RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 COL6A6A6NMZ7 2263 aa1.81□□□□□ -2.12
CMSS1-207ENST00000494412 TRBV6-5A0A0K0K1A5 114 aa1.81□□□□□ -2.12
CMSS1-207ENST00000494412 OR1I1O60431 355 aa1.81□□□□□ -2.12
CMSS1-207ENST00000494412 FABP2P12104 132 aa1.81□□□□□ -2.12
CMSS1-207ENST00000494412 POLR2HP52434 150 aaKnown RBP1.81□□□□□ -2.12
CMSS1-207ENST00000494412 KRTAP12-1P59990 96 aa1.81□□□□□ -2.12
CMSS1-207ENST00000494412 EIF3IQ13347 325 aaKnown RBP1.81□□□□□ -2.12
CMSS1-207ENST00000494412 PCOTHQ58A44 107 aa1.81□□□□□ -2.12
CMSS1-207ENST00000494412 KRTAP13-1Q8IUC0 172 aa1.81□□□□□ -2.12
CMSS1-207ENST00000494412 C12orf29Q8N999 325 aa1.81□□□□□ -2.12
CMSS1-207ENST00000494412 CHCHD1Q96BP2 118 aaKnown RBP1.81□□□□□ -2.12
CMSS1-207ENST00000494412 MED31Q9Y3C7 131 aa1.81□□□□□ -2.12
CMSS1-207ENST00000494412 COL11A1P12107 1806 aaPredicted RBP1.81□□□□□ -2.12
CMSS1-207ENST00000494412 OTOGQ6ZRI0 2925 aa1.81□□□□□ -2.12
CMSS1-207ENST00000494412 HIVEP3Q5T1R4 2406 aa1.81□□□□□ -2.12
CMSS1-207ENST00000494412 RP1L1Q8IWN7 2480 aaPredicted RBP1.8□□□□□ -2.12
CMSS1-207ENST00000494412 PTPRFP10586 1907 aa1.8□□□□□ -2.12
CMSS1-207ENST00000494412 TRAV12-1A0A0B4J245 112 aa1.8□□□□□ -2.12
CMSS1-207ENST00000494412 ARL5CA6NH57 179 aa1.8□□□□□ -2.12
CMSS1-207ENST00000494412 RPL35P42766 123 aaKnown RBP1.8□□□□□ -2.12
CMSS1-207ENST00000494412 KLRD1Q13241 179 aa1.8□□□□□ -2.12
CMSS1-207ENST00000494412 PHF5AQ7RTV0 110 aaKnown RBP1.8□□□□□ -2.12
CMSS1-207ENST00000494412 CLECL1Q8IZS7 167 aa1.8□□□□□ -2.12
CMSS1-207ENST00000494412 TCEAL2Q9H3H9 227 aaPredicted RBP1.8□□□□□ -2.12
CMSS1-207ENST00000494412 NBEAL2Q6ZNJ1 2754 aa1.8□□□□□ -2.12
CMSS1-207ENST00000494412 PDZD2O15018 2839 aa1.8□□□□□ -2.12
CMSS1-207ENST00000494412 ATG2AQ2TAZ0 1938 aa1.79□□□□□ -2.12
CMSS1-207ENST00000494412 AHCTF1Q8WYP5 2266 aa1.79□□□□□ -2.12
CMSS1-207ENST00000494412 HIVEP1P15822 2718 aa1.79□□□□□ -2.12
CMSS1-207ENST00000494412 CELSR1Q9NYQ6 3014 aa1.79□□□□□ -2.12
CMSS1-207ENST00000494412 BOD1L1Q8NFC6 3051 aa1.79□□□□□ -2.12
CMSS1-207ENST00000494412 KPNA4O00629 521 aaPredicted RBP1.79□□□□□ -2.12
CMSS1-207ENST00000494412 DHFRP00374 187 aa1.79□□□□□ -2.12
CMSS1-207ENST00000494412 OR10J4P0C629 311 aa1.79□□□□□ -2.12
CMSS1-207ENST00000494412 RPS3P23396 243 aaKnown RBP eCLIP1.79□□□□□ -2.12
CMSS1-207ENST00000494412 SDC2P34741 201 aa1.79□□□□□ -2.12
CMSS1-207ENST00000494412 NDUFA6P56556 154 aa1.79□□□□□ -2.12
CMSS1-207ENST00000494412 TMEM254Q8TBM7 123 aa1.79□□□□□ -2.12
CMSS1-207ENST00000494412 POP5Q969H6 163 aaKnown RBP1.79□□□□□ -2.12
CMSS1-207ENST00000494412 MYOFQ9NZM1 2061 aa1.79□□□□□ -2.12
CMSS1-207ENST00000494412 DIDO1Q9BTC0 2240 aaKnown RBP1.79□□□□□ -2.12
CMSS1-207ENST00000494412 ADGRG4Q8IZF6 3080 aa1.79□□□□□ -2.12
CMSS1-207ENST00000494412 URB1O60287 2271 aaKnown RBP1.78□□□□□ -2.12
CMSS1-207ENST00000494412 DOCK1Q14185 1865 aa1.78□□□□□ -2.12
CMSS1-207ENST00000494412 SPEF2Q9C093 1822 aa1.78□□□□□ -2.12
CMSS1-207ENST00000494412 SIPA1L3O60292 1781 aaPredicted RBP1.78□□□□□ -2.12
CMSS1-207ENST00000494412 ROCK2O75116 1388 aaKnown RBP1.78□□□□□ -2.12
CMSS1-207ENST00000494412 C17orf112F2Z3M2 114 aa1.78□□□□□ -2.12
CMSS1-207ENST00000494412 M0R233 179 aa1.78□□□□□ -2.12
CMSS1-207ENST00000494412 MT-ND6P03923 174 aa1.78□□□□□ -2.12
CMSS1-207ENST00000494412 SCGB1A1P11684 91 aa1.78□□□□□ -2.12
CMSS1-207ENST00000494412 RAB5CP51148 216 aa1.78□□□□□ -2.12
CMSS1-207ENST00000494412 ROMO1P60602 79 aa1.78□□□□□ -2.12
CMSS1-207ENST00000494412 RAB4BP61018 213 aa1.78□□□□□ -2.12
CMSS1-207ENST00000494412 PDE6HQ13956 83 aa1.78□□□□□ -2.12
CMSS1-207ENST00000494412 C10orf55Q5SWW7 151 aa1.78□□□□□ -2.12
CMSS1-207ENST00000494412 DEFB124Q8NES8 71 aa1.78□□□□□ -2.12
CMSS1-207ENST00000494412 OR5D14Q8NGL3 314 aa1.78□□□□□ -2.12
CMSS1-207ENST00000494412 NIPBLQ6KC79 2804 aaeCLIP1.78□□□□□ -2.12
CMSS1-207ENST00000494412 CACNA1EQ15878 2313 aa1.78□□□□□ -2.13
CMSS1-207ENST00000494412 SCN3AQ9NY46 2000 aa1.78□□□□□ -2.13
CMSS1-207ENST00000494412 TANC1Q9C0D5 1861 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 TSC2P49815 1807 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 TLN2Q9Y4G6 2542 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 HIVEP2P31629 2446 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 SDK1Q7Z5N4 2213 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 AKAP9Q99996 3911 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 IGKV2D-26A0A0A0MRZ7 120 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 IGHV1-58A0A0C4DH39 117 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 SPAARA0A1B0GVQ0 90 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 B4DSR2 109 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 J3KT08 172 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 CDK6Q00534 326 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 C1orf134Q5TEV5 83 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 CRYBG3Q68DQ2 2970 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 LINC00305Q7Z4B0 112 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 TEX29Q8N6K0 151 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 LXNQ9BS40 222 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 REG4Q9BYZ8 158 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 SPANXA1Q9NS26 97 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 RASL12Q9NYN1 266 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 DOCK2Q92608 1830 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 ATMQ13315 3056 aa1.77□□□□□ -2.13
CMSS1-207ENST00000494412 PKD1L1Q8TDX9 2849 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 TET1Q8NFU7 2136 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 NBASA2RRP1 2371 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 PATJQ8NI35 1801 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 TCRBV4S1A1TA0A5B7 111 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 OR2T8A6NH00 312 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 DEGS1O15121 323 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 CDK5R1Q15078 307 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 C4orf22Q6V702 233 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 FAM216BQ8N7L0 139 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 C15orf53Q8NAA6 179 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 TMEM229BQ8NBD8 167 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 OR5H6Q8NGV6 325 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 LAMA1P25391 3075 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 CEP192Q8TEP8 1941 aa1.76□□□□□ -2.13
CMSS1-207ENST00000494412 ZNF236Q9UL36 1845 aa1.75□□□□□ -2.13
CMSS1-207ENST00000494412 COL6A5A8TX70 2615 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms