RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 RNF222A6NCQ9 220 aa6.52□□□□□ -1.37
MSH5-218ENST00000494646 TAAR5O14804 337 aa6.52□□□□□ -1.37
MSH5-218ENST00000494646 IFNA7P01567 189 aa6.52□□□□□ -1.37
MSH5-218ENST00000494646 BTF3P20290 206 aaKnown RBP6.52□□□□□ -1.37
MSH5-218ENST00000494646 Q6ZRN7 208 aaPredicted RBP6.52□□□□□ -1.37
MSH5-218ENST00000494646 MAPKAPK5-AS1Q8N8E1 139 aa6.52□□□□□ -1.37
MSH5-218ENST00000494646 NHLRC2Q8NBF2 726 aa6.52□□□□□ -1.37
MSH5-218ENST00000494646 OR2T35Q8NGX2 323 aa6.52□□□□□ -1.37
MSH5-218ENST00000494646 TXNDC17Q9BRA2 123 aa6.52□□□□□ -1.37
MSH5-218ENST00000494646 A0A087WWL8 130 aa6.51□□□□□ -1.37
MSH5-218ENST00000494646 BORCS7-ASMTA0A0B4J1R7 106 aa6.51□□□□□ -1.37
MSH5-218ENST00000494646 FBLL1A6NHQ2 334 aaKnown RBP6.51□□□□□ -1.37
MSH5-218ENST00000494646 RS1O15537 224 aa6.51□□□□□ -1.37
MSH5-218ENST00000494646 CDK2AP2O75956 126 aa6.51□□□□□ -1.37
MSH5-218ENST00000494646 PFN1P07737 140 aaKnown RBP6.51□□□□□ -1.37
MSH5-218ENST00000494646 GATA1P15976 413 aaPredicted RBP6.51□□□□□ -1.37
MSH5-218ENST00000494646 EVI2AP22794 236 aa6.51□□□□□ -1.37
MSH5-218ENST00000494646 ZFP69Q49AA0 526 aa6.51□□□□□ -1.37
MSH5-218ENST00000494646 CFAP126Q5VTH2 177 aa6.51□□□□□ -1.37
MSH5-218ENST00000494646 CYB561D1Q8N8Q1 229 aa6.51□□□□□ -1.37
MSH5-218ENST00000494646 SLC25A29Q8N8R3 303 aa6.51□□□□□ -1.37
MSH5-218ENST00000494646 C1orf43Q9BWL3 253 aa6.51□□□□□ -1.37
MSH5-218ENST00000494646 IGKV3D-20A0A0C4DH25 116 aa6.5□□□□□ -1.37
MSH5-218ENST00000494646 CTXND1A0A1B0GTU2 59 aa6.5□□□□□ -1.37
MSH5-218ENST00000494646 A0A1W2PRE2 83 aa6.5□□□□□ -1.37
MSH5-218ENST00000494646 SMLR1H3BR10 107 aa6.5□□□□□ -1.37
MSH5-218ENST00000494646 ARPC5O15511 151 aa6.5□□□□□ -1.37
MSH5-218ENST00000494646 SAPCD1Q5SSQ6 148 aa6.5□□□□□ -1.37
MSH5-218ENST00000494646 FABP5P3A8MUU1 101 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 G3V3Q6 166 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 H3BS24 57 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 CRYGDP07320 174 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 DNAH10OSP0CZ25 163 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 RNASE3P12724 160 aaKnown RBP6.49□□□□□ -1.37
MSH5-218ENST00000494646 S100A4P26447 101 aaKnown RBP6.49□□□□□ -1.37
MSH5-218ENST00000494646 PPT1P50897 306 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 ERVFC1-1P60608 527 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 ZNF506Q5JVG8 444 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 AKR1C8PQ5T2L2 129 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 NFE4Q86UQ8 179 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 C9orf85Q96MD7 179 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 SCRT2Q9NQ03 307 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 CYTL1Q9NRR1 136 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 MSRB1Q9NZV6 116 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 ARL2-SNX15V9GYD0 113 aa6.49□□□□□ -1.37
MSH5-218ENST00000494646 GRIFINA4D1Z8 144 aa6.48□□□□□ -1.37
MSH5-218ENST00000494646 FAM74A7A6NL05 159 aa6.48□□□□□ -1.37
MSH5-218ENST00000494646 PEX7O00628 323 aa6.48□□□□□ -1.37
MSH5-218ENST00000494646 CRIP1P50238 77 aa6.48□□□□□ -1.37
MSH5-218ENST00000494646 RGS21Q2M5E4 152 aa6.48□□□□□ -1.37
MSH5-218ENST00000494646 LGALSLQ3ZCW2 172 aaPredicted RBP6.48□□□□□ -1.37
MSH5-218ENST00000494646 OR10J3Q5JRS4 329 aa6.48□□□□□ -1.37
MSH5-218ENST00000494646 Q6ZSN1 163 aa6.48□□□□□ -1.37
MSH5-218ENST00000494646 PRADC1Q9BSG0 188 aa6.48□□□□□ -1.37
MSH5-218ENST00000494646 JPT2Q9H910 190 aa6.48□□□□□ -1.37
MSH5-218ENST00000494646 A0A087WTM6 91 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 TRAV8-6A0A0B4J262 113 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 IGHV3-38A0A0C4DH36 116 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 TRBV6-4A0A1B0GX49 114 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 B4DEV8 164 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 M0R036 132 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 IGHV3-30P01768 117 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 IGHV3-33P01772 117 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 IGHV3-30-3P0DP02 117 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 IGHV3-30-5P0DP03 117 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 FHITP49789 147 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 RHOHQ15669 191 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 DGAT2L7PQ6IED9 249 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 PET117Q6UWS5 81 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 SH2D6Q7Z4S9 175 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 Q8N1X5 172 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 Q9UF83 564 aa6.47□□□□□ -1.37
MSH5-218ENST00000494646 TMSB15BA0A087X1C1 80 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 A0A1B0GV50 99 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 MAP1LC3B2A6NCE7 125 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 GAGE12JA6NER3 117 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 FAM229AH3BQW9 127 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 CIDEAO60543 219 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 GAGE1Q13065 139 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 GAGE4Q13068 117 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 GAGE5Q13069 117 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 GAGE13Q4V321 117 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 CST9LP1Q5W188 147 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 ATP6V0E2Q8NHE4 81 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 HIST1H2BAQ96A08 127 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 PTH2Q96A98 100 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 ZC2HC1AQ96GY0 325 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 SAMD10Q9BYL1 202 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 NKX6-2Q9C056 277 aaPredicted RBP6.46□□□□□ -1.38
MSH5-218ENST00000494646 MAP1LC3BQ9GZQ8 125 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 Q9HAA7 133 aa6.46□□□□□ -1.38
MSH5-218ENST00000494646 KRBOX1C9JBD0 128 aa6.45□□□□□ -1.38
MSH5-218ENST00000494646 H3BVH4 76 aa6.45□□□□□ -1.38
MSH5-218ENST00000494646 K7EP13 123 aa6.45□□□□□ -1.38
MSH5-218ENST00000494646 PSCAO43653 123 aa6.45□□□□□ -1.38
MSH5-218ENST00000494646 SH2D1AO60880 128 aa6.45□□□□□ -1.38
MSH5-218ENST00000494646 ARMS2P0C7Q2 107 aa6.45□□□□□ -1.38
MSH5-218ENST00000494646 MGST1P10620 155 aaKnown RBP6.45□□□□□ -1.38
MSH5-218ENST00000494646 ASIPP42127 132 aa6.45□□□□□ -1.38
MSH5-218ENST00000494646 TIRAPP58753 221 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms