RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 RNF222A6NCQ9 220 aa9.34□□□□□ -0.91
VARS-228ENST00000495010 K7EQM0 130 aa9.34□□□□□ -0.91
VARS-228ENST00000495010 EIF3GO75821 320 aaKnown RBP eCLIP9.34□□□□□ -0.91
VARS-228ENST00000495010 IGLV2-8P01709 118 aa9.34□□□□□ -0.91
VARS-228ENST00000495010 FGF8P55075 233 aaPredicted RBP9.34□□□□□ -0.91
VARS-228ENST00000495010 KCNIP4Q6PIL6 250 aa9.34□□□□□ -0.91
VARS-228ENST00000495010 PQLC2Q6ZP29 291 aa9.34□□□□□ -0.91
VARS-228ENST00000495010 CYB561D1Q8N8Q1 229 aa9.34□□□□□ -0.91
VARS-228ENST00000495010 SERTM2A0A1B0GWG4 89 aa9.33□□□□□ -0.92
VARS-228ENST00000495010 A8MWV9 139 aa9.33□□□□□ -0.92
VARS-228ENST00000495010 GCGP01275 180 aa9.33□□□□□ -0.92
VARS-228ENST00000495010 KRTAP10-4P60372 401 aaPredicted RBP9.33□□□□□ -0.92
VARS-228ENST00000495010 CYCSP99999 105 aaKnown RBP9.33□□□□□ -0.92
VARS-228ENST00000495010 LGALSLQ3ZCW2 172 aaPredicted RBP9.33□□□□□ -0.92
VARS-228ENST00000495010 MZT2BQ6NZ67 158 aa9.33□□□□□ -0.92
VARS-228ENST00000495010 ZFP2Q6ZN57 461 aa9.33□□□□□ -0.92
VARS-228ENST00000495010 OR2T35Q8NGX2 323 aa9.33□□□□□ -0.92
VARS-228ENST00000495010 S100A4P26447 101 aaKnown RBP9.32□□□□□ -0.92
VARS-228ENST00000495010 ZNF80P51504 273 aaPredicted RBP9.32□□□□□ -0.92
VARS-228ENST00000495010 RPL37AP61513 92 aaKnown RBP9.32□□□□□ -0.92
VARS-228ENST00000495010 ELOBQ15370 118 aa9.32□□□□□ -0.92
VARS-228ENST00000495010 TMEM75Q8N9X5 138 aa9.32□□□□□ -0.92
VARS-228ENST00000495010 SMIM3Q9BZL3 60 aa9.32□□□□□ -0.92
VARS-228ENST00000495010 PARLQ9H300 379 aa9.32□□□□□ -0.92
VARS-228ENST00000495010 C11orf21Q9P2W6 132 aa9.32□□□□□ -0.92
VARS-228ENST00000495010 KLK12Q9UKR0 248 aa9.32□□□□□ -0.92
VARS-228ENST00000495010 H0YIZ8 118 aa9.31□□□□□ -0.92
VARS-228ENST00000495010 C14orf177Q52M58 125 aa9.31□□□□□ -0.92
VARS-228ENST00000495010 SMUG1Q53HV7 270 aa9.31□□□□□ -0.92
VARS-228ENST00000495010 UBE2WQ96B02 151 aa9.31□□□□□ -0.92
VARS-228ENST00000495010 PSG8Q9UQ74 426 aa9.31□□□□□ -0.92
VARS-228ENST00000495010 HSPB11Q9Y547 144 aa9.31□□□□□ -0.92
VARS-228ENST00000495010 A0A087WX48 190 aa9.3□□□□□ -0.92
VARS-228ENST00000495010 HMGB3O15347 200 aaKnown RBP9.3□□□□□ -0.92
VARS-228ENST00000495010 IGLV2-11P01706 119 aa9.3□□□□□ -0.92
VARS-228ENST00000495010 LINC00694P0DN24 101 aa9.3□□□□□ -0.92
VARS-228ENST00000495010 RNASE3P12724 160 aaKnown RBP9.3□□□□□ -0.92
VARS-228ENST00000495010 PRNTQ86SH4 94 aa9.3□□□□□ -0.92
VARS-228ENST00000495010 NIT1Q86X76 327 aa9.3□□□□□ -0.92
VARS-228ENST00000495010 OR10G9Q8NGN4 311 aa9.3□□□□□ -0.92
VARS-228ENST00000495010 CCDC32Q9BV29 185 aa9.3□□□□□ -0.92
VARS-228ENST00000495010 SAMD10Q9BYL1 202 aa9.3□□□□□ -0.92
VARS-228ENST00000495010 TCRAP04437 139 aa9.29□□□□□ -0.92
VARS-228ENST00000495010 PET100P0DJ07 73 aa9.29□□□□□ -0.92
VARS-228ENST00000495010 C5orf17Q8NAS9 161 aa9.29□□□□□ -0.92
VARS-228ENST00000495010 OR10G7Q8NGN6 311 aa9.29□□□□□ -0.92
VARS-228ENST00000495010 LRP1Q07954 4544 aaKnown RBP9.28□□□□□ -0.92
VARS-228ENST00000495010 RPL12P30050 165 aaKnown RBP9.28□□□□□ -0.92
VARS-228ENST00000495010 ASIPP42127 132 aa9.28□□□□□ -0.92
VARS-228ENST00000495010 RAB2AP61019 212 aa9.28□□□□□ -0.92
VARS-228ENST00000495010 FLI1Q01543 452 aaPredicted RBP9.28□□□□□ -0.92
VARS-228ENST00000495010 Q0VG73 95 aa9.28□□□□□ -0.92
VARS-228ENST00000495010 PIK3CD-AS1Q5SR53 167 aa9.28□□□□□ -0.92
VARS-228ENST00000495010 C14orf178Q8N769 122 aaPredicted RBP9.28□□□□□ -0.92
VARS-228ENST00000495010 PPP1R1CQ8WVI7 109 aa9.28□□□□□ -0.92
VARS-228ENST00000495010 DNAJC30Q96LL9 226 aa9.28□□□□□ -0.92
VARS-228ENST00000495010 LINC00479Q96M42 142 aa9.28□□□□□ -0.92
VARS-228ENST00000495010 HMCN2Q8NDA2 5059 aa9.27□□□□□ -0.93
VARS-228ENST00000495010 RHODO00212 210 aa9.27□□□□□ -0.93
VARS-228ENST00000495010 ARL14EPLP0DKL9 152 aa9.27□□□□□ -0.93
VARS-228ENST00000495010 SAPCD1Q5SSQ6 148 aa9.27□□□□□ -0.93
VARS-228ENST00000495010 DMRTA1Q5VZB9 504 aa9.27□□□□□ -0.93
VARS-228ENST00000495010 OR2G3Q8NGZ4 309 aa9.27□□□□□ -0.93
VARS-228ENST00000495010 ENKURQ8TC29 256 aa9.27□□□□□ -0.93
VARS-228ENST00000495010 CHCHD7Q9BUK0 85 aa9.27□□□□□ -0.93
VARS-228ENST00000495010 C1orf43Q9BWL3 253 aa9.27□□□□□ -0.93
VARS-228ENST00000495010 Q9UF83 564 aa9.27□□□□□ -0.93
VARS-228ENST00000495010 CDC34P49427 236 aaPredicted RBP9.26□□□□□ -0.93
VARS-228ENST00000495010 FAM74A4Q5TZK3 123 aa9.26□□□□□ -0.93
VARS-228ENST00000495010 JPT2Q9H910 190 aa9.26□□□□□ -0.93
VARS-228ENST00000495010 UBR4Q5T4S7 5183 aa9.25□□□□□ -0.93
VARS-228ENST00000495010 TMEM262E9PQX1 116 aa9.25□□□□□ -0.93
VARS-228ENST00000495010 MPC2O95563 127 aa9.25□□□□□ -0.93
VARS-228ENST00000495010 CRPP02741 224 aa9.25□□□□□ -0.93
VARS-228ENST00000495010 SUMO1P63165 101 aaKnown RBP9.25□□□□□ -0.93
VARS-228ENST00000495010 EPDR1Q9UM22 224 aa9.25□□□□□ -0.93
VARS-228ENST00000495010 IGKV3D-20A0A0C4DH25 116 aa9.24□□□□□ -0.93
VARS-228ENST00000495010 FABP5P3A8MUU1 101 aa9.24□□□□□ -0.93
VARS-228ENST00000495010 UFSP1Q6NVU6 142 aa9.24□□□□□ -0.93
VARS-228ENST00000495010 ATRAIDQ6UW56 229 aa9.24□□□□□ -0.93
VARS-228ENST00000495010 DAZAP1Q96EP5 407 aaKnown RBP9.24□□□□□ -0.93
VARS-228ENST00000495010 IL36BQ9NZH7 164 aa9.24□□□□□ -0.93
VARS-228ENST00000495010 B4DEV8 164 aa9.23□□□□□ -0.93
VARS-228ENST00000495010 H3BVH4 76 aa9.23□□□□□ -0.93
VARS-228ENST00000495010 STAG3L2P0CL84 134 aa9.23□□□□□ -0.93
VARS-228ENST00000495010 STAG3L3P0CL85 134 aa9.23□□□□□ -0.93
VARS-228ENST00000495010 GCHFRP30047 84 aa9.23□□□□□ -0.93
VARS-228ENST00000495010 HNRNPA3P51991 378 aaKnown RBP9.23□□□□□ -0.93
VARS-228ENST00000495010 H2BFSP57053 126 aa9.23□□□□□ -0.93
VARS-228ENST00000495010 RPL36AP83881 106 aaKnown RBP9.23□□□□□ -0.93
VARS-228ENST00000495010 OR11H4Q8NGC9 324 aa9.23□□□□□ -0.93
VARS-228ENST00000495010 RPL36ALQ969Q0 106 aaKnown RBP9.23□□□□□ -0.93
VARS-228ENST00000495010 WFDC1Q9HC57 220 aa9.23□□□□□ -0.93
VARS-228ENST00000495010 SSNA1O43805 119 aa9.22□□□□□ -0.93
VARS-228ENST00000495010 HLA-DQA1P01909 254 aa9.22□□□□□ -0.93
VARS-228ENST00000495010 RAB24Q969Q5 203 aa9.22□□□□□ -0.93
VARS-228ENST00000495010 TMEM167BQ9NRX6 74 aa9.22□□□□□ -0.93
VARS-228ENST00000495010 FAT3Q8TDW7 4589 aa9.21□□□□□ -0.93
VARS-228ENST00000495010 A0A087WWL8 130 aa9.21□□□□□ -0.94
VARS-228ENST00000495010 USP17L23D6RBM5 183 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms