RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 F6UB75 175 aa12.09□□□□□ -0.47
CBX4-204ENST00000495122 PRB2P02812 416 aaPredicted RBP12.09□□□□□ -0.47
CBX4-204ENST00000495122 S100A4P26447 101 aaKnown RBP12.09□□□□□ -0.47
CBX4-204ENST00000495122 CKS2P33552 79 aa12.09□□□□□ -0.47
CBX4-204ENST00000495122 SPANXN1Q5VSR9 72 aa12.09□□□□□ -0.47
CBX4-204ENST00000495122 C18orf65Q6ZTR6 163 aa12.09□□□□□ -0.47
CBX4-204ENST00000495122 FA2HQ7L5A8 372 aa12.09□□□□□ -0.47
CBX4-204ENST00000495122 DEFB125Q8N687 156 aa12.09□□□□□ -0.47
CBX4-204ENST00000495122 URB1-AS1Q96HZ7 61 aa12.09□□□□□ -0.47
CBX4-204ENST00000495122 SPAG8Q99932 426 aaPredicted RBP12.09□□□□□ -0.47
CBX4-204ENST00000495122 AP5S1Q9NUS5 200 aa12.09□□□□□ -0.47
CBX4-204ENST00000495122 COL7A1Q02388 2944 aa12.08□□□□□ -0.48
CBX4-204ENST00000495122 A0A1W2PRX2 142 aa12.08□□□□□ -0.48
CBX4-204ENST00000495122 NXPH4O95158 308 aa12.08□□□□□ -0.48
CBX4-204ENST00000495122 CDKN1BP46527 198 aa12.08□□□□□ -0.48
CBX4-204ENST00000495122 DEFB136Q30KP8 78 aa12.08□□□□□ -0.48
CBX4-204ENST00000495122 ANXA2RQ3ZCQ2 193 aa12.08□□□□□ -0.48
CBX4-204ENST00000495122 FAM159AQ6UWV7 190 aa12.08□□□□□ -0.48
CBX4-204ENST00000495122 TEX43Q6ZNM6 134 aa12.08□□□□□ -0.48
CBX4-204ENST00000495122 PRSS3P2Q8NHM4 247 aa12.08□□□□□ -0.48
CBX4-204ENST00000495122 DLX4Q92988 240 aaPredicted RBP12.08□□□□□ -0.48
CBX4-204ENST00000495122 MRAP2Q96G30 205 aa12.08□□□□□ -0.48
CBX4-204ENST00000495122 RNF185Q96GF1 192 aa12.08□□□□□ -0.48
CBX4-204ENST00000495122 CLUHP3Q96NS8 147 aa12.08□□□□□ -0.48
CBX4-204ENST00000495122 PRSS47A8MTI9 375 aa12.07□□□□□ -0.48
CBX4-204ENST00000495122 TFPI2P48307 235 aa12.07□□□□□ -0.48
CBX4-204ENST00000495122 CMC4P56277 68 aaPredicted RBP12.07□□□□□ -0.48
CBX4-204ENST00000495122 PMCHL1Q16048 86 aa12.07□□□□□ -0.48
CBX4-204ENST00000495122 OR10AG1Q8NH19 301 aa12.07□□□□□ -0.48
CBX4-204ENST00000495122 RAX2Q96IS3 184 aa12.07□□□□□ -0.48
CBX4-204ENST00000495122 HSPB8Q9UJY1 196 aa12.07□□□□□ -0.48
CBX4-204ENST00000495122 IGHV1-24A0A0C4DH33 117 aa12.06□□□□□ -0.48
CBX4-204ENST00000495122 LINC01546A6NGU7 62 aa12.06□□□□□ -0.48
CBX4-204ENST00000495122 H3BVH4 76 aa12.06□□□□□ -0.48
CBX4-204ENST00000495122 CCL24O00175 119 aa12.06□□□□□ -0.48
CBX4-204ENST00000495122 HLA-DRB4P13762 266 aa12.06□□□□□ -0.48
CBX4-204ENST00000495122 BTF3P20290 206 aaKnown RBP12.06□□□□□ -0.48
CBX4-204ENST00000495122 KRTDAPP60985 99 aa12.06□□□□□ -0.48
CBX4-204ENST00000495122 DEFB114Q30KQ6 69 aa12.06□□□□□ -0.48
CBX4-204ENST00000495122 CDPF1Q6NVV7 123 aa12.06□□□□□ -0.48
CBX4-204ENST00000495122 FAM19A2Q8N3H0 131 aa12.06□□□□□ -0.48
CBX4-204ENST00000495122 MAP1LC3AQ9H492 121 aa12.06□□□□□ -0.48
CBX4-204ENST00000495122 NXT2Q9NPJ8 142 aaKnown RBP12.06□□□□□ -0.48
CBX4-204ENST00000495122 HLA-DRB4X5D2U9 266 aa12.06□□□□□ -0.48
CBX4-204ENST00000495122 CRXO43186 299 aaPredicted RBP12.05□□□□□ -0.48
CBX4-204ENST00000495122 LEPROTL1O95214 131 aa12.05□□□□□ -0.48
CBX4-204ENST00000495122 C3orf79P0CE67 100 aa12.05□□□□□ -0.48
CBX4-204ENST00000495122 CD33P20138 364 aa12.05□□□□□ -0.48
CBX4-204ENST00000495122 WFDC9Q8NEX5 89 aa12.05□□□□□ -0.48
CBX4-204ENST00000495122 OR2K2Q8NGT1 345 aa12.05□□□□□ -0.48
CBX4-204ENST00000495122 PHLDA3Q9Y5J5 127 aa12.05□□□□□ -0.48
CBX4-204ENST00000495122 C20orf202A1L168 122 aa12.04□□□□□ -0.48
CBX4-204ENST00000495122 PPP1R17O96001 155 aa12.04□□□□□ -0.48
CBX4-204ENST00000495122 DEFB1P60022 68 aa12.04□□□□□ -0.48
CBX4-204ENST00000495122 AMTNQ6UX39 209 aa12.04□□□□□ -0.48
CBX4-204ENST00000495122 TMEM61Q8N0U2 210 aa12.04□□□□□ -0.48
CBX4-204ENST00000495122 AP1S3Q96PC3 154 aa12.04□□□□□ -0.48
CBX4-204ENST00000495122 TMEM70Q9BUB7 260 aa12.04□□□□□ -0.48
CBX4-204ENST00000495122 DPH3P1Q9H4G8 78 aa12.04□□□□□ -0.48
CBX4-204ENST00000495122 MSRB1Q9NZV6 116 aa12.04□□□□□ -0.48
CBX4-204ENST00000495122 MUC21A0A0G2JKD1 596 aa12.03□□□□□ -0.48
CBX4-204ENST00000495122 KIR2DL5BA0A0G2JN68 375 aa12.03□□□□□ -0.48
CBX4-204ENST00000495122 KIR2DL5BA0A0G2JPC4 375 aa12.03□□□□□ -0.48
CBX4-204ENST00000495122 MUC21A0A140T8X8 626 aa12.03□□□□□ -0.48
CBX4-204ENST00000495122 M0R381 172 aa12.03□□□□□ -0.48
CBX4-204ENST00000495122 PF4P02776 101 aa12.03□□□□□ -0.48
CBX4-204ENST00000495122 IGLL1P15814 213 aa12.03□□□□□ -0.48
CBX4-204ENST00000495122 MUC21Q5SSG8 566 aa12.03□□□□□ -0.48
CBX4-204ENST00000495122 KIR2DL5AQ8N109 375 aa12.03□□□□□ -0.48
CBX4-204ENST00000495122 MRAPQ8TCY5 172 aa12.03□□□□□ -0.48
CBX4-204ENST00000495122 C20orf144Q9BQM9 153 aa12.03□□□□□ -0.48
CBX4-204ENST00000495122 TRGV11A0A075B6L2 103 aa12.02□□□□□ -0.49
CBX4-204ENST00000495122 J3KRW8 73 aa12.02□□□□□ -0.49
CBX4-204ENST00000495122 NPYP01303 97 aa12.02□□□□□ -0.49
CBX4-204ENST00000495122 RNASE3P12724 160 aaKnown RBP12.02□□□□□ -0.49
CBX4-204ENST00000495122 PET117Q6UWS5 81 aa12.02□□□□□ -0.49
CBX4-204ENST00000495122 ZNF664Q8N3J9 261 aa12.02□□□□□ -0.49
CBX4-204ENST00000495122 POM121L12Q8N7R1 296 aa12.02□□□□□ -0.49
CBX4-204ENST00000495122 Q8N976 141 aa12.02□□□□□ -0.49
CBX4-204ENST00000495122 VAMP8Q9BV40 100 aa12.02□□□□□ -0.49
CBX4-204ENST00000495122 IGHV1OR15-1A0A075B7D0 117 aa12.01□□□□□ -0.49
CBX4-204ENST00000495122 H3BMM0 161 aa12.01□□□□□ -0.49
CBX4-204ENST00000495122 K7EMI3 77 aa12.01□□□□□ -0.49
CBX4-204ENST00000495122 TNFRSF6BO95407 300 aa12.01□□□□□ -0.49
CBX4-204ENST00000495122 DEFB131AP59861 70 aa12.01□□□□□ -0.49
CBX4-204ENST00000495122 SPATA12Q7Z6I5 190 aa12.01□□□□□ -0.49
CBX4-204ENST00000495122 SYT8Q8NBV8 401 aa12.01□□□□□ -0.49
CBX4-204ENST00000495122 LINC00467Q9BRT7 94 aa12.01□□□□□ -0.49
CBX4-204ENST00000495122 MAP1LC3CQ9BXW4 147 aa12.01□□□□□ -0.49
CBX4-204ENST00000495122 TRAV12-3A0A0B4J271 114 aa12□□□□□ -0.49
CBX4-204ENST00000495122 EVI2AP22794 236 aa12□□□□□ -0.49
CBX4-204ENST00000495122 DDTP30046 118 aa12□□□□□ -0.49
CBX4-204ENST00000495122 IFI27P40305 119 aaPredicted RBP12□□□□□ -0.49
CBX4-204ENST00000495122 LINC00482Q8N8I6 264 aa12□□□□□ -0.49
CBX4-204ENST00000495122 Q8N8P6 123 aa12□□□□□ -0.49
CBX4-204ENST00000495122 C9orf85Q96MD7 179 aa12□□□□□ -0.49
CBX4-204ENST00000495122 FAM110AQ9BQ89 295 aa12□□□□□ -0.49
CBX4-204ENST00000495122 MAP6D1Q9H9H5 199 aa12□□□□□ -0.49
CBX4-204ENST00000495122 DNAH9Q9NYC9 4486 aa12□□□□□ -0.49
CBX4-204ENST00000495122 SYS1-DBNDD2H3BUS1 97 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms