RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 H3BRM9 83 aa7.24□□□□□ -1.25
NPHP3-209ENST00000493732 K7EQG2 157 aa7.24□□□□□ -1.25
NPHP3-209ENST00000493732 CCL25O15444 150 aa7.24□□□□□ -1.25
NPHP3-209ENST00000493732 GNRH2O43555 120 aa7.24□□□□□ -1.25
NPHP3-209ENST00000493732 MGPP08493 103 aa7.24□□□□□ -1.25
NPHP3-209ENST00000493732 OR4C5Q8NGB2 326 aa7.24□□□□□ -1.25
NPHP3-209ENST00000493732 SCGB3A1Q96QR1 104 aa7.24□□□□□ -1.25
NPHP3-209ENST00000493732 A0A0J9YX75 114 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 F8VRH5 84 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 ZC2HC1BQ5TFG8 222 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 ADAMTSL5Q6ZMM2 481 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 NRGNQ92686 78 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 TP73-AS1Q9UF72 201 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 VCYO14598 125 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 CD7P09564 240 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 IGHV4-31P0DP07 118 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 SRD5A1P18405 259 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 CDKN1BP46527 198 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 DEFB113Q30KQ7 82 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 FOXI2Q6ZQN5 318 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 ERASQ7Z444 233 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 TMEM160Q9NX00 188 aa7.23□□□□□ -1.25
NPHP3-209ENST00000493732 MRPL35Q9NZE8 188 aaKnown RBP7.23□□□□□ -1.25
NPHP3-209ENST00000493732 TRAV2A0A0B4J234 112 aa7.22□□□□□ -1.25
NPHP3-209ENST00000493732 RNF223E7ERA6 249 aa7.22□□□□□ -1.25
NPHP3-209ENST00000493732 DEFB1P60022 68 aa7.22□□□□□ -1.25
NPHP3-209ENST00000493732 TAL2Q16559 108 aa7.22□□□□□ -1.25
NPHP3-209ENST00000493732 PAPPA-AS1Q5QFB9 102 aa7.22□□□□□ -1.25
NPHP3-209ENST00000493732 PCP2Q8IVA1 136 aa7.22□□□□□ -1.25
NPHP3-209ENST00000493732 KIR2DL4Q99706 377 aa7.22□□□□□ -1.25
NPHP3-209ENST00000493732 ZNF702PQ9H963 129 aa7.22□□□□□ -1.25
NPHP3-209ENST00000493732 KIF25-AS1Q9Y6Z4 181 aa7.22□□□□□ -1.25
NPHP3-209ENST00000493732 TRAV12-3A0A0B4J271 114 aa7.21□□□□□ -1.25
NPHP3-209ENST00000493732 C9orf118A6NHY6 69 aa7.21□□□□□ -1.25
NPHP3-209ENST00000493732 CBY3A6NI87 242 aa7.21□□□□□ -1.25
NPHP3-209ENST00000493732 K7EP13 123 aa7.21□□□□□ -1.25
NPHP3-209ENST00000493732 ZNF688P0C7X2 276 aa7.21□□□□□ -1.25
NPHP3-209ENST00000493732 HOXD3P31249 432 aaPredicted RBP7.21□□□□□ -1.25
NPHP3-209ENST00000493732 SYNJ2BPP57105 145 aa7.21□□□□□ -1.25
NPHP3-209ENST00000493732 C2orf66Q6UXQ4 117 aa7.21□□□□□ -1.25
NPHP3-209ENST00000493732 GTF2H5Q6ZYL4 71 aa7.21□□□□□ -1.25
NPHP3-209ENST00000493732 Q8N2B8 174 aa7.21□□□□□ -1.25
NPHP3-209ENST00000493732 C9orf85Q96MD7 179 aa7.21□□□□□ -1.25
NPHP3-209ENST00000493732 CSTL1Q9H114 145 aa7.21□□□□□ -1.25
NPHP3-209ENST00000493732 PEMTQ9UBM1 199 aa7.21□□□□□ -1.25
NPHP3-209ENST00000493732 CYSLTR1Q9Y271 337 aa7.21□□□□□ -1.25
NPHP3-209ENST00000493732 TRGV11A0A075B6L2 103 aa7.21□□□□□ -1.26
NPHP3-209ENST00000493732 IGHV1OR15-1A0A075B7D0 117 aa7.21□□□□□ -1.26
NPHP3-209ENST00000493732 TRBV6-5A0A0K0K1A5 114 aa7.21□□□□□ -1.26
NPHP3-209ENST00000493732 TMEM86BQ8N661 226 aa7.21□□□□□ -1.26
NPHP3-209ENST00000493732 NEXN-AS1Q8NBZ9 246 aa7.21□□□□□ -1.26
NPHP3-209ENST00000493732 RPL39LQ96EH5 51 aaKnown RBP7.21□□□□□ -1.26
NPHP3-209ENST00000493732 SPG11Q96JI7 2443 aa7.2□□□□□ -1.26
NPHP3-209ENST00000493732 IGHV3-16A0A0C4DH30 117 aa7.2□□□□□ -1.26
NPHP3-209ENST00000493732 HOXA3O43365 443 aaPredicted RBP7.2□□□□□ -1.26
NPHP3-209ENST00000493732 LINC00315P59091 139 aa7.2□□□□□ -1.26
NPHP3-209ENST00000493732 Q6ZVH6 145 aa7.2□□□□□ -1.26
NPHP3-209ENST00000493732 GTSCR1Q86UQ5 136 aa7.2□□□□□ -1.26
NPHP3-209ENST00000493732 ZNF843Q8N446 348 aa7.2□□□□□ -1.26
NPHP3-209ENST00000493732 TMEM141Q96I45 108 aa7.2□□□□□ -1.26
NPHP3-209ENST00000493732 F5H697 171 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 LINC01619G3V211 115 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 SMIM13P0DJ93 91 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 POLR2KP53803 58 aaKnown RBP7.19□□□□□ -1.26
NPHP3-209ENST00000493732 Q5PR19 223 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 AMMECR1LQ6DCA0 310 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 CHAC1Q9BUX1 264 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 ASH1LQ9NR48 2969 aaKnown RBP7.19□□□□□ -1.26
NPHP3-209ENST00000493732 CFAP46Q8IYW2 2715 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 TRBV25-1A0A075B6N4 114 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 IGKV2D-26A0A0A0MRZ7 120 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 GAGE10A6NGK3 116 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 OR11H12B2RN74 326 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 SUMO4Q6EEV6 95 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 C10orf99Q6UWK7 81 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 OR11H1Q8NG94 326 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 OR11H2Q8NH07 326 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 WFDC12Q8WWY7 111 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 TM2D2Q9BX73 214 aa7.19□□□□□ -1.26
NPHP3-209ENST00000493732 IGSF10Q6WRI0 2623 aa7.18□□□□□ -1.26
NPHP3-209ENST00000493732 TRBV27A0A0K0K1C4 114 aa7.18□□□□□ -1.26
NPHP3-209ENST00000493732 EDN2P20800 178 aa7.18□□□□□ -1.26
NPHP3-209ENST00000493732 TCTEX1D4Q5JR98 221 aa7.18□□□□□ -1.26
NPHP3-209ENST00000493732 TRPT1Q86TN4 253 aaKnown RBP7.18□□□□□ -1.26
NPHP3-209ENST00000493732 BAALCQ8WXS3 180 aa7.18□□□□□ -1.26
NPHP3-209ENST00000493732 TIMM17AQ99595 171 aa7.18□□□□□ -1.26
NPHP3-209ENST00000493732 USP9XQ93008 2570 aaPredicted RBP7.18□□□□□ -1.26
NPHP3-209ENST00000493732 PRB1P04280 392 aa7.17□□□□□ -1.26
NPHP3-209ENST00000493732 GCSHP23434 173 aa7.17□□□□□ -1.26
NPHP3-209ENST00000493732 RIPPLY3P57055 190 aa7.17□□□□□ -1.26
NPHP3-209ENST00000493732 TCTAP57738 103 aa7.17□□□□□ -1.26
NPHP3-209ENST00000493732 HERVK_113P61574 105 aa7.17□□□□□ -1.26
NPHP3-209ENST00000493732 RHOHQ15669 191 aa7.17□□□□□ -1.26
NPHP3-209ENST00000493732 PIK3CD-AS1Q5SR53 167 aa7.17□□□□□ -1.26
NPHP3-209ENST00000493732 ZFP2Q6ZN57 461 aa7.17□□□□□ -1.26
NPHP3-209ENST00000493732 Q8N1Y9 231 aa7.17□□□□□ -1.26
NPHP3-209ENST00000493732 C4orf3Q8WVX3 66 aa7.17□□□□□ -1.26
NPHP3-209ENST00000493732 JMJD8Q96S16 334 aa7.17□□□□□ -1.26
NPHP3-209ENST00000493732 ACACBO00763 2458 aa7.17□□□□□ -1.26
NPHP3-209ENST00000493732 SDHAF1A6NFY7 115 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms