RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 IL7P13232 177 aa-0.37□□□□□ -2.47
SYCP1-208ENST00000493377 ELOF1P60002 83 aaKnown RBP-0.37□□□□□ -2.47
SYCP1-208ENST00000493377 HRCT1Q6UXD1 115 aa-0.37□□□□□ -2.47
SYCP1-208ENST00000493377 STX12Q86Y82 276 aa-0.37□□□□□ -2.47
SYCP1-208ENST00000493377 TEX29Q8N6K0 151 aa-0.37□□□□□ -2.47
SYCP1-208ENST00000493377 OTOSQ8NHW6 89 aa-0.37□□□□□ -2.47
SYCP1-208ENST00000493377 PPDPFLQ8WWR9 84 aa-0.37□□□□□ -2.47
SYCP1-208ENST00000493377 COA4Q9NYJ1 87 aa-0.37□□□□□ -2.47
SYCP1-208ENST00000493377 ATPIF1Q9UII2 106 aa-0.37□□□□□ -2.47
SYCP1-208ENST00000493377 SSC5DA1L4H1 1573 aa-0.37□□□□□ -2.47
SYCP1-208ENST00000493377 CASZ1Q86V15 1759 aa-0.37□□□□□ -2.47
SYCP1-208ENST00000493377 LRP2P98164 4655 aa-0.37□□□□□ -2.47
SYCP1-208ENST00000493377 HSPG2P98160 4391 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 CSMD3Q7Z407 3707 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 IGHV1-24A0A0C4DH33 117 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 PNMA8CA0A1B0GUJ8 204 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 C9JAW5 83 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 E5RI56 91 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 F2Z2F3 143 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 CKS2P33552 79 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 BASP1P80723 227 aaKnown RBP-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 KRTAP19-8Q3LI54 63 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 TRIQKQ629K1 86 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 TOMM20LQ6UXN7 152 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 NDUFA11Q86Y39 141 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 TMEM141Q96I45 108 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 VPS25Q9BRG1 176 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 MED23Q9ULK4 1368 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 SPTBN2O15020 2390 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 LPAP08519 4548 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 AKAP6Q13023 2319 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 PTPRQQ9UMZ3 2332 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 PHIPQ8WWQ0 1821 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 ARHGAP31Q2M1Z3 1444 aa-0.38□□□□□ -2.47
SYCP1-208ENST00000493377 APOC1P02654 83 aa-0.39□□□□□ -2.47
SYCP1-208ENST00000493377 POLR2JP52435 117 aaKnown RBP-0.39□□□□□ -2.47
SYCP1-208ENST00000493377 UNQ5815/PRO19632Q6UWF5 114 aa-0.39□□□□□ -2.47
SYCP1-208ENST00000493377 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.39□□□□□ -2.47
SYCP1-208ENST00000493377 OR9Q1Q8NGQ5 310 aa-0.39□□□□□ -2.47
SYCP1-208ENST00000493377 GID8Q9NWU2 228 aa-0.39□□□□□ -2.47
SYCP1-208ENST00000493377 METTL1Q9UBP6 276 aaKnown RBP-0.39□□□□□ -2.47
SYCP1-208ENST00000493377 SMPXQ9UHP9 88 aa-0.39□□□□□ -2.47
SYCP1-208ENST00000493377 PARP14Q460N5 1801 aa-0.39□□□□□ -2.47
SYCP1-208ENST00000493377 SRRM2Q9UQ35 2752 aaKnown RBP-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 PTPN13Q12923 2485 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 UHRF1BP1LA0JNW5 1464 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 PKDREJQ9NTG1 2253 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 TNXBP22105 4242 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 A0A087WTM6 91 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 SLC25A5P05141 298 aaKnown RBP-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 NMBP08949 121 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 RPL7P18124 248 aaKnown RBP-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 PLGLB1Q02325 96 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 IQCJQ1A5X6 159 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 HSD17B12Q53GQ0 312 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 OR2T2Q6IF00 324 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 SMIM11BQ8TCY0 68 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 CCDC115Q96NT0 180 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 PCBD2Q9H0N5 130 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 TAS2R8Q9NYW2 309 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 NDUFAF1Q9Y375 327 aa-0.4□□□□□ -2.47
SYCP1-208ENST00000493377 ARAP1Q96P48 1450 aa-0.41□□□□□ -2.47
SYCP1-208ENST00000493377 C2CD3Q4AC94 2353 aa-0.41□□□□□ -2.47
SYCP1-208ENST00000493377 TRAV17A0A0B4J275 112 aa-0.41□□□□□ -2.48
SYCP1-208ENST00000493377 RBAKDNA6NC62 111 aa-0.41□□□□□ -2.48
SYCP1-208ENST00000493377 M0QZK8 103 aa-0.41□□□□□ -2.48
SYCP1-208ENST00000493377 HIST1H1BP16401 226 aaKnown RBP-0.41□□□□□ -2.48
SYCP1-208ENST00000493377 AKR1D1P51857 326 aa-0.41□□□□□ -2.48
SYCP1-208ENST00000493377 OR8B8Q15620 311 aa-0.41□□□□□ -2.48
SYCP1-208ENST00000493377 SLC25A26Q70HW3 274 aa-0.41□□□□□ -2.48
SYCP1-208ENST00000493377 BRK1Q8WUW1 75 aa-0.41□□□□□ -2.48
SYCP1-208ENST00000493377 TRAPPC2LQ9UL33 140 aa-0.41□□□□□ -2.48
SYCP1-208ENST00000493377 CCDC171Q6TFL3 1326 aa-0.41□□□□□ -2.48
SYCP1-208ENST00000493377 PCLOQ9Y6V0 5065 aa-0.41□□□□□ -2.48
SYCP1-208ENST00000493377 PTPRMP28827 1452 aa-0.41□□□□□ -2.48
SYCP1-208ENST00000493377 KMT2CQ8NEZ4 4911 aaKnown RBP-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 MYH13Q9UKX3 1938 aa-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 ZNF670-ZNF695F2Z2N8 137 aa-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 TCRAP04437 139 aa-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 CCL3L1P16619 93 aa-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 SPRR2DP22532 72 aa-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 PCBD1P61457 104 aa-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 RPS28P62857 69 aaKnown RBP-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 SSBP1Q04837 148 aaKnown RBP-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 CDC26Q8NHZ8 85 aa-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 CYP4F30PQ9H0H9 118 aa-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 CENPHQ9H3R5 247 aa-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 BIVM-ERCC5R4GMW8 1640 aa-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 SIPA1L3O60292 1781 aaPredicted RBP-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 ZANQ9Y493 2812 aa-0.42□□□□□ -2.48
SYCP1-208ENST00000493377 MYH9P35579 1960 aaKnown RBP-0.43□□□□□ -2.48
SYCP1-208ENST00000493377 FLNAP21333 2647 aaKnown RBP-0.43□□□□□ -2.48
SYCP1-208ENST00000493377 NRXN2Q9P2S2 1712 aa-0.43□□□□□ -2.48
SYCP1-208ENST00000493377 APODP05090 189 aa-0.43□□□□□ -2.48
SYCP1-208ENST00000493377 MT4P47944 62 aa-0.43□□□□□ -2.48
SYCP1-208ENST00000493377 GNG10P50151 68 aa-0.43□□□□□ -2.48
SYCP1-208ENST00000493377 PSPHP78330 225 aa-0.43□□□□□ -2.48
SYCP1-208ENST00000493377 TFAMQ00059 246 aaKnown RBP-0.43□□□□□ -2.48
SYCP1-208ENST00000493377 TMEM91Q6ZNR0 172 aa-0.43□□□□□ -2.48
SYCP1-208ENST00000493377 Q96NJ1 140 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms