RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 GNPDA2Q8TDQ7 276 aa0.82□□□□□ -2.28
VTA1-204ENST00000491881 SLAMF6Q96DU3 332 aa0.82□□□□□ -2.28
VTA1-204ENST00000491881 ADAT3Q96EY9 351 aaPredicted RBP0.82□□□□□ -2.28
VTA1-204ENST00000491881 SCN3AQ9NY46 2000 aa0.82□□□□□ -2.28
VTA1-204ENST00000491881 DNAH8Q96JB1 4490 aa0.82□□□□□ -2.28
VTA1-204ENST00000491881 OR7C1O76099 320 aaPredicted RBP0.81□□□□□ -2.28
VTA1-204ENST00000491881 GADD45GO95257 159 aa0.81□□□□□ -2.28
VTA1-204ENST00000491881 ZNF25P17030 456 aaPredicted RBP0.81□□□□□ -2.28
VTA1-204ENST00000491881 ERP29P30040 261 aaKnown RBP0.81□□□□□ -2.28
VTA1-204ENST00000491881 DYNLT1P63172 113 aa0.81□□□□□ -2.28
VTA1-204ENST00000491881 FAM74A1Q5RGS3 127 aa0.81□□□□□ -2.28
VTA1-204ENST00000491881 Q5VSD8 79 aa0.81□□□□□ -2.28
VTA1-204ENST00000491881 SLC30A7Q8NEW0 376 aa0.81□□□□□ -2.28
VTA1-204ENST00000491881 OR2T35Q8NGX2 323 aa0.81□□□□□ -2.28
VTA1-204ENST00000491881 PPTC7Q8NI37 304 aa0.81□□□□□ -2.28
VTA1-204ENST00000491881 BORCS5Q969J3 196 aa0.81□□□□□ -2.28
VTA1-204ENST00000491881 PRADC1Q9BSG0 188 aa0.81□□□□□ -2.28
VTA1-204ENST00000491881 FREM3P0C091 2139 aa0.8□□□□□ -2.28
VTA1-204ENST00000491881 SPEF2Q9C093 1822 aa0.8□□□□□ -2.28
VTA1-204ENST00000491881 MCM3APO60318 1980 aa0.8□□□□□ -2.28
VTA1-204ENST00000491881 MYH10P35580 1976 aa0.8□□□□□ -2.28
VTA1-204ENST00000491881 DNAL4O96015 105 aa0.8□□□□□ -2.28
VTA1-204ENST00000491881 SRIP30626 198 aa0.8□□□□□ -2.28
VTA1-204ENST00000491881 TFF3Q07654 80 aa0.8□□□□□ -2.28
VTA1-204ENST00000491881 KRR1Q13601 381 aaKnown RBP0.8□□□□□ -2.28
VTA1-204ENST00000491881 KRTAP19-6Q3LI70 58 aa0.8□□□□□ -2.28
VTA1-204ENST00000491881 TMEM254Q8TBM7 123 aa0.8□□□□□ -2.28
VTA1-204ENST00000491881 TMEM133Q9H2Q1 129 aa0.8□□□□□ -2.28
VTA1-204ENST00000491881 KTN1Q86UP2 1357 aaKnown RBP0.8□□□□□ -2.28
VTA1-204ENST00000491881 KIAA1549LQ6ZVL6 1849 aa0.8□□□□□ -2.28
VTA1-204ENST00000491881 TNCP24821 2201 aa0.79□□□□□ -2.28
VTA1-204ENST00000491881 TRGV10A0A0A0MS01 117 aa0.79□□□□□ -2.28
VTA1-204ENST00000491881 DHFRP00374 187 aa0.79□□□□□ -2.28
VTA1-204ENST00000491881 PIGPP57054 158 aa0.79□□□□□ -2.28
VTA1-204ENST00000491881 EIF3IQ13347 325 aaKnown RBP0.79□□□□□ -2.28
VTA1-204ENST00000491881 DEFB109BQ30KR1 87 aa0.79□□□□□ -2.28
VTA1-204ENST00000491881 LIN52Q52LA3 116 aa0.79□□□□□ -2.28
VTA1-204ENST00000491881 AKIRIN2Q53H80 203 aa0.79□□□□□ -2.28
VTA1-204ENST00000491881 PRAP1Q96NZ9 151 aa0.79□□□□□ -2.28
VTA1-204ENST00000491881 AMELYQ99218 206 aa0.79□□□□□ -2.28
VTA1-204ENST00000491881 GPER1Q99527 375 aa0.79□□□□□ -2.28
VTA1-204ENST00000491881 UCK1Q9HA47 277 aa0.79□□□□□ -2.28
VTA1-204ENST00000491881 PARVBQ9HBI1 364 aa0.79□□□□□ -2.28
VTA1-204ENST00000491881 LINC00846Q9NV44 126 aa0.79□□□□□ -2.28
VTA1-204ENST00000491881 FAM32AQ9Y421 112 aaKnown RBP0.79□□□□□ -2.28
VTA1-204ENST00000491881 ANK1P16157 1881 aa0.78□□□□□ -2.28
VTA1-204ENST00000491881 TCRBV4S1A1TA0A5B7 111 aa0.78□□□□□ -2.28
VTA1-204ENST00000491881 TIMM17BO60830 172 aa0.78□□□□□ -2.28
VTA1-204ENST00000491881 LY6G6CO95867 125 aa0.78□□□□□ -2.28
VTA1-204ENST00000491881 SERPINB9P50453 376 aa0.78□□□□□ -2.28
VTA1-204ENST00000491881 OR11H6Q8NGC7 330 aa0.78□□□□□ -2.28
VTA1-204ENST00000491881 STAG3L4Q8TBR4 150 aa0.78□□□□□ -2.28
VTA1-204ENST00000491881 YPEL2Q96QA6 119 aa0.78□□□□□ -2.28
VTA1-204ENST00000491881 TLNRD1Q9H1K6 362 aa0.78□□□□□ -2.28
VTA1-204ENST00000491881 ENY2Q9NPA8 101 aa0.78□□□□□ -2.28
VTA1-204ENST00000491881 CCL25O15444 150 aa0.77□□□□□ -2.29
VTA1-204ENST00000491881 CCL16O15467 120 aa0.77□□□□□ -2.29
VTA1-204ENST00000491881 RNASE4P34096 147 aaKnown RBP0.77□□□□□ -2.29
VTA1-204ENST00000491881 REEP5Q00765 189 aa0.77□□□□□ -2.29
VTA1-204ENST00000491881 RRN3P1Q2M238 152 aa0.77□□□□□ -2.29
VTA1-204ENST00000491881 DEFB121Q5J5C9 76 aa0.77□□□□□ -2.29
VTA1-204ENST00000491881 BCL2L15Q5TBC7 163 aa0.77□□□□□ -2.29
VTA1-204ENST00000491881 PDZD9Q8IXQ8 264 aa0.77□□□□□ -2.29
VTA1-204ENST00000491881 Q8IYB0 196 aa0.77□□□□□ -2.29
VTA1-204ENST00000491881 LINC00467Q9BRT7 94 aa0.77□□□□□ -2.29
VTA1-204ENST00000491881 IMUPQ9GZP8 106 aa0.77□□□□□ -2.29
VTA1-204ENST00000491881 ARL2BPQ9Y2Y0 163 aa0.77□□□□□ -2.29
VTA1-204ENST00000491881 MYO5AQ9Y4I1 1855 aaKnown RBP0.77□□□□□ -2.29
VTA1-204ENST00000491881 FOCADQ5VW36 1801 aa0.76□□□□□ -2.29
VTA1-204ENST00000491881 TRBV19A0A075B6N1 114 aa0.76□□□□□ -2.29
VTA1-204ENST00000491881 TRAV4A0A0B4J268 109 aa0.76□□□□□ -2.29
VTA1-204ENST00000491881 NCR3O14931 201 aa0.76□□□□□ -2.29
VTA1-204ENST00000491881 NDUFB3O43676 98 aa0.76□□□□□ -2.29
VTA1-204ENST00000491881 CST8O60676 142 aa0.76□□□□□ -2.29
VTA1-204ENST00000491881 C22orf39Q6P5X5 142 aa0.76□□□□□ -2.29
VTA1-204ENST00000491881 C2orf82Q6UX34 121 aa0.76□□□□□ -2.29
VTA1-204ENST00000491881 SLC25A21Q9BQT8 299 aaPredicted RBP0.76□□□□□ -2.29
VTA1-204ENST00000491881 MRPL40Q9NQ50 206 aaKnown RBP0.76□□□□□ -2.29
VTA1-204ENST00000491881 TMEM14CQ9P0S9 112 aa0.76□□□□□ -2.29
VTA1-204ENST00000491881 TRBV6-4A0A1B0GX49 114 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 A8MWV9 139 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 S100A6P06703 90 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 CTXN2P0C2S0 81 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 PSG9Q00887 426 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 MYL5Q02045 173 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 FADDQ13158 208 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 GKN2Q86XP6 184 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 PATE1Q8WXA2 126 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 TP53RKQ96S44 253 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 TMEM126AQ9H061 195 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 TAS2R7Q9NYW3 318 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 OPTCQ9UBM4 332 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 LY96Q9Y6Y9 160 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 NUP210LQ5VU65 1888 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 KIF20BQ96Q89 1820 aa0.75□□□□□ -2.29
VTA1-204ENST00000491881 PLIN4Q96Q06 1357 aa0.74□□□□□ -2.29
VTA1-204ENST00000491881 A0A096LNT2 108 aa0.74□□□□□ -2.29
VTA1-204ENST00000491881 FAM159BA6NKW6 160 aa0.74□□□□□ -2.29
VTA1-204ENST00000491881 HMGB3O15347 200 aaKnown RBP0.74□□□□□ -2.29
VTA1-204ENST00000491881 E2F6O75461 281 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms