RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 KLLNB2CW77 178 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 D6R8Y8 96 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 PRB4P10163 310 aaPredicted RBP8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 TSPOP30536 169 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 SYNJ2BPP57105 145 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 LBHQ53QV2 105 aaPredicted RBP8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 SAMD5Q5TGI4 173 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 MRPL52Q86TS9 123 aaKnown RBP8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 AMN1Q8IY45 258 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 DEFB125Q8N687 156 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 Q8N976 141 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 OR10AG1Q8NH19 301 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 NDUFAF3Q9BU61 184 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 PRO1933Q9H354 126 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 C11orf21Q9P2W6 132 aa8.94□□□□□ -0.98
SRGAP3-210ENST00000491467 IGHV1-24A0A0C4DH33 117 aa8.93□□□□□ -0.98
SRGAP3-210ENST00000491467 ASIPP42127 132 aa8.93□□□□□ -0.98
SRGAP3-210ENST00000491467 EBLN2Q6P2I7 272 aa8.93□□□□□ -0.98
SRGAP3-210ENST00000491467 PET117Q6UWS5 81 aa8.93□□□□□ -0.98
SRGAP3-210ENST00000491467 RNF185Q96GF1 192 aa8.93□□□□□ -0.98
SRGAP3-210ENST00000491467 MAP1LC3CQ9BXW4 147 aa8.93□□□□□ -0.98
SRGAP3-210ENST00000491467 MAP1LC3AQ9H492 121 aa8.93□□□□□ -0.98
SRGAP3-210ENST00000491467 NXT2Q9NPJ8 142 aaKnown RBP8.93□□□□□ -0.98
SRGAP3-210ENST00000491467 DNAH9Q9NYC9 4486 aa8.93□□□□□ -0.98
SRGAP3-210ENST00000491467 A0A0J9YX75 114 aa8.92□□□□□ -0.98
SRGAP3-210ENST00000491467 DNAJC9-AS1A6NH13 148 aa8.92□□□□□ -0.98
SRGAP3-210ENST00000491467 SPANXN1Q5VSR9 72 aa8.92□□□□□ -0.98
SRGAP3-210ENST00000491467 Q6ZSV7 163 aa8.92□□□□□ -0.98
SRGAP3-210ENST00000491467 SPATA12Q7Z6I5 190 aa8.92□□□□□ -0.98
SRGAP3-210ENST00000491467 OR1N2Q8NGR9 330 aa8.92□□□□□ -0.98
SRGAP3-210ENST00000491467 MRAP2Q96G30 205 aa8.92□□□□□ -0.98
SRGAP3-210ENST00000491467 C16orf95Q9H693 158 aa8.92□□□□□ -0.98
SRGAP3-210ENST00000491467 PPP1R17O96001 155 aa8.91□□□□□ -0.98
SRGAP3-210ENST00000491467 S100A4P26447 101 aaKnown RBP8.91□□□□□ -0.98
SRGAP3-210ENST00000491467 RNASE4P34096 147 aaKnown RBP8.91□□□□□ -0.98
SRGAP3-210ENST00000491467 TCTEX1D4Q5JR98 221 aa8.91□□□□□ -0.98
SRGAP3-210ENST00000491467 PRR9Q5T870 116 aa8.91□□□□□ -0.98
SRGAP3-210ENST00000491467 FOXI2Q6ZQN5 318 aa8.91□□□□□ -0.98
SRGAP3-210ENST00000491467 MIEN1Q9BRT3 115 aa8.91□□□□□ -0.98
SRGAP3-210ENST00000491467 SCRT2Q9NQ03 307 aa8.91□□□□□ -0.98
SRGAP3-210ENST00000491467 SIGLEC8Q9NYZ4 499 aa8.91□□□□□ -0.98
SRGAP3-210ENST00000491467 IGKV3-7A0A075B6H7 116 aa8.9□□□□□ -0.98
SRGAP3-210ENST00000491467 SYS1-DBNDD2H3BUS1 97 aa8.9□□□□□ -0.98
SRGAP3-210ENST00000491467 CSN3P07498 182 aa8.9□□□□□ -0.98
SRGAP3-210ENST00000491467 CD33P20138 364 aa8.9□□□□□ -0.98
SRGAP3-210ENST00000491467 IFI27P40305 119 aaPredicted RBP8.9□□□□□ -0.98
SRGAP3-210ENST00000491467 TDRG1Q3Y452 100 aa8.9□□□□□ -0.98
SRGAP3-210ENST00000491467 ANXA2RQ3ZCQ2 193 aa8.9□□□□□ -0.98
SRGAP3-210ENST00000491467 CASC10Q5T4H9 136 aa8.9□□□□□ -0.98
SRGAP3-210ENST00000491467 FAM159AQ6UWV7 190 aa8.9□□□□□ -0.98
SRGAP3-210ENST00000491467 WFDC3Q8IUB2 231 aa8.9□□□□□ -0.98
SRGAP3-210ENST00000491467 MSRB1Q9NZV6 116 aa8.9□□□□□ -0.98
SRGAP3-210ENST00000491467 TRAV9-2A0A087WT02 112 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 TRAV25A0A0B4J276 109 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 C7orf71A4D174 169 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 A8MTW9 85 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 F6UB75 175 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 K7EMI3 77 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 NPYP01303 97 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 RNASE1P07998 156 aaKnown RBP8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 DEFB121Q5J5C9 76 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 PSMG4Q5JS54 123 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 OR11H1Q8NG94 326 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 OR9G4Q8NGQ1 327 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 C14orf144Q96I85 54 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 DPH3P1Q9H4G8 78 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 RNF114Q9Y508 228 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 PHLDA3Q9Y5J5 127 aa8.89□□□□□ -0.99
SRGAP3-210ENST00000491467 DNAH3Q8TD57 4116 aa8.88□□□□□ -0.99
SRGAP3-210ENST00000491467 MUC21A0A0G2JKD1 596 aa8.88□□□□□ -0.99
SRGAP3-210ENST00000491467 MUC21A0A140T8X8 626 aa8.88□□□□□ -0.99
SRGAP3-210ENST00000491467 H3BVH4 76 aa8.88□□□□□ -0.99
SRGAP3-210ENST00000491467 NXPH4O95158 308 aa8.88□□□□□ -0.99
SRGAP3-210ENST00000491467 TNFRSF6BO95407 300 aa8.88□□□□□ -0.99
SRGAP3-210ENST00000491467 HBDP02042 147 aa8.88□□□□□ -0.99
SRGAP3-210ENST00000491467 ZNF688P0C7X2 276 aa8.88□□□□□ -0.99
SRGAP3-210ENST00000491467 CDKN1BP46527 198 aa8.88□□□□□ -0.99
SRGAP3-210ENST00000491467 MUC21Q5SSG8 566 aa8.88□□□□□ -0.99
SRGAP3-210ENST00000491467 Q8N8P6 123 aa8.88□□□□□ -0.99
SRGAP3-210ENST00000491467 M0R381 172 aa8.87□□□□□ -0.99
SRGAP3-210ENST00000491467 EDN2P20800 178 aa8.87□□□□□ -0.99
SRGAP3-210ENST00000491467 SLURP1P55000 103 aa8.87□□□□□ -0.99
SRGAP3-210ENST00000491467 CMC4P56277 68 aaPredicted RBP8.87□□□□□ -0.99
SRGAP3-210ENST00000491467 SSTP61278 116 aa8.87□□□□□ -0.99
SRGAP3-210ENST00000491467 SPATA45Q537H7 98 aa8.87□□□□□ -0.99
SRGAP3-210ENST00000491467 POM121L12Q8N7R1 296 aa8.87□□□□□ -0.99
SRGAP3-210ENST00000491467 KLHL30-AS1Q8NEE0 82 aa8.87□□□□□ -0.99
SRGAP3-210ENST00000491467 OR2K2Q8NGT1 345 aa8.87□□□□□ -0.99
SRGAP3-210ENST00000491467 CLUHP3Q96NS8 147 aa8.87□□□□□ -0.99
SRGAP3-210ENST00000491467 LOC389332A0A1B0GUA5 103 aa8.86□□□□□ -0.99
SRGAP3-210ENST00000491467 EVI2AP22794 236 aa8.86□□□□□ -0.99
SRGAP3-210ENST00000491467 FCER1GP30273 86 aa8.86□□□□□ -0.99
SRGAP3-210ENST00000491467 KRTAP10-3P60369 221 aa8.86□□□□□ -0.99
SRGAP3-210ENST00000491467 LINC01545Q5VT33 79 aa8.86□□□□□ -0.99
SRGAP3-210ENST00000491467 ADAMTSL5Q6ZMM2 481 aa8.86□□□□□ -0.99
SRGAP3-210ENST00000491467 ZNF705AQ6ZN79 300 aaPredicted RBP8.86□□□□□ -0.99
SRGAP3-210ENST00000491467 AP1S3Q96PC3 154 aa8.86□□□□□ -0.99
SRGAP3-210ENST00000491467 C20orf78Q9BR46 151 aa8.86□□□□□ -0.99
SRGAP3-210ENST00000491467 UQCR10Q9UDW1 63 aa8.86□□□□□ -0.99
SRGAP3-210ENST00000491467 PAM16Q9Y3D7 125 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms