RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 LINC01556Q5JQF7 62 aa8.76□□□□□ -1.01
USF1-206ENST00000491629 GCSAMLQ5JQS6 135 aa8.76□□□□□ -1.01
USF1-206ENST00000491629 MUC21Q5SSG8 566 aa8.76□□□□□ -1.01
USF1-206ENST00000491629 Q6ZRG5 221 aa8.76□□□□□ -1.01
USF1-206ENST00000491629 OR1L4Q8NGR5 311 aa8.76□□□□□ -1.01
USF1-206ENST00000491629 Q8TAT8 98 aa8.76□□□□□ -1.01
USF1-206ENST00000491629 BLNKQ8WV28 456 aa8.76□□□□□ -1.01
USF1-206ENST00000491629 Q9HAA7 133 aa8.76□□□□□ -1.01
USF1-206ENST00000491629 SLC39A9Q9NUM3 307 aa8.76□□□□□ -1.01
USF1-206ENST00000491629 GSKIPQ9P0R6 139 aa8.76□□□□□ -1.01
USF1-206ENST00000491629 CST7O76096 145 aa8.75□□□□□ -1.01
USF1-206ENST00000491629 ORM1P02763 201 aa8.75□□□□□ -1.01
USF1-206ENST00000491629 RPL29P47914 159 aaKnown RBP8.75□□□□□ -1.01
USF1-206ENST00000491629 PDE6HQ13956 83 aa8.75□□□□□ -1.01
USF1-206ENST00000491629 VWC2Q2TAL6 325 aa8.75□□□□□ -1.01
USF1-206ENST00000491629 FAM167A-AS1Q96KT0 104 aa8.75□□□□□ -1.01
USF1-206ENST00000491629 YPEL4Q96NS1 127 aa8.75□□□□□ -1.01
USF1-206ENST00000491629 TIRAPP58753 221 aa8.74□□□□□ -1.01
USF1-206ENST00000491629 LINC01620Q4KN68 170 aa8.74□□□□□ -1.01
USF1-206ENST00000491629 TMEM78Q5T7P6 136 aa8.74□□□□□ -1.01
USF1-206ENST00000491629 Q8N3U1 123 aa8.74□□□□□ -1.01
USF1-206ENST00000491629 INO80EQ8NBZ0 244 aaPredicted RBP8.74□□□□□ -1.01
USF1-206ENST00000491629 TXNDC17Q9BRA2 123 aa8.74□□□□□ -1.01
USF1-206ENST00000491629 SLC25A2Q9BXI2 301 aa8.74□□□□□ -1.01
USF1-206ENST00000491629 SMDT1Q9H4I9 107 aa8.74□□□□□ -1.01
USF1-206ENST00000491629 TIMM9Q9Y5J7 89 aa8.74□□□□□ -1.01
USF1-206ENST00000491629 TRAV4A0A0B4J268 109 aa8.73□□□□□ -1.01
USF1-206ENST00000491629 FAM24AA6NFZ4 105 aa8.73□□□□□ -1.01
USF1-206ENST00000491629 C9JCJ5 164 aa8.73□□□□□ -1.01
USF1-206ENST00000491629 CCSO14618 274 aa8.73□□□□□ -1.01
USF1-206ENST00000491629 FGF7P21781 194 aa8.73□□□□□ -1.01
USF1-206ENST00000491629 TMEM183BQ1AE95 376 aa8.73□□□□□ -1.01
USF1-206ENST00000491629 SCXQ7RTU7 201 aa8.73□□□□□ -1.01
USF1-206ENST00000491629 TMEM183AQ8IXX5 376 aa8.73□□□□□ -1.01
USF1-206ENST00000491629 HSD17B11Q8NBQ5 300 aa8.73□□□□□ -1.01
USF1-206ENST00000491629 SYT8Q8NBV8 401 aa8.73□□□□□ -1.01
USF1-206ENST00000491629 LYPD6BQ8NI32 183 aa8.73□□□□□ -1.01
USF1-206ENST00000491629 IGHV3-16A0A0C4DH30 117 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 C7orf77A4D0Y5 90 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 IFITM10A6NMD0 228 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 DLEU1O43261 78 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 IGHV3-30P01768 117 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 IGHV3-33P01772 117 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 IGHV3-30-3P0DP02 117 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 IGHV3-30-5P0DP03 117 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 GATA1P15976 413 aaPredicted RBP8.72□□□□□ -1.01
USF1-206ENST00000491629 ZNF138P52744 262 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 RAB31Q13636 194 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 ZNF266Q14584 549 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 MITD1Q8WV92 249 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 SPXQ9BT56 116 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 RPS10P5Q9NQ39 176 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 PLA2G2DQ9UNK4 145 aa8.72□□□□□ -1.01
USF1-206ENST00000491629 CHTOPQ9Y3Y2 248 aaKnown RBP8.72□□□□□ -1.01
USF1-206ENST00000491629 TRBV7-9A0A0J9YWB2 115 aa8.71□□□□□ -1.02
USF1-206ENST00000491629 UBE2L5PA0A1B0GUS4 154 aa8.71□□□□□ -1.02
USF1-206ENST00000491629 IGSF23A1L1A6 192 aa8.71□□□□□ -1.02
USF1-206ENST00000491629 TAAR5O14804 337 aa8.71□□□□□ -1.02
USF1-206ENST00000491629 LECT2O14960 151 aa8.71□□□□□ -1.02
USF1-206ENST00000491629 SRSF3P84103 164 aaKnown RBP8.71□□□□□ -1.02
USF1-206ENST00000491629 CYCSP99999 105 aaKnown RBP8.71□□□□□ -1.02
USF1-206ENST00000491629 Q6AWC8 147 aa8.71□□□□□ -1.02
USF1-206ENST00000491629 HIST3H2BBQ8N257 126 aa8.71□□□□□ -1.02
USF1-206ENST00000491629 ACTR3CQ9C0K3 210 aaPredicted RBP8.71□□□□□ -1.02
USF1-206ENST00000491629 SLC25A31Q9H0C2 315 aa8.71□□□□□ -1.02
USF1-206ENST00000491629 AAMDCQ9H7C9 122 aa8.71□□□□□ -1.02
USF1-206ENST00000491629 CYTL1Q9NRR1 136 aa8.71□□□□□ -1.02
USF1-206ENST00000491629 LSM5Q9Y4Y9 91 aaKnown RBP8.71□□□□□ -1.02
USF1-206ENST00000491629 A0A087WWC5 75 aa8.7□□□□□ -1.02
USF1-206ENST00000491629 GNRH2O43555 120 aa8.7□□□□□ -1.02
USF1-206ENST00000491629 OXTP01178 125 aa8.7□□□□□ -1.02
USF1-206ENST00000491629 NBEAP1P0C6P0 100 aa8.7□□□□□ -1.02
USF1-206ENST00000491629 SULT1A2P50226 295 aa8.7□□□□□ -1.02
USF1-206ENST00000491629 BAXQ07812 192 aa8.7□□□□□ -1.02
USF1-206ENST00000491629 JOSD1Q15040 202 aaPredicted RBP8.7□□□□□ -1.02
USF1-206ENST00000491629 C21orf62-AS1Q17RA5 79 aa8.7□□□□□ -1.02
USF1-206ENST00000491629 MIR17HGQ75NE6 70 aa8.7□□□□□ -1.02
USF1-206ENST00000491629 NHLRC2Q8NBF2 726 aa8.7□□□□□ -1.02
USF1-206ENST00000491629 OR4C5Q8NGB2 326 aa8.7□□□□□ -1.02
USF1-206ENST00000491629 FXYD5Q96DB9 178 aa8.7□□□□□ -1.02
USF1-206ENST00000491629 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.69□□□□□ -1.02
USF1-206ENST00000491629 M0R143 59 aa8.69□□□□□ -1.02
USF1-206ENST00000491629 PPP1R2P9O14990 202 aa8.69□□□□□ -1.02
USF1-206ENST00000491629 VAMP2P63027 116 aa8.69□□□□□ -1.02
USF1-206ENST00000491629 TDRG1Q3Y452 100 aa8.69□□□□□ -1.02
USF1-206ENST00000491629 SLC25A29Q8N8R3 303 aa8.69□□□□□ -1.02
USF1-206ENST00000491629 OR10D4PQ8NGN7 298 aa8.69□□□□□ -1.02
USF1-206ENST00000491629 OR10J4P0C629 311 aa8.68□□□□□ -1.02
USF1-206ENST00000491629 SULT1A1P50225 295 aa8.68□□□□□ -1.02
USF1-206ENST00000491629 OR10J3Q5JRS4 329 aa8.68□□□□□ -1.02
USF1-206ENST00000491629 DPPA3Q6W0C5 159 aa8.68□□□□□ -1.02
USF1-206ENST00000491629 SH2D6Q7Z4S9 175 aa8.68□□□□□ -1.02
USF1-206ENST00000491629 AQP10Q96PS8 301 aa8.68□□□□□ -1.02
USF1-206ENST00000491629 NPCDR1Q9BY65 106 aa8.68□□□□□ -1.02
USF1-206ENST00000491629 NMES1Q9C002 83 aa8.68□□□□□ -1.02
USF1-206ENST00000491629 LRP2P98164 4655 aa8.68□□□□□ -1.02
USF1-206ENST00000491629 RNF213Q63HN8 5207 aa8.67□□□□□ -1.02
USF1-206ENST00000491629 TRGV11A0A075B6L2 103 aa8.67□□□□□ -1.02
USF1-206ENST00000491629 TRAV8-6A0A0B4J262 113 aa8.67□□□□□ -1.02
USF1-206ENST00000491629 M0R2P5 195 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms