RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 SDIM1Q6ZPB5 146 aa6.1□□□□□ -1.43
BRCA1-221ENST00000493795 IL17DQ8TAD2 202 aa6.1□□□□□ -1.43
BRCA1-221ENST00000493795 TRPM3Q9HCF6 1732 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-221ENST00000493795 NHSL1Q5SYE7 1610 aa6.09□□□□□ -1.43
BRCA1-221ENST00000493795 LYRM9A8MSI8 78 aa6.09□□□□□ -1.43
BRCA1-221ENST00000493795 MIAQ16674 131 aa6.09□□□□□ -1.43
BRCA1-221ENST00000493795 LINC00173Q6ZV60 143 aa6.09□□□□□ -1.43
BRCA1-221ENST00000493795 FAM19A1Q7Z5A9 133 aa6.09□□□□□ -1.43
BRCA1-221ENST00000493795 ENHOQ6UWT2 76 aa6.09□□□□□ -1.43
BRCA1-221ENST00000493795 GTSF1Q8WW33 167 aa6.09□□□□□ -1.43
BRCA1-221ENST00000493795 CABIN1Q9Y6J0 2220 aa6.09□□□□□ -1.43
BRCA1-221ENST00000493795 IGHV4-30-2A0A087WSY4 118 aa6.09□□□□□ -1.44
BRCA1-221ENST00000493795 IGLC6P0CF74 106 aa6.09□□□□□ -1.44
BRCA1-221ENST00000493795 C1orf195Q5TG92 126 aa6.09□□□□□ -1.44
BRCA1-221ENST00000493795 NDUFA11Q86Y39 141 aa6.09□□□□□ -1.44
BRCA1-221ENST00000493795 IGKV2-24A0A0C4DH68 120 aa6.08□□□□□ -1.44
BRCA1-221ENST00000493795 KAAG1Q9UBP8 84 aa6.08□□□□□ -1.44
BRCA1-221ENST00000493795 K7ENP7 123 aa6.08□□□□□ -1.44
BRCA1-221ENST00000493795 C17orf82Q86X59 251 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-221ENST00000493795 Q8N9L7 120 aa6.08□□□□□ -1.44
BRCA1-221ENST00000493795 SCXQ7RTU7 201 aa6.08□□□□□ -1.44
BRCA1-221ENST00000493795 TCL1BO95988 128 aa6.08□□□□□ -1.44
BRCA1-221ENST00000493795 COA6Q5JTJ3 125 aaKnown RBP6.08□□□□□ -1.44
BRCA1-221ENST00000493795 LRCOL1A6NCL2 159 aa6.08□□□□□ -1.44
BRCA1-221ENST00000493795 AJUBAQ96IF1 538 aa6.08□□□□□ -1.44
BRCA1-221ENST00000493795 C20orf173Q96LM9 149 aa6.08□□□□□ -1.44
BRCA1-221ENST00000493795 ZNF318Q5VUA4 2279 aa6.07□□□□□ -1.44
BRCA1-221ENST00000493795 CDPF1Q6NVV7 123 aa6.07□□□□□ -1.44
BRCA1-221ENST00000493795 PTH2Q96A98 100 aa6.07□□□□□ -1.44
BRCA1-221ENST00000493795 MSRB1Q9NZV6 116 aa6.07□□□□□ -1.44
BRCA1-221ENST00000493795 A0A0J9YWU9 116 aa6.07□□□□□ -1.44
BRCA1-221ENST00000493795 CTSGP08311 255 aa6.07□□□□□ -1.44
BRCA1-221ENST00000493795 GBF1Q92538 1859 aa6.07□□□□□ -1.44
BRCA1-221ENST00000493795 ESPL1Q14674 2120 aa6.07□□□□□ -1.44
BRCA1-221ENST00000493795 TRIP12Q14669 1992 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-221ENST00000493795 PTPRFP10586 1907 aa6.07□□□□□ -1.44
BRCA1-221ENST00000493795 KIAA1217Q5T5P2 1943 aa6.07□□□□□ -1.44
BRCA1-221ENST00000493795 RP1P56715 2156 aa6.07□□□□□ -1.44
BRCA1-221ENST00000493795 A0A096LNI7 61 aa6.07□□□□□ -1.44
BRCA1-221ENST00000493795 DOCK4Q8N1I0 1966 aa6.06□□□□□ -1.44
BRCA1-221ENST00000493795 CENPVL3A0A0U1RRI6 287 aa6.06□□□□□ -1.44
BRCA1-221ENST00000493795 TMEM263Q8WUH6 116 aaKnown RBP6.06□□□□□ -1.44
BRCA1-221ENST00000493795 APC2O95996 2303 aa6.06□□□□□ -1.44
BRCA1-221ENST00000493795 TDRD6O60522 2096 aaKnown RBP6.06□□□□□ -1.44
BRCA1-221ENST00000493795 A0A087WZ39 114 aa6.06□□□□□ -1.44
BRCA1-221ENST00000493795 FHL1Q13642 323 aa6.06□□□□□ -1.44
BRCA1-221ENST00000493795 SCN2AQ99250 2005 aa6.06□□□□□ -1.44
BRCA1-221ENST00000493795 STRCQ7RTU9 1775 aa6.06□□□□□ -1.44
BRCA1-221ENST00000493795 PIK3CD-AS1Q5SR53 167 aa6.06□□□□□ -1.44
BRCA1-221ENST00000493795 TTTY13Q9BZ97 58 aa6.06□□□□□ -1.44
BRCA1-221ENST00000493795 IGKV1-17P01599 117 aa6.06□□□□□ -1.44
BRCA1-221ENST00000493795 MAP1BP46821 2468 aaKnown RBP6.06□□□□□ -1.44
BRCA1-221ENST00000493795 ZNF236Q9UL36 1845 aa6.06□□□□□ -1.44
BRCA1-221ENST00000493795 I3L2K1 104 aa6.06□□□□□ -1.44
BRCA1-221ENST00000493795 TIMM17BO60830 172 aa6.06□□□□□ -1.44
BRCA1-221ENST00000493795 IGLV1-44P01699 117 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 DEFB135Q30KP9 77 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 MDFICQ9P1T7 246 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 PRO0255Q9UI72 69 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 SPTBP11277 2137 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 IGKV1D-37A0A075B6S9 117 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 Q8N9W7 124 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 C9orf85Q96MD7 179 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 ARFGEF1Q9Y6D6 1849 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 MT-ATP8P03928 68 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 MYCNOSP40205 109 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 IGFL3Q6UXB1 125 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 SMAD5-AS1Q9Y6J3 95 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 AHCTF1Q8WYP5 2266 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 LOXL1Q08397 574 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-221ENST00000493795 ODF1Q14990 250 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 SERP2Q8N6R1 65 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 PSME4Q14997 1843 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 LRRK1Q38SD2 2015 aa6.05□□□□□ -1.44
BRCA1-221ENST00000493795 WT1P19544 449 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-221ENST00000493795 C20orf203Q8NBC4 194 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 IGLV11-55A0A075B6I3 123 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 UBE2D1P51668 147 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 FAM19A3Q7Z5A8 133 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 PRSS33Q8NF86 280 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 MCM3APO60318 1980 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 TRBV10-1A0A0K0K1A3 114 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 C2orf70A6NJV1 201 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 BLCAPP62952 87 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 ZFAND2AQ8N6M9 145 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 LYPD6BQ8NI32 183 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 C1orf147Q96MC9 270 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-221ENST00000493795 ZNF706Q9Y5V0 76 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-221ENST00000493795 IGHV7-81A0A0B4J1V7 117 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 K7EMT4 169 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 DEFB4AO15263 64 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 NUPR1O60356 82 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 CTRLP40313 264 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 DOCK5Q9H7D0 1870 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 A0A0J9YXY3 114 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 TRBV6-1A0A0K0K1D8 114 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 C4orf3Q8WVX3 66 aa6.04□□□□□ -1.44
BRCA1-221ENST00000493795 TRBV27A0A0K0K1C4 114 aa6.03□□□□□ -1.44
BRCA1-221ENST00000493795 REG3AQ06141 175 aa6.03□□□□□ -1.44
BRCA1-221ENST00000493795 C7orf33Q8WU49 177 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms