RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 TAX1BP3O14907 124 aa9.35□□□□□ -0.91
HMGN1-220ENST00000492280 PSMB8P28062 276 aa9.35□□□□□ -0.91
HMGN1-220ENST00000492280 PTTG1IPP53801 180 aa9.35□□□□□ -0.91
HMGN1-220ENST00000492280 ODF1Q14990 250 aa9.35□□□□□ -0.91
HMGN1-220ENST00000492280 HIST2H2BCQ6DN03 193 aa9.35□□□□□ -0.91
HMGN1-220ENST00000492280 GTSCR1Q86UQ5 136 aa9.35□□□□□ -0.91
HMGN1-220ENST00000492280 PPBPP02775 128 aa9.35□□□□□ -0.91
HMGN1-220ENST00000492280 SMIM17P0DL12 118 aa9.35□□□□□ -0.91
HMGN1-220ENST00000492280 FCER1GP30273 86 aa9.35□□□□□ -0.91
HMGN1-220ENST00000492280 LINC01356Q8N9X3 169 aa9.35□□□□□ -0.91
HMGN1-220ENST00000492280 MS4A6AQ9H2W1 248 aa9.35□□□□□ -0.91
HMGN1-220ENST00000492280 TRAV21A0A0B4J279 112 aa9.34□□□□□ -0.91
HMGN1-220ENST00000492280 A0A0G2JLM5 398 aa9.34□□□□□ -0.91
HMGN1-220ENST00000492280 RNASE3P12724 160 aaKnown RBP9.34□□□□□ -0.91
HMGN1-220ENST00000492280 VAMP3Q15836 100 aa9.34□□□□□ -0.91
HMGN1-220ENST00000492280 NXT2Q9NPJ8 142 aaKnown RBP9.34□□□□□ -0.91
HMGN1-220ENST00000492280 A0A087WWL8 130 aa9.34□□□□□ -0.91
HMGN1-220ENST00000492280 ASIPP42127 132 aa9.34□□□□□ -0.91
HMGN1-220ENST00000492280 Q8N8P6 123 aa9.34□□□□□ -0.91
HMGN1-220ENST00000492280 DCANP1Q8TF63 244 aa9.34□□□□□ -0.91
HMGN1-220ENST00000492280 LINC00477Q96M19 166 aa9.34□□□□□ -0.91
HMGN1-220ENST00000492280 TMEM160Q9NX00 188 aa9.34□□□□□ -0.91
HMGN1-220ENST00000492280 IGHV4OR15-8A0A075B7B6 117 aa9.33□□□□□ -0.92
HMGN1-220ENST00000492280 A0A087WW49 117 aa9.33□□□□□ -0.92
HMGN1-220ENST00000492280 OVOL1O14753 267 aa9.33□□□□□ -0.92
HMGN1-220ENST00000492280 HOXA3O43365 443 aaPredicted RBP9.33□□□□□ -0.92
HMGN1-220ENST00000492280 GAGE1Q13065 139 aa9.33□□□□□ -0.92
HMGN1-220ENST00000492280 RASL10AQ92737 203 aa9.33□□□□□ -0.92
HMGN1-220ENST00000492280 SETXQ7Z333 2677 aaKnown RBP9.33□□□□□ -0.92
HMGN1-220ENST00000492280 H3BUA1 57 aa9.33□□□□□ -0.92
HMGN1-220ENST00000492280 MRPL35Q9NZE8 188 aaKnown RBP9.33□□□□□ -0.92
HMGN1-220ENST00000492280 PRM2P04554 102 aa9.33□□□□□ -0.92
HMGN1-220ENST00000492280 ZC2HC1BQ5TFG8 222 aa9.32□□□□□ -0.92
HMGN1-220ENST00000492280 FAM74A4Q5TZK3 123 aa9.32□□□□□ -0.92
HMGN1-220ENST00000492280 CD7P09564 240 aa9.32□□□□□ -0.92
HMGN1-220ENST00000492280 HTN1P15515 57 aa9.32□□□□□ -0.92
HMGN1-220ENST00000492280 LAGE3Q14657 143 aa9.32□□□□□ -0.92
HMGN1-220ENST00000492280 SPINK13Q1W4C9 94 aa9.32□□□□□ -0.92
HMGN1-220ENST00000492280 DPF1Q92782 380 aa9.32□□□□□ -0.92
HMGN1-220ENST00000492280 RAB37Q96AX2 223 aa9.32□□□□□ -0.92
HMGN1-220ENST00000492280 TRAV8-6A0A0B4J262 113 aa9.31□□□□□ -0.92
HMGN1-220ENST00000492280 SLC25A16P16260 332 aa9.31□□□□□ -0.92
HMGN1-220ENST00000492280 DSCR9P59020 149 aa9.31□□□□□ -0.92
HMGN1-220ENST00000492280 KHDC1LQ5JSQ8 128 aa9.31□□□□□ -0.92
HMGN1-220ENST00000492280 SMIM2Q9BVW6 85 aa9.31□□□□□ -0.92
HMGN1-220ENST00000492280 BOD1L2Q8IYS8 172 aa9.31□□□□□ -0.92
HMGN1-220ENST00000492280 DEFB125Q8N687 156 aa9.31□□□□□ -0.92
HMGN1-220ENST00000492280 ORAOV1Q8WV07 137 aa9.31□□□□□ -0.92
HMGN1-220ENST00000492280 FAM19A4Q96LR4 140 aa9.31□□□□□ -0.92
HMGN1-220ENST00000492280 ATP6V0BQ99437 205 aa9.31□□□□□ -0.92
HMGN1-220ENST00000492280 HHLA3Q9XRX5 114 aa9.31□□□□□ -0.92
HMGN1-220ENST00000492280 HECTD1Q9ULT8 2610 aa9.3□□□□□ -0.92
HMGN1-220ENST00000492280 SLURP1P55000 103 aa9.3□□□□□ -0.92
HMGN1-220ENST00000492280 TMEM97Q5BJF2 176 aa9.3□□□□□ -0.92
HMGN1-220ENST00000492280 Q5PR19 223 aa9.3□□□□□ -0.92
HMGN1-220ENST00000492280 AMMECR1LQ6DCA0 310 aa9.3□□□□□ -0.92
HMGN1-220ENST00000492280 C12orf54Q6X4T0 127 aa9.3□□□□□ -0.92
HMGN1-220ENST00000492280 C11orf44Q8N8P7 122 aa9.3□□□□□ -0.92
HMGN1-220ENST00000492280 FASNP49327 2511 aaKnown RBP9.3□□□□□ -0.92
HMGN1-220ENST00000492280 IGHV4-31P0DP07 118 aa9.3□□□□□ -0.92
HMGN1-220ENST00000492280 EMP1P54849 157 aa9.3□□□□□ -0.92
HMGN1-220ENST00000492280 SUMO2P61956 95 aaKnown RBP9.3□□□□□ -0.92
HMGN1-220ENST00000492280 DPH3P1Q9H4G8 78 aa9.3□□□□□ -0.92
HMGN1-220ENST00000492280 PPP1R14DQ9NXH3 145 aa9.3□□□□□ -0.92
HMGN1-220ENST00000492280 MDFICQ9P1T7 246 aa9.3□□□□□ -0.92
HMGN1-220ENST00000492280 IGKCP01834 107 aa9.29□□□□□ -0.92
HMGN1-220ENST00000492280 HOXD3P31249 432 aaPredicted RBP9.29□□□□□ -0.92
HMGN1-220ENST00000492280 ZNF702PQ9H963 129 aa9.29□□□□□ -0.92
HMGN1-220ENST00000492280 VPREB3Q9UKI3 123 aa9.29□□□□□ -0.92
HMGN1-220ENST00000492280 LENEPQ9Y5L5 61 aa9.29□□□□□ -0.92
HMGN1-220ENST00000492280 IGHV4-4A0A075B6R2 117 aa9.29□□□□□ -0.92
HMGN1-220ENST00000492280 GATA3P23771 443 aa9.29□□□□□ -0.92
HMGN1-220ENST00000492280 UBE2V1Q13404 147 aa9.29□□□□□ -0.92
HMGN1-220ENST00000492280 FAM159AQ6UWV7 190 aa9.29□□□□□ -0.92
HMGN1-220ENST00000492280 Q96MF0 132 aa9.29□□□□□ -0.92
HMGN1-220ENST00000492280 F5H697 171 aa9.28□□□□□ -0.92
HMGN1-220ENST00000492280 LINC01546A6NGU7 62 aa9.28□□□□□ -0.92
HMGN1-220ENST00000492280 KLLNB2CW77 178 aa9.28□□□□□ -0.92
HMGN1-220ENST00000492280 MYOZ3Q8TDC0 251 aa9.28□□□□□ -0.92
HMGN1-220ENST00000492280 OR4C5Q8NGB2 326 aa9.27□□□□□ -0.92
HMGN1-220ENST00000492280 AP1S3Q96PC3 154 aa9.27□□□□□ -0.92
HMGN1-220ENST00000492280 JMJD8Q96S16 334 aa9.27□□□□□ -0.92
HMGN1-220ENST00000492280 KNCNA6PVL3 124 aa9.27□□□□□ -0.93
HMGN1-220ENST00000492280 K7ERJ3 54 aa9.27□□□□□ -0.93
HMGN1-220ENST00000492280 ADAMTSL5Q6ZMM2 481 aa9.27□□□□□ -0.93
HMGN1-220ENST00000492280 RNASE8Q8TDE3 154 aaKnown RBP9.27□□□□□ -0.93
HMGN1-220ENST00000492280 CSTL1Q9H114 145 aa9.27□□□□□ -0.93
HMGN1-220ENST00000492280 DPM2O94777 84 aa9.26□□□□□ -0.93
HMGN1-220ENST00000492280 GCSHP23434 173 aa9.26□□□□□ -0.93
HMGN1-220ENST00000492280 ID1P41134 155 aa9.26□□□□□ -0.93
HMGN1-220ENST00000492280 MAPKAPK5-AS1Q8N8E1 139 aa9.26□□□□□ -0.93
HMGN1-220ENST00000492280 DUSP14O95147 198 aaKnown RBP9.26□□□□□ -0.93
HMGN1-220ENST00000492280 BRI3O95415 125 aa9.26□□□□□ -0.93
HMGN1-220ENST00000492280 RPL39P62891 51 aaKnown RBP9.26□□□□□ -0.93
HMGN1-220ENST00000492280 Q8N1Y9 231 aa9.26□□□□□ -0.93
HMGN1-220ENST00000492280 OR1N2Q8NGR9 330 aa9.26□□□□□ -0.93
HMGN1-220ENST00000492280 MRAP2Q96G30 205 aa9.26□□□□□ -0.93
HMGN1-220ENST00000492280 SCGB3A1Q96QR1 104 aa9.26□□□□□ -0.93
HMGN1-220ENST00000492280 UNC79Q9P2D8 2635 aa9.26□□□□□ -0.93
HMGN1-220ENST00000492280 FXYD2P54710 66 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 244 ms