RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SPXQ9BT56 116 aa6.11□□□□□ -1.43
ITGB1-217ENST00000494395 NAGKQ9UJ70 344 aa6.11□□□□□ -1.43
ITGB1-217ENST00000494395 ZFP30Q9Y2G7 519 aa6.11□□□□□ -1.43
ITGB1-217ENST00000494395 IGKV3D-20A0A0C4DH25 116 aa6.1□□□□□ -1.43
ITGB1-217ENST00000494395 H3BNG1 76 aa6.1□□□□□ -1.43
ITGB1-217ENST00000494395 RNASE3P12724 160 aaKnown RBP6.1□□□□□ -1.43
ITGB1-217ENST00000494395 NKX2-5P52952 324 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-217ENST00000494395 C11orf52Q96A22 123 aa6.1□□□□□ -1.43
ITGB1-217ENST00000494395 ZC2HC1AQ96GY0 325 aa6.1□□□□□ -1.43
ITGB1-217ENST00000494395 VSIG2Q96IQ7 327 aa6.1□□□□□ -1.43
ITGB1-217ENST00000494395 C9orf85Q96MD7 179 aa6.1□□□□□ -1.43
ITGB1-217ENST00000494395 MLST8Q9BVC4 326 aa6.1□□□□□ -1.43
ITGB1-217ENST00000494395 SDF2L1Q9HCN8 221 aa6.1□□□□□ -1.43
ITGB1-217ENST00000494395 MANBALQ9NQG1 85 aa6.1□□□□□ -1.43
ITGB1-217ENST00000494395 TRGV2A0A075B6R0 118 aa6.09□□□□□ -1.43
ITGB1-217ENST00000494395 TRAV26-1A0A087WT03 109 aa6.09□□□□□ -1.43
ITGB1-217ENST00000494395 GAGE12HA6NDE8 117 aa6.09□□□□□ -1.43
ITGB1-217ENST00000494395 FABP5P3A8MUU1 101 aa6.09□□□□□ -1.43
ITGB1-217ENST00000494395 F5H697 171 aa6.09□□□□□ -1.43
ITGB1-217ENST00000494395 M0R2P5 195 aa6.09□□□□□ -1.43
ITGB1-217ENST00000494395 AKR1C3P42330 323 aa6.09□□□□□ -1.43
ITGB1-217ENST00000494395 UBE2G1P62253 170 aa6.09□□□□□ -1.43
ITGB1-217ENST00000494395 FHL2Q14192 279 aa6.09□□□□□ -1.43
ITGB1-217ENST00000494395 ZNF674Q2M3X9 581 aa6.09□□□□□ -1.43
ITGB1-217ENST00000494395 RNF212Q495C1 297 aa6.09□□□□□ -1.43
ITGB1-217ENST00000494395 DNLZQ5SXM8 178 aa6.09□□□□□ -1.43
ITGB1-217ENST00000494395 ALKAL2Q6UX46 152 aa6.09□□□□□ -1.43
ITGB1-217ENST00000494395 GNG13Q9P2W3 67 aa6.09□□□□□ -1.43
ITGB1-217ENST00000494395 FRAS1Q86XX4 4008 aa6.09□□□□□ -1.44
ITGB1-217ENST00000494395 A0A0J9YY99 117 aa6.08□□□□□ -1.44
ITGB1-217ENST00000494395 SH2D1AO60880 128 aa6.08□□□□□ -1.44
ITGB1-217ENST00000494395 SFTA3P0C7M3 94 aa6.08□□□□□ -1.44
ITGB1-217ENST00000494395 OR5I1Q13606 314 aa6.08□□□□□ -1.44
ITGB1-217ENST00000494395 LYPD6BQ8NI32 183 aa6.08□□□□□ -1.44
ITGB1-217ENST00000494395 PTH2Q96A98 100 aa6.08□□□□□ -1.44
ITGB1-217ENST00000494395 ZNF479Q96JC4 524 aa6.08□□□□□ -1.44
ITGB1-217ENST00000494395 TXNDC17Q9BRA2 123 aa6.08□□□□□ -1.44
ITGB1-217ENST00000494395 DERL1Q9BUN8 251 aa6.08□□□□□ -1.44
ITGB1-217ENST00000494395 A0A096LPF7 62 aa6.07□□□□□ -1.44
ITGB1-217ENST00000494395 TRAV4A0A0B4J268 109 aa6.07□□□□□ -1.44
ITGB1-217ENST00000494395 PGPEP1LA6NFU8 196 aa6.07□□□□□ -1.44
ITGB1-217ENST00000494395 KRBOX1C9JBD0 128 aa6.07□□□□□ -1.44
ITGB1-217ENST00000494395 TRIAP1O43715 76 aa6.07□□□□□ -1.44
ITGB1-217ENST00000494395 NUDT3O95989 172 aa6.07□□□□□ -1.44
ITGB1-217ENST00000494395 IGLV2-8P01709 118 aa6.07□□□□□ -1.44
ITGB1-217ENST00000494395 IGHV3-53P01767 116 aa6.07□□□□□ -1.44
ITGB1-217ENST00000494395 S100A9P06702 114 aaKnown RBP6.07□□□□□ -1.44
ITGB1-217ENST00000494395 CRYBA4P53673 196 aa6.07□□□□□ -1.44
ITGB1-217ENST00000494395 FAM162BQ5T6X4 162 aa6.07□□□□□ -1.44
ITGB1-217ENST00000494395 PRO0255Q9UI72 69 aa6.07□□□□□ -1.44
ITGB1-217ENST00000494395 B4DEV8 164 aa6.06□□□□□ -1.44
ITGB1-217ENST00000494395 TEX46H3BTG2 121 aa6.06□□□□□ -1.44
ITGB1-217ENST00000494395 BCL2P10415 239 aa6.06□□□□□ -1.44
ITGB1-217ENST00000494395 RPL35P42766 123 aaKnown RBP6.06□□□□□ -1.44
ITGB1-217ENST00000494395 FAM3BP58499 235 aaPredicted RBP6.06□□□□□ -1.44
ITGB1-217ENST00000494395 MEF2BQ02080 365 aaPredicted RBP6.06□□□□□ -1.44
ITGB1-217ENST00000494395 ZNF506Q5JVG8 444 aa6.06□□□□□ -1.44
ITGB1-217ENST00000494395 PIK3CD-AS1Q5SR53 167 aa6.06□□□□□ -1.44
ITGB1-217ENST00000494395 Q6ZR54 194 aa6.06□□□□□ -1.44
ITGB1-217ENST00000494395 BAGE2Q86Y30 109 aa6.06□□□□□ -1.44
ITGB1-217ENST00000494395 NHLRC2Q8NBF2 726 aa6.06□□□□□ -1.44
ITGB1-217ENST00000494395 ZNRF2Q8NHG8 242 aa6.06□□□□□ -1.44
ITGB1-217ENST00000494395 IL36BQ9NZH7 164 aa6.06□□□□□ -1.44
ITGB1-217ENST00000494395 LINC00588Q9Y4M8 146 aa6.06□□□□□ -1.44
ITGB1-217ENST00000494395 TRBV20OR9-2A0A075B6H5 130 aa6.05□□□□□ -1.44
ITGB1-217ENST00000494395 RS1O15537 224 aa6.05□□□□□ -1.44
ITGB1-217ENST00000494395 IFNA1P01562 189 aa6.05□□□□□ -1.44
ITGB1-217ENST00000494395 GATA1P15976 413 aaPredicted RBP6.05□□□□□ -1.44
ITGB1-217ENST00000494395 ASIPP42127 132 aa6.05□□□□□ -1.44
ITGB1-217ENST00000494395 BLOC1S1P78537 153 aa6.05□□□□□ -1.44
ITGB1-217ENST00000494395 SLAQ13239 276 aa6.05□□□□□ -1.44
ITGB1-217ENST00000494395 ZNF876PQ49A33 203 aa6.05□□□□□ -1.44
ITGB1-217ENST00000494395 CFAP126Q5VTH2 177 aa6.05□□□□□ -1.44
ITGB1-217ENST00000494395 UBE2DNLQ8IWF7 75 aa6.05□□□□□ -1.44
ITGB1-217ENST00000494395 SCRT2Q9NQ03 307 aa6.05□□□□□ -1.44
ITGB1-217ENST00000494395 VAX2Q9UIW0 290 aa6.05□□□□□ -1.44
ITGB1-217ENST00000494395 HHLA3Q9XRX5 114 aa6.05□□□□□ -1.44
ITGB1-217ENST00000494395 DNAH10Q8IVF4 4471 aa6.05□□□□□ -1.44
ITGB1-217ENST00000494395 C9JCJ5 164 aa6.04□□□□□ -1.44
ITGB1-217ENST00000494395 H3BVH4 76 aa6.04□□□□□ -1.44
ITGB1-217ENST00000494395 M0R036 132 aa6.04□□□□□ -1.44
ITGB1-217ENST00000494395 PDE6DO43924 150 aa6.04□□□□□ -1.44
ITGB1-217ENST00000494395 TNFRSF6BO95407 300 aa6.04□□□□□ -1.44
ITGB1-217ENST00000494395 ORM1P02763 201 aa6.04□□□□□ -1.44
ITGB1-217ENST00000494395 CXCL1P09341 107 aa6.04□□□□□ -1.44
ITGB1-217ENST00000494395 TAGLN2P37802 199 aaKnown RBP6.04□□□□□ -1.44
ITGB1-217ENST00000494395 CCL18P55774 89 aa6.04□□□□□ -1.44
ITGB1-217ENST00000494395 ESRGQ1W209 222 aa6.04□□□□□ -1.44
ITGB1-217ENST00000494395 UFSP1Q6NVU6 142 aa6.04□□□□□ -1.44
ITGB1-217ENST00000494395 OR4C5Q8NGB2 326 aa6.04□□□□□ -1.44
ITGB1-217ENST00000494395 UPK3BQ9BT76 320 aa6.04□□□□□ -1.44
ITGB1-217ENST00000494395 ICOSQ9Y6W8 199 aa6.04□□□□□ -1.44
ITGB1-217ENST00000494395 IGLV2-18A0A075B6J9 118 aa6.03□□□□□ -1.44
ITGB1-217ENST00000494395 TRGV4A0A0C4DH28 118 aa6.03□□□□□ -1.44
ITGB1-217ENST00000494395 RAB19A4D1S5 217 aa6.03□□□□□ -1.44
ITGB1-217ENST00000494395 GRIFINA4D1Z8 144 aa6.03□□□□□ -1.44
ITGB1-217ENST00000494395 C19orf71A6NCJ1 209 aa6.03□□□□□ -1.44
ITGB1-217ENST00000494395 CIDEAO60543 219 aa6.03□□□□□ -1.44
ITGB1-217ENST00000494395 ARMS2P0C7Q2 107 aa6.03□□□□□ -1.44
ITGB1-217ENST00000494395 S100A4P26447 101 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms