RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	IGLV2-11	P01706	119 aa		12.01	□□□□□ -0.49
GGA1-223	ENST00000491295	ATP6V0C	P27449	155 aa		12.01	□□□□□ -0.49
GGA1-223	ENST00000491295	DPPA3	Q6W0C5	159 aa		12.01	□□□□□ -0.49
GGA1-223	ENST00000491295	ATP6V0E2	Q8NHE4	81 aa		12.01	□□□□□ -0.49
GGA1-223	ENST00000491295	TM2D2	Q9BX73	214 aa		12.01	□□□□□ -0.49
GGA1-223	ENST00000491295	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.01	□□□□□ -0.49
GGA1-223	ENST00000491295	PGPEP1L	A6NFU8	196 aa		12	□□□□□ -0.49
GGA1-223	ENST00000491295	RNASE3	P12724	160 aa	Known RBP	12	□□□□□ -0.49
GGA1-223	ENST00000491295	ZNF506	Q5JVG8	444 aa		12	□□□□□ -0.49
GGA1-223	ENST00000491295	ZFP2	Q6ZN57	461 aa		12	□□□□□ -0.49
GGA1-223	ENST00000491295	PRNT	Q86SH4	94 aa		12	□□□□□ -0.49
GGA1-223	ENST00000491295		Q8N814	137 aa		12	□□□□□ -0.49
GGA1-223	ENST00000491295		A0A1W2PRE2	83 aa		11.99	□□□□□ -0.49
GGA1-223	ENST00000491295		A8MWV9	139 aa		11.99	□□□□□ -0.49
GGA1-223	ENST00000491295	GGTLC3	B5MD39	225 aa		11.99	□□□□□ -0.49
GGA1-223	ENST00000491295	C1QB	P02746	253 aa		11.99	□□□□□ -0.49
GGA1-223	ENST00000491295	ALG5	Q9Y673	324 aa		11.99	□□□□□ -0.49
GGA1-223	ENST00000491295	IGHV3-73	A0A0B4J1V6	119 aa		11.98	□□□□□ -0.49
GGA1-223	ENST00000491295	FABP5P3	A8MUU1	101 aa		11.98	□□□□□ -0.49
GGA1-223	ENST00000491295	S100A4	P26447	101 aa	Known RBP	11.97	□□□□□ -0.49
GGA1-223	ENST00000491295	NKX6-2	Q9C056	277 aa	Predicted RBP	11.97	□□□□□ -0.49
GGA1-223	ENST00000491295	MED28	Q9H204	178 aa		11.97	□□□□□ -0.49
GGA1-223	ENST00000491295		Q9HAA7	133 aa		11.97	□□□□□ -0.49
GGA1-223	ENST00000491295		A0A087WWC5	75 aa		11.96	□□□□□ -0.49
GGA1-223	ENST00000491295	TRAV8-3	A0A0A6YYJ7	113 aa		11.96	□□□□□ -0.49
GGA1-223	ENST00000491295	IGHV3-30	P01768	117 aa		11.96	□□□□□ -0.49
GGA1-223	ENST00000491295	IGHV3-33	P01772	117 aa		11.96	□□□□□ -0.49
GGA1-223	ENST00000491295	IGHV3-30-3	P0DP02	117 aa		11.96	□□□□□ -0.49
GGA1-223	ENST00000491295	IGHV3-30-5	P0DP03	117 aa		11.96	□□□□□ -0.49
GGA1-223	ENST00000491295	FGF8	P55075	233 aa	Predicted RBP	11.96	□□□□□ -0.49
GGA1-223	ENST00000491295	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.96	□□□□□ -0.49
GGA1-223	ENST00000491295	SMR3B	P02814	79 aa	Predicted RBP	11.95	□□□□□ -0.5
GGA1-223	ENST00000491295	TOR2A	Q5JU69	321 aa		11.95	□□□□□ -0.5
GGA1-223	ENST00000491295	PARL	Q9H300	379 aa		11.95	□□□□□ -0.5
GGA1-223	ENST00000491295	IL36B	Q9NZH7	164 aa		11.95	□□□□□ -0.5
GGA1-223	ENST00000491295	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.94	□□□□□ -0.5
GGA1-223	ENST00000491295	IGKV3D-20	A0A0C4DH25	116 aa		11.94	□□□□□ -0.5
GGA1-223	ENST00000491295	PTTG1	O95997	202 aa		11.94	□□□□□ -0.5
GGA1-223	ENST00000491295	ASIP	P42127	132 aa		11.94	□□□□□ -0.5
GGA1-223	ENST00000491295	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.94	□□□□□ -0.5
GGA1-223	ENST00000491295	COX11	Q9Y6N1	276 aa		11.94	□□□□□ -0.5
GGA1-223	ENST00000491295	DMBT1	Q9UGM3	2413 aa	Predicted RBP	11.94	□□□□□ -0.5
GGA1-223	ENST00000491295	SRRM2	Q9UQ35	2752 aa	Known RBP	11.93	□□□□□ -0.5
GGA1-223	ENST00000491295	IFNA7	P01567	189 aa		11.93	□□□□□ -0.5
GGA1-223	ENST00000491295	LINC00694	P0DN24	101 aa		11.93	□□□□□ -0.5
GGA1-223	ENST00000491295	DNLZ	Q5SXM8	178 aa		11.93	□□□□□ -0.5
GGA1-223	ENST00000491295		Q6ZSN1	163 aa		11.93	□□□□□ -0.5
GGA1-223	ENST00000491295	HIST1H2BA	Q96A08	127 aa		11.93	□□□□□ -0.5
GGA1-223	ENST00000491295	ARL2-SNX15	V9GYD0	113 aa		11.93	□□□□□ -0.5
GGA1-223	ENST00000491295	CTXND1	A0A1B0GTU2	59 aa		11.92	□□□□□ -0.5
GGA1-223	ENST00000491295	RHOD	O00212	210 aa		11.92	□□□□□ -0.5
GGA1-223	ENST00000491295	GIP	P09681	153 aa	Predicted RBP	11.92	□□□□□ -0.5
GGA1-223	ENST00000491295	SEC11B	P0C7V7	166 aa		11.92	□□□□□ -0.5
GGA1-223	ENST00000491295	SYT8	Q8NBV8	401 aa		11.92	□□□□□ -0.5
GGA1-223	ENST00000491295	LINC00479	Q96M42	142 aa		11.92	□□□□□ -0.5
GGA1-223	ENST00000491295	BATF3	Q9NR55	127 aa		11.92	□□□□□ -0.5
GGA1-223	ENST00000491295	ZFP30	Q9Y2G7	519 aa		11.92	□□□□□ -0.5
GGA1-223	ENST00000491295	TRAV34	A0A0B4J273	112 aa		11.91	□□□□□ -0.5
GGA1-223	ENST00000491295	GAGE12J	A6NER3	117 aa		11.91	□□□□□ -0.5
GGA1-223	ENST00000491295	GAGE1	Q13065	139 aa		11.91	□□□□□ -0.5
GGA1-223	ENST00000491295	GAGE4	Q13068	117 aa		11.91	□□□□□ -0.5
GGA1-223	ENST00000491295	GAGE5	Q13069	117 aa		11.91	□□□□□ -0.5
GGA1-223	ENST00000491295	GAGE13	Q4V321	117 aa		11.91	□□□□□ -0.5
GGA1-223	ENST00000491295	UFSP1	Q6NVU6	142 aa		11.91	□□□□□ -0.5
GGA1-223	ENST00000491295	COX8C	Q7Z4L0	72 aa		11.91	□□□□□ -0.5
GGA1-223	ENST00000491295	VPS13B	Q7Z7G8	4022 aa		11.9	□□□□□ -0.5
GGA1-223	ENST00000491295		B4DEV8	164 aa		11.9	□□□□□ -0.5
GGA1-223	ENST00000491295	PEX7	O00628	323 aa		11.9	□□□□□ -0.5
GGA1-223	ENST00000491295	RPL7L1	Q6DKI1	246 aa	Known RBP	11.9	□□□□□ -0.5
GGA1-223	ENST00000491295	OR2T35	Q8NGX2	323 aa		11.9	□□□□□ -0.5
GGA1-223	ENST00000491295	ZNF726P1	Q15940	193 aa		11.89	□□□□□ -0.51
GGA1-223	ENST00000491295		Q5BKY6	102 aa		11.89	□□□□□ -0.51
GGA1-223	ENST00000491295	DMRTA1	Q5VZB9	504 aa		11.89	□□□□□ -0.51
GGA1-223	ENST00000491295	RMI2	Q96E14	147 aa		11.89	□□□□□ -0.51
GGA1-223	ENST00000491295	URGCP-MRPS24	S4R325	110 aa		11.89	□□□□□ -0.51
GGA1-223	ENST00000491295	FAT1	Q14517	4588 aa		11.88	□□□□□ -0.51
GGA1-223	ENST00000491295	RNF222	A6NCQ9	220 aa		11.88	□□□□□ -0.51
GGA1-223	ENST00000491295	FAM74A7	A6NL05	159 aa		11.88	□□□□□ -0.51
GGA1-223	ENST00000491295	KRBOX1	C9JBD0	128 aa		11.88	□□□□□ -0.51
GGA1-223	ENST00000491295	AKR1C8P	Q5T2L2	129 aa		11.88	□□□□□ -0.51
GGA1-223	ENST00000491295		Q86TA4	180 aa		11.88	□□□□□ -0.51
GGA1-223	ENST00000491295	OR11H4	Q8NGC9	324 aa		11.88	□□□□□ -0.51
GGA1-223	ENST00000491295	TCEAL7	Q9BRU2	100 aa		11.88	□□□□□ -0.51
GGA1-223	ENST00000491295	FAM30A	Q9NZY2	134 aa		11.88	□□□□□ -0.51
GGA1-223	ENST00000491295	ARMS2	P0C7Q2	107 aa		11.87	□□□□□ -0.51
GGA1-223	ENST00000491295	CRIP1	P50238	77 aa		11.87	□□□□□ -0.51
GGA1-223	ENST00000491295	UBE2G2	P60604	165 aa		11.87	□□□□□ -0.51
GGA1-223	ENST00000491295	FAM162B	Q5T6X4	162 aa		11.87	□□□□□ -0.51
GGA1-223	ENST00000491295		Q6ZSA8	131 aa		11.87	□□□□□ -0.51
GGA1-223	ENST00000491295	DAZ4	Q86SG3	579 aa	Known RBP	11.87	□□□□□ -0.51
GGA1-223	ENST00000491295	C14orf178	Q8N769	122 aa	Predicted RBP	11.87	□□□□□ -0.51
GGA1-223	ENST00000491295	FMC1	Q96HJ9	113 aa		11.87	□□□□□ -0.51
GGA1-223	ENST00000491295	SAMD10	Q9BYL1	202 aa		11.87	□□□□□ -0.51
GGA1-223	ENST00000491295	DAZ3	Q9NR90	486 aa	Known RBP	11.87	□□□□□ -0.51
GGA1-223	ENST00000491295	PHLDA3	Q9Y5J5	127 aa		11.87	□□□□□ -0.51
GGA1-223	ENST00000491295	HERC1	Q15751	4861 aa		11.86	□□□□□ -0.51
GGA1-223	ENST00000491295	TRBV6-1	A0A0K0K1D8	114 aa		11.86	□□□□□ -0.51
GGA1-223	ENST00000491295		H3BVH4	76 aa		11.86	□□□□□ -0.51
GGA1-223	ENST00000491295	PLA2G1B	P04054	148 aa	Known RBP	11.86	□□□□□ -0.51
GGA1-223	ENST00000491295	FHIT	P49789	147 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 63 ms