RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 SLC25A16P16260 332 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 PLNP26678 52 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 UQCRFS1P47985 274 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 PRRC2AP48634 2157 aaKnown RBP1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 NMUP48645 174 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 ZNF80P51504 273 aaPredicted RBP1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 UBE2E1P51965 193 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 CRYBA4P53673 196 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 TCTAP57738 103 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 ATP5G2Q06055 141 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 ERCC8Q13216 396 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 SRSF9Q13242 221 aaKnown RBP eCLIP1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 HES1Q14469 280 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 WFDC2Q14508 124 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 TMEM78Q5T7P6 136 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 PCP2Q8IVA1 136 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 Q8N6K4 173 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 POM121L12Q8N7R1 296 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 MAPKAPK5-AS1Q8N8E1 139 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 MAPK1IP1LQ8NDC0 245 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 ATP6V0E2Q8NHE4 81 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 ZNF502Q8TBZ5 544 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 PHLDA1Q8WV24 401 aaPredicted RBP1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 EEF1AKMT3Q96AZ1 226 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 TOMM6Q96B49 74 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 TMEM141Q96I45 108 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 USMG5Q96IX5 58 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 PRAC1Q96KF2 57 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 LINC01600Q96MT4 127 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 SCGB3A1Q96QR1 104 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 METTL26Q96S19 204 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 HIST1H4GQ99525 98 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 SPAG8Q99932 426 aaPredicted RBP1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 TPPP3Q9BW30 176 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 CYSLTR1Q9Y271 337 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 HILPDAQ9Y5L2 63 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 CACNA1GO43497 2377 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 PCNX1Q96RV3 2341 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 UNC80Q8N2C7 3258 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 TMSB15BA0A087X1C1 80 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV7-81A0A0B4J1V7 117 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 IGLV9-49A0A0B4J1Y8 123 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV1-69DA0A0B4J2H0 117 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 KRTAP9-6A8MVA2 160 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 ODF3BA8MYP8 253 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 OR11H12B2RN74 326 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 LYNX1G3V0Z9 82 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 H3BMG7 143 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 K7ENP7 123 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 M0QXV9 152 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 M0R381 172 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 CCL21O00585 134 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 SCGB1C2P0DMR2 95 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 LYNX1P0DP58 116 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 AZU1P20160 251 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 COX7A1P24310 79 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 S100A4P26447 101 aaKnown RBP1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 ID1P41134 155 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 POLR2KP53803 58 aaKnown RBP1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 LOXL1Q08397 574 aaPredicted RBP1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 SCGB2A2Q13296 93 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 PMVKQ15126 192 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 RRN3P1Q2M238 152 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 ADAMTSL4-AS1Q5T5F5 129 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 LYRM7Q5U5X0 104 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 SPANXN1Q5VSR9 72 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 SAMD13Q5VXD3 122 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 CLEC19AQ6UXS0 136 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 IL17RELQ6ZVW7 336 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 NOTCH2NLQ7Z3S9 236 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 VMO1Q7Z5L0 202 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 GPHB5Q86YW7 130 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 DYNAPQ8N1N2 210 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 SLC25A29Q8N8R3 303 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 Q8N9W7 124 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 OR11H1Q8NG94 326 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 OR10J6PQ8NGY7 276 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 OR11H2Q8NH07 326 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 LINC01560Q8TB33 94 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 C18orf15Q96N68 181 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 FOXC2Q99958 501 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 CHAC1Q9BUX1 264 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 DPH3P1Q9H4G8 78 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 MRPL35Q9NZE8 188 aaKnown RBP1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 TP73-AS1Q9UF72 201 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 PRO1854Q9UHT4 67 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 PHLDA3Q9Y5J5 127 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 CEP290O15078 2479 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 PLCE1Q9P212 2302 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 MUC4Q99102 2169 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 USP34Q70CQ2 3546 aa1.52□□□□□ -2.17
SNRNP40-207ENST00000491106 CUL9Q8IWT3 2517 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 TRBV7-3A0A075B6L6 115 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 IGKV2-40A0A087WW87 121 aaPredicted RBP1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 IGKV2D-26A0A0A0MRZ7 120 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 TRAV8-2A0A0B4J237 113 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV7-4-1A0A0J9YVY3 117 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 TRBV6-5A0A0K0K1A5 114 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 TEX48A0A1B0GUV7 120 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms