6NCW3 169 aa11.97□□□□□ -0.49
HDAC6-235ENST00000495515 F8W036 122 aa11.97□□□□□ -0.49
HDAC6-235ENST00000495515 CTRLP40313 264 aa11.97□□□□□ -0.49
HDAC6-235ENST00000495515 SSTP61278 116 aa11.97□□□□□ -0.49
HDAC6-235ENST00000495515 BORCS7Q96B45 105 aa11.97□□□□□ -0.49
HDAC6-235ENST00000495515 AP1S3Q96PC3 154 aa11.97□□□□□ -0.49
HDAC6-235ENST00000495515 IGHV3-73A0A0B4J1V6 119 aa11.96□□□□□ -0.49
HDAC6-235ENST00000495515 TRBV6-4A0A1B0GX49 114 aa11.96□□□□□ -0.49
HDAC6-235ENST00000495515 SMIM17P0DL12 118 aa11.96□□□□□ -0.49
HDAC6-235ENST00000495515 GATA1P15976 413 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-235ENST00000495515 FOXA3P55318 350 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-235ENST00000495515 FAM74A4Q5TZK3 123 aa11.96□□□□□ -0.49
HDAC6-235ENST00000495515 VSIG2Q96IQ7 327 aa11.96□□□□□ -0.49
HDAC6-235ENST00000495515 PRADC1Q9BSG0 188 aa11.96□□□□□ -0.49
HDAC6-235ENST00000495515 JPT2Q9H910 190 aa11.96□□□□□ -0.49
HDAC6-235ENST00000495515 ICOSQ9Y6W8 199 aa11.96□□□□□ -0.49
HDAC6-235ENST00000495515 V9GYV3 84 aa11.96□□□□□ -0.49
HDAC6-235ENST00000495515 MUC4Q99102 2169 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms