RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 IGKV3D-20A0A0C4DH25 116 aa5.61□□□□□ -1.51
SMARCB1-207ENST00000491967 PGPEP1LA6NFU8 196 aa5.61□□□□□ -1.51
SMARCB1-207ENST00000491967 G3V3Q6 166 aa5.61□□□□□ -1.51
SMARCB1-207ENST00000491967 SMLR1H3BR10 107 aa5.61□□□□□ -1.51
SMARCB1-207ENST00000491967 K7EQM0 130 aa5.61□□□□□ -1.51
SMARCB1-207ENST00000491967 CRYGDP07320 174 aa5.61□□□□□ -1.51
SMARCB1-207ENST00000491967 SMUG1Q53HV7 270 aa5.61□□□□□ -1.51
SMARCB1-207ENST00000491967 ZNF506Q5JVG8 444 aa5.61□□□□□ -1.51
SMARCB1-207ENST00000491967 ZFP2Q6ZN57 461 aa5.61□□□□□ -1.51
SMARCB1-207ENST00000491967 PRADC1Q9BSG0 188 aa5.61□□□□□ -1.51
SMARCB1-207ENST00000491967 ACTR3CQ9C0K3 210 aaPredicted RBP5.61□□□□□ -1.51
SMARCB1-207ENST00000491967 MGST1P10620 155 aaKnown RBP5.6□□□□□ -1.51
SMARCB1-207ENST00000491967 FUSP35637 526 aaKnown RBP eCLIP5.6□□□□□ -1.51
SMARCB1-207ENST00000491967 CRIP1P50238 77 aa5.6□□□□□ -1.51
SMARCB1-207ENST00000491967 RHOHQ15669 191 aa5.6□□□□□ -1.51
SMARCB1-207ENST00000491967 LELP1Q5T871 98 aa5.6□□□□□ -1.51
SMARCB1-207ENST00000491967 RPL7L1Q6DKI1 246 aaKnown RBP5.6□□□□□ -1.51
SMARCB1-207ENST00000491967 Q6ZSN1 163 aa5.6□□□□□ -1.51
SMARCB1-207ENST00000491967 LINC00479Q96M42 142 aa5.6□□□□□ -1.51
SMARCB1-207ENST00000491967 NKX6-2Q9C056 277 aaPredicted RBP5.6□□□□□ -1.51
SMARCB1-207ENST00000491967 GTSF1LQ9H1H1 148 aa5.6□□□□□ -1.51
SMARCB1-207ENST00000491967 HERC1Q15751 4861 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 DMBT1Q9UGM3 2413 aaPredicted RBP5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 TRAV8-6A0A0B4J262 113 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 CTXND1A0A1B0GTU2 59 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 FAM74A7A6NL05 159 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 FABP5P3A8MUU1 101 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 EPM2AB3EWF7 344 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 GCSHP23434 173 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 LAGE3Q14657 143 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 PRNTQ86SH4 94 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 NHLRC2Q8NBF2 726 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 INO80EQ8NBZ0 244 aaPredicted RBP5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 OR2T35Q8NGX2 323 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 NTN5Q8WTR8 489 aaPredicted RBP5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 HIST1H2BAQ96A08 127 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 PARLQ9H300 379 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 CYTL1Q9NRR1 136 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 IL36BQ9NZH7 164 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 ARL2-SNX15V9GYD0 113 aa5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 FLG2Q5D862 2391 aaPredicted RBP5.59□□□□□ -1.51
SMARCB1-207ENST00000491967 SRRM2Q9UQ35 2752 aaKnown RBP5.58□□□□□ -1.52
SMARCB1-207ENST00000491967 FAT1Q14517 4588 aa5.58□□□□□ -1.52
SMARCB1-207ENST00000491967 FXYD6-FXYD2A0A087WZ82 144 aa5.58□□□□□ -1.52
SMARCB1-207ENST00000491967 BORCS7-ASMTA0A0B4J1R7 106 aa5.58□□□□□ -1.52
SMARCB1-207ENST00000491967 TRAV34A0A0B4J273 112 aa5.58□□□□□ -1.52
SMARCB1-207ENST00000491967 TRBV6-1A0A0K0K1D8 114 aa5.58□□□□□ -1.52
SMARCB1-207ENST00000491967 A8MWV9 139 aa5.58□□□□□ -1.52
SMARCB1-207ENST00000491967 FHITP49789 147 aa5.58□□□□□ -1.52
SMARCB1-207ENST00000491967 ZFP69Q49AA0 526 aa5.58□□□□□ -1.52
SMARCB1-207ENST00000491967 ATP6V0E2Q8NHE4 81 aa5.58□□□□□ -1.52
SMARCB1-207ENST00000491967 Q9UF83 564 aa5.58□□□□□ -1.52
SMARCB1-207ENST00000491967 IGHV3-73A0A0B4J1V6 119 aa5.57□□□□□ -1.52
SMARCB1-207ENST00000491967 KRBOX1C9JBD0 128 aa5.57□□□□□ -1.52
SMARCB1-207ENST00000491967 PEX7O00628 323 aa5.57□□□□□ -1.52
SMARCB1-207ENST00000491967 C1QBP02746 253 aa5.57□□□□□ -1.52
SMARCB1-207ENST00000491967 PPT1P50897 306 aa5.57□□□□□ -1.52
SMARCB1-207ENST00000491967 ZNF674Q2M3X9 581 aa5.57□□□□□ -1.52
SMARCB1-207ENST00000491967 DMRTA1Q5VZB9 504 aa5.57□□□□□ -1.52
SMARCB1-207ENST00000491967 Q86TA4 180 aa5.57□□□□□ -1.52
SMARCB1-207ENST00000491967 AKAP14Q86UN6 197 aa5.57□□□□□ -1.52
SMARCB1-207ENST00000491967 Q8N814 137 aa5.57□□□□□ -1.52
SMARCB1-207ENST00000491967 TCEAL7Q9BRU2 100 aa5.57□□□□□ -1.52
SMARCB1-207ENST00000491967 TMEM70Q9BUB7 260 aa5.57□□□□□ -1.52
SMARCB1-207ENST00000491967 SAMD10Q9BYL1 202 aa5.57□□□□□ -1.52
SMARCB1-207ENST00000491967 ZFP30Q9Y2G7 519 aa5.57□□□□□ -1.52
SMARCB1-207ENST00000491967 LTAP01374 205 aa5.56□□□□□ -1.52
SMARCB1-207ENST00000491967 ASIPP42127 132 aa5.56□□□□□ -1.52
SMARCB1-207ENST00000491967 LINC01559Q495D7 138 aa5.56□□□□□ -1.52
SMARCB1-207ENST00000491967 OR10J3Q5JRS4 329 aa5.56□□□□□ -1.52
SMARCB1-207ENST00000491967 ZC2HC1AQ96GY0 325 aa5.56□□□□□ -1.52
SMARCB1-207ENST00000491967 FMC1Q96HJ9 113 aa5.56□□□□□ -1.52
SMARCB1-207ENST00000491967 JPT2Q9H910 190 aa5.56□□□□□ -1.52
SMARCB1-207ENST00000491967 VPS13BQ7Z7G8 4022 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 A0A087WWC5 75 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 B4DEV8 164 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 RHODO00212 210 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 ARPC5O15511 151 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 IFNA7P01567 189 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 ARMS2P0C7Q2 107 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 FGF8P55075 233 aaPredicted RBP5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 AKR1C8PQ5T2L2 129 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 Q5VSD8 79 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 Q6ZSA8 131 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 TCTE3Q8IZS6 198 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 Q8N3U1 123 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 C14orf178Q8N769 122 aaPredicted RBP5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 OR11H4Q8NGC9 324 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 MBD3L1Q8WWY6 194 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 SFRP2Q96HF1 295 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 TM2D2Q9BX73 214 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 UBR4Q5T4S7 5183 aa5.55□□□□□ -1.52
SMARCB1-207ENST00000491967 IGLV5-52A0A0A0MRZ9 124 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 TRAV8-3A0A0A6YYJ7 113 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 MAP1LC3B2A6NCE7 125 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 SH2D1AO60880 128 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 PFDN1O60925 122 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 IGHV3-30P01768 117 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 IGHV3-33P01772 117 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 INAFM2P0DMQ5 153 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms