RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 LINC00467Q9BRT7 94 aa9.78□□□□□ -0.84
CDK9-204ENST00000491521 V9GYV3 84 aa9.78□□□□□ -0.84
CDK9-204ENST00000491521 DNAH10Q8IVF4 4471 aa9.78□□□□□ -0.84
CDK9-204ENST00000491521 TYMSP04818 313 aa9.77□□□□□ -0.85
CDK9-204ENST00000491521 AZU1P20160 251 aa9.77□□□□□ -0.85
CDK9-204ENST00000491521 ASIPP42127 132 aa9.77□□□□□ -0.85
CDK9-204ENST00000491521 TDRG1Q3Y452 100 aa9.77□□□□□ -0.85
CDK9-204ENST00000491521 Q6ZTC4 211 aa9.77□□□□□ -0.85
CDK9-204ENST00000491521 TPPP3Q9BW30 176 aa9.77□□□□□ -0.85
CDK9-204ENST00000491521 CTDSP1Q9GZU7 261 aa9.77□□□□□ -0.85
CDK9-204ENST00000491521 CELA1Q9UNI1 258 aa9.77□□□□□ -0.85
CDK9-204ENST00000491521 SMIM9A6NGZ8 99 aa9.76□□□□□ -0.85
CDK9-204ENST00000491521 EMP1P54849 157 aa9.76□□□□□ -0.85
CDK9-204ENST00000491521 TCL1AP56279 114 aa9.76□□□□□ -0.85
CDK9-204ENST00000491521 IGHV3-16A0A0C4DH30 117 aa9.75□□□□□ -0.85
CDK9-204ENST00000491521 SSTP61278 116 aa9.75□□□□□ -0.85
CDK9-204ENST00000491521 ZNF415Q09FC8 603 aa9.75□□□□□ -0.85
CDK9-204ENST00000491521 CT83Q5H943 113 aa9.75□□□□□ -0.85
CDK9-204ENST00000491521 LGALS9CQ6DKI2 356 aa9.75□□□□□ -0.85
CDK9-204ENST00000491521 ATRAIDQ6UW56 229 aa9.75□□□□□ -0.85
CDK9-204ENST00000491521 TSKUQ8WUA8 353 aa9.75□□□□□ -0.85
CDK9-204ENST00000491521 NEU1Q99519 415 aa9.75□□□□□ -0.85
CDK9-204ENST00000491521 GSN-AS1Q9NRJ2 163 aa9.75□□□□□ -0.85
CDK9-204ENST00000491521 IL36BQ9NZH7 164 aa9.75□□□□□ -0.85
CDK9-204ENST00000491521 MDFICQ9P1T7 246 aa9.75□□□□□ -0.85
CDK9-204ENST00000491521 A0A087WWC5 75 aa9.74□□□□□ -0.85
CDK9-204ENST00000491521 TRAV10A0A0B4J240 114 aa9.74□□□□□ -0.85
CDK9-204ENST00000491521 SNURFLB1AK76 121 aa9.74□□□□□ -0.85
CDK9-204ENST00000491521 H3BVH4 76 aa9.74□□□□□ -0.85
CDK9-204ENST00000491521 ARMS2P0C7Q2 107 aa9.74□□□□□ -0.85
CDK9-204ENST00000491521 ZNF493Q6ZR52 646 aa9.74□□□□□ -0.85
CDK9-204ENST00000491521 FER1L6-AS1Q8NA97 138 aa9.74□□□□□ -0.85
CDK9-204ENST00000491521 TMEM263Q8WUH6 116 aaKnown RBP9.74□□□□□ -0.85
CDK9-204ENST00000491521 C16orf74Q96GX8 76 aa9.74□□□□□ -0.85
CDK9-204ENST00000491521 DNAH6Q9C0G6 4158 aa9.74□□□□□ -0.85
CDK9-204ENST00000491521 A0A1W2PPQ1 181 aa9.73□□□□□ -0.85
CDK9-204ENST00000491521 CXCL1P09341 107 aa9.73□□□□□ -0.85
CDK9-204ENST00000491521 S100PP25815 95 aa9.73□□□□□ -0.85
CDK9-204ENST00000491521 LYZL1Q6UWQ5 148 aa9.73□□□□□ -0.85
CDK9-204ENST00000491521 ZNF575Q86XF7 245 aa9.73□□□□□ -0.85
CDK9-204ENST00000491521 PGLYRP4Q96LB8 373 aa9.73□□□□□ -0.85
CDK9-204ENST00000491521 PHLDA3Q9Y5J5 127 aa9.73□□□□□ -0.85
CDK9-204ENST00000491521 MUC21A0A0G2JKD1 596 aa9.72□□□□□ -0.85
CDK9-204ENST00000491521 MUC21A0A140T8X8 626 aa9.72□□□□□ -0.85
CDK9-204ENST00000491521 SMIM27A0A1W2PRY6 76 aa9.72□□□□□ -0.85
CDK9-204ENST00000491521 FAM3BP58499 235 aaPredicted RBP9.72□□□□□ -0.85
CDK9-204ENST00000491521 C12orf74Q32Q52 190 aa9.72□□□□□ -0.85
CDK9-204ENST00000491521 DNLZQ5SXM8 178 aa9.72□□□□□ -0.85
CDK9-204ENST00000491521 KCNIP4Q6PIL6 250 aa9.72□□□□□ -0.85
CDK9-204ENST00000491521 RNASE8Q8TDE3 154 aaKnown RBP9.72□□□□□ -0.85
CDK9-204ENST00000491521 GTSF1Q8WW33 167 aa9.72□□□□□ -0.85
CDK9-204ENST00000491521 BORCS7Q96B45 105 aa9.72□□□□□ -0.85
CDK9-204ENST00000491521 SPXQ9BT56 116 aa9.72□□□□□ -0.85
CDK9-204ENST00000491521 GFRA4Q9GZZ7 299 aa9.72□□□□□ -0.85
CDK9-204ENST00000491521 TMEM242Q9NWH2 141 aa9.72□□□□□ -0.85
CDK9-204ENST00000491521 NAT8BQ9UHF3 227 aa9.72□□□□□ -0.85
CDK9-204ENST00000491521 APLNQ9ULZ1 77 aa9.72□□□□□ -0.85
CDK9-204ENST00000491521 IGHV4-4A0A075B6R2 117 aa9.71□□□□□ -0.86
CDK9-204ENST00000491521 DEFB131BA0A096LNP1 70 aa9.71□□□□□ -0.86
CDK9-204ENST00000491521 FAM231BA6NCW3 169 aa9.71□□□□□ -0.86
CDK9-204ENST00000491521 HIGD1CA8MV81 97 aa9.71□□□□□ -0.86
CDK9-204ENST00000491521 F2Z2F3 143 aa9.71□□□□□ -0.86
CDK9-204ENST00000491521 SPINK4O60575 86 aa9.71□□□□□ -0.86
CDK9-204ENST00000491521 IGLC6P0CF74 106 aa9.71□□□□□ -0.86
CDK9-204ENST00000491521 RNASE3P12724 160 aaKnown RBP9.71□□□□□ -0.86
CDK9-204ENST00000491521 SPANXN1Q5VSR9 72 aa9.71□□□□□ -0.86
CDK9-204ENST00000491521 C11orf72Q8NBR9 251 aa9.71□□□□□ -0.86
CDK9-204ENST00000491521 NOP10Q9NPE3 64 aaKnown RBP9.71□□□□□ -0.86
CDK9-204ENST00000491521 M0R381 172 aa9.7□□□□□ -0.86
CDK9-204ENST00000491521 OR5AL1P0C617 328 aa9.7□□□□□ -0.86
CDK9-204ENST00000491521 MED14OSP0DP75 135 aa9.7□□□□□ -0.86
CDK9-204ENST00000491521 FOXA3P55318 350 aaPredicted RBP9.7□□□□□ -0.86
CDK9-204ENST00000491521 SYT8Q8NBV8 401 aa9.7□□□□□ -0.86
CDK9-204ENST00000491521 NUP35Q8NFH5 326 aa9.7□□□□□ -0.86
CDK9-204ENST00000491521 C9orf85Q96MD7 179 aa9.7□□□□□ -0.86
CDK9-204ENST00000491521 IMMP2LQ96T52 175 aa9.7□□□□□ -0.86
CDK9-204ENST00000491521 URGCP-MRPS24S4R325 110 aa9.7□□□□□ -0.86
CDK9-204ENST00000491521 M0R2P5 195 aa9.69□□□□□ -0.86
CDK9-204ENST00000491521 SNAI2O43623 268 aa9.69□□□□□ -0.86
CDK9-204ENST00000491521 TCTAP57738 103 aa9.69□□□□□ -0.86
CDK9-204ENST00000491521 CACNG7P62955 275 aa9.69□□□□□ -0.86
CDK9-204ENST00000491521 ZNF876PQ49A33 203 aa9.69□□□□□ -0.86
CDK9-204ENST00000491521 OR10AG1Q8NH19 301 aa9.69□□□□□ -0.86
CDK9-204ENST00000491521 SSBP4Q9BWG4 385 aaPredicted RBP9.69□□□□□ -0.86
CDK9-204ENST00000491521 SMCO4Q9NRQ5 59 aa9.69□□□□□ -0.86
CDK9-204ENST00000491521 TRGV1A0A0A0MS02 117 aa9.68□□□□□ -0.86
CDK9-204ENST00000491521 SPART-AS1P0CW21 52 aa9.68□□□□□ -0.86
CDK9-204ENST00000491521 HTN3P15516 51 aa9.68□□□□□ -0.86
CDK9-204ENST00000491521 DAZ2Q13117 558 aaKnown RBP9.68□□□□□ -0.86
CDK9-204ENST00000491521 TWIST1Q15672 202 aa9.68□□□□□ -0.86
CDK9-204ENST00000491521 TMEM88Q6PEY1 159 aa9.68□□□□□ -0.86
CDK9-204ENST00000491521 ZFP82Q8N141 532 aa9.68□□□□□ -0.86
CDK9-204ENST00000491521 SCRT2Q9NQ03 307 aa9.68□□□□□ -0.86
CDK9-204ENST00000491521 MRPL16Q9NX20 251 aaKnown RBP9.68□□□□□ -0.86
CDK9-204ENST00000491521 A0A1B0GUT8 65 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 GAGE12BA1L429 117 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 PLAC8L1A1L4L8 177 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 SCO1O75880 301 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 GAGE7O76087 117 aa9.67□□□□□ -0.86
CDK9-204ENST00000491521 GAGE12FP0CL80 117 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms