RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 HLA-DRB4P13762 266 aa7.9□□□□□ -1.14
CLCN6-208ENST00000494028 GATA1P15976 413 aaPredicted RBP7.9□□□□□ -1.14
CLCN6-208ENST00000494028 BTF3P20290 206 aaKnown RBP7.9□□□□□ -1.14
CLCN6-208ENST00000494028 S100A4P26447 101 aaKnown RBP7.9□□□□□ -1.14
CLCN6-208ENST00000494028 DEFB131AP59861 70 aa7.9□□□□□ -1.14
CLCN6-208ENST00000494028 SPINK13Q1W4C9 94 aa7.9□□□□□ -1.14
CLCN6-208ENST00000494028 NRACQ8N912 160 aa7.9□□□□□ -1.14
CLCN6-208ENST00000494028 VAMP8Q9BV40 100 aa7.9□□□□□ -1.14
CLCN6-208ENST00000494028 TSSC4Q9Y5U2 329 aaPredicted RBP7.9□□□□□ -1.14
CLCN6-208ENST00000494028 HLA-DRB4X5D2U9 266 aa7.9□□□□□ -1.14
CLCN6-208ENST00000494028 TRAV12-2A0A075B6T6 113 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 TRAV12-3A0A0B4J271 114 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 LOC389332A0A1B0GUA5 103 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 LINC01546A6NGU7 62 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 CCL24O00175 119 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 GNRH2O43555 120 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 TCF21O43680 179 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 TNFRSF6BO95407 300 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 TSPOP30536 169 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 CDKN1BP46527 198 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 DEFB114Q30KQ6 69 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 TDRG1Q3Y452 100 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 SMIM15Q7Z3B0 74 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 PRSS3P2Q8NHM4 247 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 C9orf85Q96MD7 179 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 AP1S3Q96PC3 154 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 C20orf144Q9BQM9 153 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 PAM16Q9Y3D7 125 aa7.89□□□□□ -1.15
CLCN6-208ENST00000494028 IGLV2-18A0A075B6J9 118 aa7.88□□□□□ -1.15
CLCN6-208ENST00000494028 TRAV26-2A0A0B4J265 109 aa7.88□□□□□ -1.15
CLCN6-208ENST00000494028 ADARB2-AS1A8MUL3 147 aa7.88□□□□□ -1.15
CLCN6-208ENST00000494028 SYS1-DBNDD2H3BUS1 97 aa7.88□□□□□ -1.15
CLCN6-208ENST00000494028 RBMY1A1P0DJD3 496 aaKnown RBP7.88□□□□□ -1.15
CLCN6-208ENST00000494028 RBMY1CP0DJD4 496 aa7.88□□□□□ -1.15
CLCN6-208ENST00000494028 PROK1P58294 105 aa7.88□□□□□ -1.15
CLCN6-208ENST00000494028 RBMY1FQ15415 496 aaKnown RBP7.88□□□□□ -1.15
CLCN6-208ENST00000494028 CD300EQ496F6 205 aaPredicted RBP7.88□□□□□ -1.15
CLCN6-208ENST00000494028 FAM159AQ6UWV7 190 aa7.88□□□□□ -1.15
CLCN6-208ENST00000494028 OR2K2Q8NGT1 345 aa7.88□□□□□ -1.15
CLCN6-208ENST00000494028 MRAP2Q96G30 205 aa7.88□□□□□ -1.15
CLCN6-208ENST00000494028 SPAG8Q99932 426 aaPredicted RBP7.88□□□□□ -1.15
CLCN6-208ENST00000494028 NDUFAF3Q9BU61 184 aa7.88□□□□□ -1.15
CLCN6-208ENST00000494028 TMEM70Q9BUB7 260 aa7.88□□□□□ -1.15
CLCN6-208ENST00000494028 DPH3P1Q9H4G8 78 aa7.88□□□□□ -1.15
CLCN6-208ENST00000494028 HSPB8Q9UJY1 196 aa7.88□□□□□ -1.15
CLCN6-208ENST00000494028 PHLDA3Q9Y5J5 127 aa7.88□□□□□ -1.15
CLCN6-208ENST00000494028 TRAV25A0A0B4J276 109 aa7.87□□□□□ -1.15
CLCN6-208ENST00000494028 IGHV3-16A0A0C4DH30 117 aa7.87□□□□□ -1.15
CLCN6-208ENST00000494028 OR4C46A6NHA9 309 aa7.87□□□□□ -1.15
CLCN6-208ENST00000494028 H3BMM0 161 aa7.87□□□□□ -1.15
CLCN6-208ENST00000494028 CRXO43186 299 aaPredicted RBP7.87□□□□□ -1.15
CLCN6-208ENST00000494028 HBDP02042 147 aa7.87□□□□□ -1.15
CLCN6-208ENST00000494028 CTAG1AP78358 180 aa7.87□□□□□ -1.15
CLCN6-208ENST00000494028 ZNF124Q15973 351 aa7.87□□□□□ -1.15
CLCN6-208ENST00000494028 ODF3L2Q3SX64 289 aa7.87□□□□□ -1.15
CLCN6-208ENST00000494028 ATOH7Q8N100 152 aa7.87□□□□□ -1.15
CLCN6-208ENST00000494028 DEFB125Q8N687 156 aa7.87□□□□□ -1.15
CLCN6-208ENST00000494028 ZNF747Q9BV97 191 aa7.87□□□□□ -1.15
CLCN6-208ENST00000494028 ZNF256Q9Y2P7 627 aaPredicted RBP7.87□□□□□ -1.15
CLCN6-208ENST00000494028 NSD1Q96L73 2696 aaPredicted RBP7.86□□□□□ -1.15
CLCN6-208ENST00000494028 IGHV1OR15-1A0A075B7D0 117 aa7.86□□□□□ -1.15
CLCN6-208ENST00000494028 C20orf202A1L168 122 aa7.86□□□□□ -1.15
CLCN6-208ENST00000494028 CD7P09564 240 aa7.86□□□□□ -1.15
CLCN6-208ENST00000494028 SPATA45Q537H7 98 aa7.86□□□□□ -1.15
CLCN6-208ENST00000494028 POM121L12Q8N7R1 296 aa7.86□□□□□ -1.15
CLCN6-208ENST00000494028 C14orf144Q96I85 54 aa7.86□□□□□ -1.15
CLCN6-208ENST00000494028 JMJD8Q96S16 334 aa7.86□□□□□ -1.15
CLCN6-208ENST00000494028 NXT2Q9NPJ8 142 aaKnown RBP7.86□□□□□ -1.15
CLCN6-208ENST00000494028 KIF25-AS1Q9Y6Z4 181 aa7.86□□□□□ -1.15
CLCN6-208ENST00000494028 MTORP42345 2549 aa7.86□□□□□ -1.15
CLCN6-208ENST00000494028 TEP1Q99973 2627 aaKnown RBP7.85□□□□□ -1.15
CLCN6-208ENST00000494028 PRSS47A8MTI9 375 aa7.85□□□□□ -1.15
CLCN6-208ENST00000494028 MGPP08493 103 aa7.85□□□□□ -1.15
CLCN6-208ENST00000494028 FXYD7P58549 80 aa7.85□□□□□ -1.15
CLCN6-208ENST00000494028 DEFA6Q01524 100 aa7.85□□□□□ -1.15
CLCN6-208ENST00000494028 LINC01545Q5VT33 79 aa7.85□□□□□ -1.15
CLCN6-208ENST00000494028 PET117Q6UWS5 81 aa7.85□□□□□ -1.15
CLCN6-208ENST00000494028 Q8N8P6 123 aa7.85□□□□□ -1.15
CLCN6-208ENST00000494028 RASL10AQ92737 203 aa7.85□□□□□ -1.15
CLCN6-208ENST00000494028 SMIM2Q9BVW6 85 aa7.85□□□□□ -1.15
CLCN6-208ENST00000494028 MAP1LC3CQ9BXW4 147 aa7.85□□□□□ -1.15
CLCN6-208ENST00000494028 FN1P02751 2386 aaKnown RBP7.85□□□□□ -1.15
CLCN6-208ENST00000494028 TRGV11A0A075B6L2 103 aa7.84□□□□□ -1.15
CLCN6-208ENST00000494028 INAFM1C9JVW0 142 aa7.84□□□□□ -1.15
CLCN6-208ENST00000494028 FOSL1P15407 271 aa7.84□□□□□ -1.15
CLCN6-208ENST00000494028 LINC00315P59091 139 aa7.84□□□□□ -1.15
CLCN6-208ENST00000494028 KRTAP10-3P60369 221 aa7.84□□□□□ -1.15
CLCN6-208ENST00000494028 MAJINQ3KP22 176 aa7.84□□□□□ -1.15
CLCN6-208ENST00000494028 Q8N1Y9 231 aa7.84□□□□□ -1.15
CLCN6-208ENST00000494028 C14orf178Q8N769 122 aaPredicted RBP7.84□□□□□ -1.15
CLCN6-208ENST00000494028 MDFICQ9P1T7 246 aa7.84□□□□□ -1.15
CLCN6-208ENST00000494028 HIVEP2P31629 2446 aa7.83□□□□□ -1.16
CLCN6-208ENST00000494028 TRAV9-2A0A087WT02 112 aa7.83□□□□□ -1.16
CLCN6-208ENST00000494028 RPL39LQ96EH5 51 aaKnown RBP7.83□□□□□ -1.16
CLCN6-208ENST00000494028 CLUHP3Q96NS8 147 aa7.83□□□□□ -1.16
CLCN6-208ENST00000494028 EREGO14944 169 aa7.82□□□□□ -1.16
CLCN6-208ENST00000494028 FCER1GP30273 86 aa7.82□□□□□ -1.16
CLCN6-208ENST00000494028 SYT8Q8NBV8 401 aa7.82□□□□□ -1.16
CLCN6-208ENST00000494028 MCRIP2Q9BUT9 160 aaKnown RBP7.82□□□□□ -1.16
CLCN6-208ENST00000494028 JPT2Q9H910 190 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms