RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 FBLL1A6NHQ2 334 aaKnown RBP5.63□□□□□ -1.51
LSM2-213ENST00000491421 H0Y8G0 127 aa5.63□□□□□ -1.51
LSM2-213ENST00000491421 LCE2BO14633 110 aa5.63□□□□□ -1.51
LSM2-213ENST00000491421 IGLV2-11P01706 119 aa5.63□□□□□ -1.51
LSM2-213ENST00000491421 PFN1P07737 140 aaKnown RBP5.63□□□□□ -1.51
LSM2-213ENST00000491421 ZNF80P51504 273 aaPredicted RBP5.63□□□□□ -1.51
LSM2-213ENST00000491421 ZNF876PQ49A33 203 aa5.63□□□□□ -1.51
LSM2-213ENST00000491421 SMUG1Q53HV7 270 aa5.63□□□□□ -1.51
LSM2-213ENST00000491421 Q6ZRN7 208 aaPredicted RBP5.63□□□□□ -1.51
LSM2-213ENST00000491421 SH2D6Q7Z4S9 175 aa5.63□□□□□ -1.51
LSM2-213ENST00000491421 NFE4Q86UQ8 179 aa5.63□□□□□ -1.51
LSM2-213ENST00000491421 WFDC10BQ8IUB3 73 aa5.63□□□□□ -1.51
LSM2-213ENST00000491421 TMEM75Q8N9X5 138 aa5.63□□□□□ -1.51
LSM2-213ENST00000491421 OR2T35Q8NGX2 323 aa5.63□□□□□ -1.51
LSM2-213ENST00000491421 C11orf21Q9P2W6 132 aa5.63□□□□□ -1.51
LSM2-213ENST00000491421 LOC100131303A0A0U1RQF7 123 aa5.62□□□□□ -1.51
LSM2-213ENST00000491421 A0A1W2PRE2 83 aa5.62□□□□□ -1.51
LSM2-213ENST00000491421 IFNA7P01567 189 aa5.62□□□□□ -1.51
LSM2-213ENST00000491421 GATA1P15976 413 aaPredicted RBP5.62□□□□□ -1.51
LSM2-213ENST00000491421 EVI2AP22794 236 aa5.62□□□□□ -1.51
LSM2-213ENST00000491421 TAGLN2P37802 199 aaKnown RBP5.62□□□□□ -1.51
LSM2-213ENST00000491421 PPT1P50897 306 aa5.62□□□□□ -1.51
LSM2-213ENST00000491421 ERVFC1-1P60608 527 aa5.62□□□□□ -1.51
LSM2-213ENST00000491421 ZNF726P1Q15940 193 aa5.62□□□□□ -1.51
LSM2-213ENST00000491421 SAPCD1Q5SSQ6 148 aa5.62□□□□□ -1.51
LSM2-213ENST00000491421 AKR1C8PQ5T2L2 129 aa5.62□□□□□ -1.51
LSM2-213ENST00000491421 MAPKAPK5-AS1Q8N8E1 139 aa5.62□□□□□ -1.51
LSM2-213ENST00000491421 MSRB1Q9NZV6 116 aa5.62□□□□□ -1.51
LSM2-213ENST00000491421 TNFRSF18Q9Y5U5 241 aa5.62□□□□□ -1.51
LSM2-213ENST00000491421 CTXND1A0A1B0GTU2 59 aa5.61□□□□□ -1.51
LSM2-213ENST00000491421 K7EP13 123 aa5.61□□□□□ -1.51
LSM2-213ENST00000491421 RS1O15537 224 aa5.61□□□□□ -1.51
LSM2-213ENST00000491421 APOBP04114 4563 aaKnown RBP5.61□□□□□ -1.51
LSM2-213ENST00000491421 DNAH10OSP0CZ25 163 aa5.61□□□□□ -1.51
LSM2-213ENST00000491421 UBE2G2P60604 165 aa5.61□□□□□ -1.51
LSM2-213ENST00000491421 RGS21Q2M5E4 152 aa5.61□□□□□ -1.51
LSM2-213ENST00000491421 CFAP126Q5VTH2 177 aa5.61□□□□□ -1.51
LSM2-213ENST00000491421 SLC25A29Q8N8R3 303 aa5.61□□□□□ -1.51
LSM2-213ENST00000491421 LINC00479Q96M42 142 aa5.61□□□□□ -1.51
LSM2-213ENST00000491421 C9orf85Q96MD7 179 aa5.61□□□□□ -1.51
LSM2-213ENST00000491421 PRADC1Q9BSG0 188 aa5.61□□□□□ -1.51
LSM2-213ENST00000491421 KRTAP4-5Q9BYR2 181 aa5.61□□□□□ -1.51
LSM2-213ENST00000491421 IGHV3-73A0A0B4J1V6 119 aa5.6□□□□□ -1.51
LSM2-213ENST00000491421 PEX7O00628 323 aa5.6□□□□□ -1.51
LSM2-213ENST00000491421 ARPC5O15511 151 aa5.6□□□□□ -1.51
LSM2-213ENST00000491421 CRYGDP07320 174 aa5.6□□□□□ -1.51
LSM2-213ENST00000491421 FGF8P55075 233 aaPredicted RBP5.6□□□□□ -1.51
LSM2-213ENST00000491421 TIRAPP58753 221 aa5.6□□□□□ -1.51
LSM2-213ENST00000491421 RHOHQ15669 191 aa5.6□□□□□ -1.51
LSM2-213ENST00000491421 ZNF506Q5JVG8 444 aa5.6□□□□□ -1.51
LSM2-213ENST00000491421 DPPA3Q6W0C5 159 aa5.6□□□□□ -1.51
LSM2-213ENST00000491421 Q86TA4 180 aa5.6□□□□□ -1.51
LSM2-213ENST00000491421 C10orf126Q8N4M7 172 aa5.6□□□□□ -1.51
LSM2-213ENST00000491421 PTH2Q96A98 100 aa5.6□□□□□ -1.51
LSM2-213ENST00000491421 NKX6-2Q9C056 277 aaPredicted RBP5.6□□□□□ -1.51
LSM2-213ENST00000491421 ARL2-SNX15V9GYD0 113 aa5.6□□□□□ -1.51
LSM2-213ENST00000491421 TRAV8-6A0A0B4J262 113 aa5.59□□□□□ -1.51
LSM2-213ENST00000491421 IGHV3-38A0A0C4DH36 116 aa5.59□□□□□ -1.51
LSM2-213ENST00000491421 TRBV6-4A0A1B0GX49 114 aa5.59□□□□□ -1.51
LSM2-213ENST00000491421 MAP1LC3B2A6NCE7 125 aa5.59□□□□□ -1.51
LSM2-213ENST00000491421 FAM74A7A6NL05 159 aa5.59□□□□□ -1.51
LSM2-213ENST00000491421 FABP5P3A8MUU1 101 aa5.59□□□□□ -1.51
LSM2-213ENST00000491421 HSBP1L1C9JCN9 74 aa5.59□□□□□ -1.51
LSM2-213ENST00000491421 G3V3Q6 166 aa5.59□□□□□ -1.51
LSM2-213ENST00000491421 J3QL48 77 aa5.59□□□□□ -1.51
LSM2-213ENST00000491421 MGST1P10620 155 aaKnown RBP5.59□□□□□ -1.51
LSM2-213ENST00000491421 RNASE3P12724 160 aaKnown RBP5.59□□□□□ -1.51
LSM2-213ENST00000491421 S100A4P26447 101 aaKnown RBP5.59□□□□□ -1.51
LSM2-213ENST00000491421 ASIPP42127 132 aa5.59□□□□□ -1.51
LSM2-213ENST00000491421 CDPF1Q6NVV7 123 aa5.59□□□□□ -1.51
LSM2-213ENST00000491421 SLC7A5P1Q8MH63 180 aa5.59□□□□□ -1.51
LSM2-213ENST00000491421 HIST1H2BAQ96A08 127 aa5.59□□□□□ -1.51
LSM2-213ENST00000491421 MAP1LC3BQ9GZQ8 125 aa5.59□□□□□ -1.51
LSM2-213ENST00000491421 A0A087WTM6 91 aa5.58□□□□□ -1.52
LSM2-213ENST00000491421 IGKV3D-20A0A0C4DH25 116 aa5.58□□□□□ -1.52
LSM2-213ENST00000491421 B4DEV8 164 aa5.58□□□□□ -1.52
LSM2-213ENST00000491421 FUSP35637 526 aaKnown RBP eCLIP5.58□□□□□ -1.52
LSM2-213ENST00000491421 LINC01556Q5JQF7 62 aa5.58□□□□□ -1.52
LSM2-213ENST00000491421 OR10J3Q5JRS4 329 aa5.58□□□□□ -1.52
LSM2-213ENST00000491421 Q8N1X5 172 aa5.58□□□□□ -1.52
LSM2-213ENST00000491421 STOML3Q8TAV4 291 aa5.58□□□□□ -1.52
LSM2-213ENST00000491421 CYTL1Q9NRR1 136 aa5.58□□□□□ -1.52
LSM2-213ENST00000491421 A8MWV9 139 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 SMLR1H3BR10 107 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 M0R036 132 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 PSCAO43653 123 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 UBE2G1P62253 170 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 COTL1Q14019 142 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 LGALSLQ3ZCW2 172 aaPredicted RBP5.57□□□□□ -1.52
LSM2-213ENST00000491421 PIK3CD-AS1Q5SR53 167 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 LELP1Q5T871 98 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 ZFP2Q6ZN57 461 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 Q6ZSN1 163 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 ATP6V0E2Q8NHE4 81 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 ZC2HC1AQ96GY0 325 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 FMC1Q96HJ9 113 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 TCEAL7Q9BRU2 100 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 GTSF1LQ9H1H1 148 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 PARLQ9H300 379 aa5.57□□□□□ -1.52
LSM2-213ENST00000491421 SCRT2Q9NQ03 307 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms