RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 SPATA12Q7Z6I5 190 aa7.82□□□□□ -1.16
LRTM1-202ENST00000493075 LINC00479Q96M42 142 aa7.82□□□□□ -1.16
LRTM1-202ENST00000493075 TRAV34A0A0B4J273 112 aa7.81□□□□□ -1.16
LRTM1-202ENST00000493075 PEX7O00628 323 aa7.81□□□□□ -1.16
LRTM1-202ENST00000493075 RNASE3P12724 160 aaKnown RBP7.81□□□□□ -1.16
LRTM1-202ENST00000493075 EVI2AP22794 236 aa7.81□□□□□ -1.16
LRTM1-202ENST00000493075 FHITP49789 147 aa7.81□□□□□ -1.16
LRTM1-202ENST00000493075 ZNF345Q14585 488 aa7.81□□□□□ -1.16
LRTM1-202ENST00000493075 KCNRGQ8N5I3 272 aa7.81□□□□□ -1.16
LRTM1-202ENST00000493075 STOML3Q8TAV4 291 aa7.81□□□□□ -1.16
LRTM1-202ENST00000493075 TCEAL7Q9BRU2 100 aa7.81□□□□□ -1.16
LRTM1-202ENST00000493075 PRADC1Q9BSG0 188 aa7.81□□□□□ -1.16
LRTM1-202ENST00000493075 ZFP30Q9Y2G7 519 aa7.81□□□□□ -1.16
LRTM1-202ENST00000493075 ARL2-SNX15V9GYD0 113 aa7.81□□□□□ -1.16
LRTM1-202ENST00000493075 RYR1P21817 5038 aa7.81□□□□□ -1.16
LRTM1-202ENST00000493075 IGKV3D-20A0A0C4DH25 116 aa7.8□□□□□ -1.16
LRTM1-202ENST00000493075 LOC100131303A0A0U1RQF7 123 aa7.8□□□□□ -1.16
LRTM1-202ENST00000493075 MAP1LC3B2A6NCE7 125 aa7.8□□□□□ -1.16
LRTM1-202ENST00000493075 PGPEP1LA6NFU8 196 aa7.8□□□□□ -1.16
LRTM1-202ENST00000493075 HMSDA8MTL9 139 aa7.8□□□□□ -1.16
LRTM1-202ENST00000493075 FGF8P55075 233 aaPredicted RBP7.8□□□□□ -1.16
LRTM1-202ENST00000493075 UBE2G2P60604 165 aa7.8□□□□□ -1.16
LRTM1-202ENST00000493075 DPPA3Q6W0C5 159 aa7.8□□□□□ -1.16
LRTM1-202ENST00000493075 SLC25A29Q8N8R3 303 aa7.8□□□□□ -1.16
LRTM1-202ENST00000493075 MAP1LC3BQ9GZQ8 125 aa7.8□□□□□ -1.16
LRTM1-202ENST00000493075 TRBV6-1A0A0K0K1D8 114 aa7.79□□□□□ -1.16
LRTM1-202ENST00000493075 SEC11BP0C7V7 166 aa7.79□□□□□ -1.16
LRTM1-202ENST00000493075 MGST1P10620 155 aaKnown RBP7.79□□□□□ -1.16
LRTM1-202ENST00000493075 KRTAP10-2P60368 255 aa7.79□□□□□ -1.16
LRTM1-202ENST00000493075 RHOHQ15669 191 aa7.79□□□□□ -1.16
LRTM1-202ENST00000493075 ZNF506Q5JVG8 444 aa7.79□□□□□ -1.16
LRTM1-202ENST00000493075 DNLZQ5SXM8 178 aa7.79□□□□□ -1.16
LRTM1-202ENST00000493075 ZFP2Q6ZN57 461 aa7.79□□□□□ -1.16
LRTM1-202ENST00000493075 Q86TA4 180 aa7.79□□□□□ -1.16
LRTM1-202ENST00000493075 WFDC10BQ8IUB3 73 aa7.79□□□□□ -1.16
LRTM1-202ENST00000493075 C10orf126Q8N4M7 172 aa7.79□□□□□ -1.16
LRTM1-202ENST00000493075 NHLRC2Q8NBF2 726 aa7.79□□□□□ -1.16
LRTM1-202ENST00000493075 FMC1Q96HJ9 113 aa7.79□□□□□ -1.16
LRTM1-202ENST00000493075 LRP1BQ9NZR2 4599 aa7.79□□□□□ -1.16
LRTM1-202ENST00000493075 A0A0D9SG52 128 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 A8MWV9 139 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 UMAD1C9J7I0 102 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 S100A4P26447 101 aaKnown RBP7.78□□□□□ -1.16
LRTM1-202ENST00000493075 ASIPP42127 132 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 CRIP1P50238 77 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 ERVFC1-1P60608 527 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 MBD3L1Q8WWY6 194 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 IL36BQ9NZH7 164 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 MSRB1Q9NZV6 116 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 TNFRSF18Q9Y5U5 241 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 IGHV3-38A0A0C4DH36 116 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 KRBOX1C9JBD0 128 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 SMLR1H3BR10 107 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 CRYGDP07320 174 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 LINC00528Q8N1L1 170 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 ZC2HC1AQ96GY0 325 aa7.78□□□□□ -1.16
LRTM1-202ENST00000493075 IGHV3-73A0A0B4J1V6 119 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 TRAV8-6A0A0B4J262 113 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 B4DEV8 164 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 LTAP01374 205 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 S100A9P06702 114 aaKnown RBP7.77□□□□□ -1.17
LRTM1-202ENST00000493075 LORP23490 312 aaPredicted RBP7.77□□□□□ -1.17
LRTM1-202ENST00000493075 UBE2G1P62253 170 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 EIF5AP63241 154 aaKnown RBP7.77□□□□□ -1.17
LRTM1-202ENST00000493075 ZNF674Q2M3X9 581 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 LGALSLQ3ZCW2 172 aaPredicted RBP7.77□□□□□ -1.17
LRTM1-202ENST00000493075 LINC01556Q5JQF7 62 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 FAM162BQ5T6X4 162 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 LELP1Q5T871 98 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 CST9LP1Q5W188 147 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 CDPF1Q6NVV7 123 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 OR11H4Q8NGC9 324 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 SFT2D1Q8WV19 159 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 GTSF1LQ9H1H1 148 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 PARLQ9H300 379 aa7.77□□□□□ -1.17
LRTM1-202ENST00000493075 PCLOQ9Y6V0 5065 aa7.76□□□□□ -1.17
LRTM1-202ENST00000493075 A0A087WTM6 91 aa7.76□□□□□ -1.17
LRTM1-202ENST00000493075 SH2D1AO60880 128 aa7.76□□□□□ -1.17
LRTM1-202ENST00000493075 ARMS2P0C7Q2 107 aa7.76□□□□□ -1.17
LRTM1-202ENST00000493075 UFSP1Q6NVU6 142 aa7.76□□□□□ -1.17
LRTM1-202ENST00000493075 SYT8Q8NBV8 401 aa7.76□□□□□ -1.17
LRTM1-202ENST00000493075 ATP6V0E2Q8NHE4 81 aa7.76□□□□□ -1.17
LRTM1-202ENST00000493075 KANTRA0A1W2PQU2 76 aa7.75□□□□□ -1.17
LRTM1-202ENST00000493075 PRSS47A8MTI9 375 aa7.75□□□□□ -1.17
LRTM1-202ENST00000493075 IBA57-AS1B1ANH7 110 aa7.75□□□□□ -1.17
LRTM1-202ENST00000493075 BCL2L11O43521 198 aa7.75□□□□□ -1.17
LRTM1-202ENST00000493075 PAGE4O60829 102 aa7.75□□□□□ -1.17
LRTM1-202ENST00000493075 ODF1Q14990 250 aa7.75□□□□□ -1.17
LRTM1-202ENST00000493075 OR10J3Q5JRS4 329 aa7.75□□□□□ -1.17
LRTM1-202ENST00000493075 Q6ZSN1 163 aa7.75□□□□□ -1.17
LRTM1-202ENST00000493075 FAM213BQ8TBF2 198 aa7.75□□□□□ -1.17
LRTM1-202ENST00000493075 ZNF471Q9BX82 626 aaPredicted RBP7.75□□□□□ -1.17
LRTM1-202ENST00000493075 SCRT2Q9NQ03 307 aa7.75□□□□□ -1.17
LRTM1-202ENST00000493075 DNAH5Q8TE73 4624 aa7.75□□□□□ -1.17
LRTM1-202ENST00000493075 HSPG2P98160 4391 aa7.74□□□□□ -1.17
LRTM1-202ENST00000493075 RHODO00212 210 aa7.74□□□□□ -1.17
LRTM1-202ENST00000493075 AKR1C3P42330 323 aa7.74□□□□□ -1.17
LRTM1-202ENST00000493075 MAPKAPK5-AS1Q8N8E1 139 aa7.74□□□□□ -1.17
LRTM1-202ENST00000493075 KRTAP4-5Q9BYR2 181 aa7.74□□□□□ -1.17
LRTM1-202ENST00000493075 GRIFINA4D1Z8 144 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms