RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 A0A1W2PPC4 97 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 SDHAF1A6NFY7 115 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 C11orf86A6NJI1 115 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 CGB1A6NKQ9 187 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 LY6LH3BQJ8 138 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 K7ESF4 209 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 LST1O00453 97 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 WNT9BO14905 357 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 NDUFA3O95167 84 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 OXTP01178 125 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 ELANEP08246 267 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 CGB3P0DN86 165 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 CGB7P0DN87 165 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 COX6A1P12074 109 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 CRIP1P50238 77 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 ZNF134P52741 427 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 CRIP2P52943 208 aaPredicted RBP2.09□□□□□ -2.07
MDC1-208ENST00000494654 WT1-ASQ06250 92 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 ERCC8Q13216 396 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 SRSF9Q13242 221 aaKnown RBP eCLIP2.09□□□□□ -2.07
MDC1-208ENST00000494654 C17orf58Q2M2W7 97 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 ZNF672Q499Z4 452 aaPredicted RBP2.09□□□□□ -2.07
MDC1-208ENST00000494654 GAGE2AQ6NT46 116 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 GUSBP11Q6P575 273 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 C2orf82Q6UX34 121 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 C5orf38Q86SI9 138 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 LINC00643Q86TS7 51 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 EXOC3-AS1Q8N2X6 119 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 CD177Q8N6Q3 437 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 C3orf56Q8N813 242 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 SLC25A29Q8N8R3 303 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 NRACQ8N912 160 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 LINC01356Q8N9X3 169 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 FLYWCH2Q96CP2 140 aaKnown RBP2.09□□□□□ -2.07
MDC1-208ENST00000494654 C2orf48Q96LS8 159 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 C8orf49Q96NF6 230 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 PRR25Q96S07 402 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 ASCL2Q99929 193 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 SHANK2-AS3Q9BTD1 123 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 PRORYQ9H606 182 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 MRPL36Q9P0J6 103 aaKnown RBP2.09□□□□□ -2.07
MDC1-208ENST00000494654 PRO0628Q9UI54 55 aa2.09□□□□□ -2.07
MDC1-208ENST00000494654 ZNF256Q9Y2P7 627 aaPredicted RBP2.09□□□□□ -2.07
MDC1-208ENST00000494654 TEP1Q99973 2627 aaKnown RBP2.09□□□□□ -2.08
MDC1-208ENST00000494654 MUC4Q99102 2169 aa2.09□□□□□ -2.08
MDC1-208ENST00000494654 NBPF19A0A087WUL8 3843 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 ARFGEF3Q5TH69 2177 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 IGLV4-69A0A075B6H9 119 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 IGHV4-4A0A075B6R2 117 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 IGKV1D-17A0A075B6S4 117 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 A0A1W2PR77 199 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 C17orf100A8MU93 164 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 EPM2AB3EWF7 344 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 LMO7DNF2Z398 122 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 J3QKU1 62 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 J3QLI3 93 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 CDX4O14627 284 aaPredicted RBP2.08□□□□□ -2.08
MDC1-208ENST00000494654 RS1O15537 224 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 TRIAP1O43715 76 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 SCRG1O75711 98 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 IGHV3-9P01782 118 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 TRACP01848 142 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 GRPP07492 148 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 WT1P19544 449 aaPredicted RBP2.08□□□□□ -2.08
MDC1-208ENST00000494654 PRDX2P32119 198 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 TSPEAR-AS2P59090 65 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 KRTAP10-2P60368 255 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 LYZP61626 148 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 HOXA4Q00056 320 aaPredicted RBP2.08□□□□□ -2.08
MDC1-208ENST00000494654 RPL18AQ02543 176 aaKnown RBP2.08□□□□□ -2.08
MDC1-208ENST00000494654 CFHR1Q03591 330 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 ZNF56Q15929 161 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 Q1RN00 199 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 VMA21Q3ZAQ7 101 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 CEMP1Q6PRD7 247 aaPredicted RBP2.08□□□□□ -2.08
MDC1-208ENST00000494654 SFTA2Q6UW10 78 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 ZNF843Q8N446 348 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 FAM216BQ8N7L0 139 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 DAND5Q8N907 189 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 KLF14Q8TD94 323 aaPredicted RBP2.08□□□□□ -2.08
MDC1-208ENST00000494654 DPH3Q96FX2 82 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 C9orf85Q96MD7 179 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 AMELXQ99217 191 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 VKORC1Q9BQB6 163 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 SLC50A1Q9BRV3 221 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 PIMREGQ9BSJ6 248 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 UPK3BQ9BT76 320 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 DCTN5Q9BTE1 182 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 LINC00574Q9H8X3 128 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 DYNLRB1Q9NP97 96 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 PEMTQ9UBM1 199 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 KLK5Q9Y337 293 aaPredicted RBP2.08□□□□□ -2.08
MDC1-208ENST00000494654 ICOSQ9Y6W8 199 aa2.08□□□□□ -2.08
MDC1-208ENST00000494654 MYO18BQ8IUG5 2567 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 GON4LQ3T8J9 2241 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 CACNA1EQ15878 2313 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 ZNF462Q96JM2 2506 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 IGHV1OR15-9A0A0B4J2B8 117 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 IGHV7-4-1A0A0J9YVY3 117 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 TINCRA0A1B0GVN0 87 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms